RNA–Protein interactions for RNA: ENST00000346495.6

TSPAN3-202, Transcript of tetraspanin 3, humanhuman

TSL 2 BASIC

Gene TSPAN3, Length 1,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-202ENST00000346495 ZNF16P17020 682 aaPredicted RBP17.71■□□□□ 0.43
TSPAN3-202ENST00000346495 CXCL2P19875 107 aa17.71■□□□□ 0.43
TSPAN3-202ENST00000346495 GPR12P47775 334 aa17.71■□□□□ 0.43
TSPAN3-202ENST00000346495 TLE4Q04727 773 aa17.71■□□□□ 0.43
TSPAN3-202ENST00000346495 CATR1Q13166 79 aa17.71■□□□□ 0.43
TSPAN3-202ENST00000346495 TMEM155Q4W5P6 130 aa17.71■□□□□ 0.43
TSPAN3-202ENST00000346495 AVPI1Q5T686 147 aa17.71■□□□□ 0.43
TSPAN3-202ENST00000346495 C5orf30Q96GV9 206 aa17.71■□□□□ 0.43
TSPAN3-202ENST00000346495 ABHD14BQ96IU4 210 aa17.71■□□□□ 0.43
TSPAN3-202ENST00000346495 SDHAF2Q9NX18 166 aa17.71■□□□□ 0.43
TSPAN3-202ENST00000346495 TRBV23-1A0A0A0MS06 115 aa17.7■□□□□ 0.42
TSPAN3-202ENST00000346495 PPIHO43447 177 aaKnown RBP17.7■□□□□ 0.42
TSPAN3-202ENST00000346495 PET100P0DJ07 73 aa17.7■□□□□ 0.42
TSPAN3-202ENST00000346495 NFYBP25208 207 aa17.7■□□□□ 0.42
TSPAN3-202ENST00000346495 CDKN1AP38936 164 aa17.7■□□□□ 0.42
TSPAN3-202ENST00000346495 ESCO2Q56NI9 601 aa17.7■□□□□ 0.42
TSPAN3-202ENST00000346495 ZNF66Q6ZN08 573 aa17.7■□□□□ 0.42
TSPAN3-202ENST00000346495 SPIN2AQ99865 258 aa17.7■□□□□ 0.42
TSPAN3-202ENST00000346495 SPIN2BQ9BPZ2 258 aa17.7■□□□□ 0.42
TSPAN3-202ENST00000346495 MIOXQ9UGB7 285 aa17.7■□□□□ 0.42
TSPAN3-202ENST00000346495 RPUSD1Q9UJJ7 312 aaKnown RBP17.7■□□□□ 0.42
TSPAN3-202ENST00000346495 GPR37O15354 613 aa17.69■□□□□ 0.42
TSPAN3-202ENST00000346495 F12P00748 615 aaPredicted RBP17.69■□□□□ 0.42
TSPAN3-202ENST00000346495 VDAC1P21796 283 aa17.69■□□□□ 0.42
TSPAN3-202ENST00000346495 TMEM33P57088 247 aa17.69■□□□□ 0.42
TSPAN3-202ENST00000346495 PRAMEF5Q5TYX0 476 aa17.69■□□□□ 0.42
TSPAN3-202ENST00000346495 TCTEX1D1Q8N7M0 179 aa17.69■□□□□ 0.42
TSPAN3-202ENST00000346495 HSD17B10Q99714 261 aaKnown RBP17.69■□□□□ 0.42
TSPAN3-202ENST00000346495 ABHD14AQ9BUJ0 271 aa17.69■□□□□ 0.42
TSPAN3-202ENST00000346495 MFFQ9GZY8 342 aa17.69■□□□□ 0.42
TSPAN3-202ENST00000346495 MBD2Q9UBB5 411 aa17.69■□□□□ 0.42
TSPAN3-202ENST00000346495 RALYQ9UKM9 306 aaKnown RBP17.69■□□□□ 0.42
TSPAN3-202ENST00000346495 TNFSF18Q9UNG2 199 aa17.69■□□□□ 0.42
TSPAN3-202ENST00000346495 GAB2Q9UQC2 676 aa17.69■□□□□ 0.42
TSPAN3-202ENST00000346495 SSTR2P30874 369 aa17.69■□□□□ 0.42
TSPAN3-202ENST00000346495 RAB32Q13637 225 aa17.69■□□□□ 0.42
TSPAN3-202ENST00000346495 Q3ZCU0 254 aa17.69■□□□□ 0.42
TSPAN3-202ENST00000346495 HEPN1Q6WQI6 88 aa17.69■□□□□ 0.42
TSPAN3-202ENST00000346495 OR8B3Q8NGG8 313 aa17.69■□□□□ 0.42
TSPAN3-202ENST00000346495 OR8B2Q96RD0 313 aa17.69■□□□□ 0.42
TSPAN3-202ENST00000346495 RGS13O14921 159 aa17.68■□□□□ 0.42
TSPAN3-202ENST00000346495 TSC22D2O75157 780 aa17.68■□□□□ 0.42
TSPAN3-202ENST00000346495 CLDN1O95832 211 aa17.68■□□□□ 0.42
TSPAN3-202ENST00000346495 LYL1P12980 280 aa17.68■□□□□ 0.42
TSPAN3-202ENST00000346495 ZNF134P52741 427 aa17.68■□□□□ 0.42
TSPAN3-202ENST00000346495 EFNA4P52798 201 aa17.68■□□□□ 0.42
TSPAN3-202ENST00000346495 PRSS54Q6PEW0 395 aa17.68■□□□□ 0.42
TSPAN3-202ENST00000346495 ZNF841Q6ZN19 808 aa17.68■□□□□ 0.42
TSPAN3-202ENST00000346495 RAB39BQ96DA2 213 aa17.68■□□□□ 0.42
TSPAN3-202ENST00000346495 NEIL1Q96FI4 390 aaPredicted RBP17.68■□□□□ 0.42
TSPAN3-202ENST00000346495 RNF126Q9BV68 326 aa17.68■□□□□ 0.42
TSPAN3-202ENST00000346495 IFI27L2Q9H2X8 130 aa17.68■□□□□ 0.42
TSPAN3-202ENST00000346495 FAM212BQ9NTI7 297 aaPredicted RBP17.68■□□□□ 0.42
TSPAN3-202ENST00000346495 ZFP57Q9NU63 452 aa17.68■□□□□ 0.42
TSPAN3-202ENST00000346495 MMP23AO75900 390 aa17.67■□□□□ 0.42
TSPAN3-202ENST00000346495 CCL3L1P16619 93 aa17.67■□□□□ 0.42
TSPAN3-202ENST00000346495 S100A10P60903 97 aa17.67■□□□□ 0.42
TSPAN3-202ENST00000346495 ZNF585BQ52M93 769 aa17.67■□□□□ 0.42
TSPAN3-202ENST00000346495 NMSQ5H8A3 153 aa17.67■□□□□ 0.42
TSPAN3-202ENST00000346495 CT45A1Q5HYN5 189 aa17.67■□□□□ 0.42
TSPAN3-202ENST00000346495 BTNL3Q6UXE8 466 aa17.67■□□□□ 0.42
TSPAN3-202ENST00000346495 ZNF439Q8NDP4 499 aa17.67■□□□□ 0.42
TSPAN3-202ENST00000346495 CT45A3Q8NHU0 189 aa17.67■□□□□ 0.42
TSPAN3-202ENST00000346495 TCTEX1D2Q8WW35 142 aa17.67■□□□□ 0.42
TSPAN3-202ENST00000346495 LEAP2Q969E1 77 aa17.67■□□□□ 0.42
TSPAN3-202ENST00000346495 YLPM1P49750 1951 aaKnown RBP17.66■□□□□ 0.42
TSPAN3-202ENST00000346495 H0YIZ8 118 aa17.66■□□□□ 0.42
TSPAN3-202ENST00000346495 SLC31A2O15432 143 aa17.66■□□□□ 0.42
TSPAN3-202ENST00000346495 OR2F2O95006 317 aa17.66■□□□□ 0.42
TSPAN3-202ENST00000346495 IGHV3-7P01780 117 aa17.66■□□□□ 0.42
TSPAN3-202ENST00000346495 S100A11P31949 105 aa17.66■□□□□ 0.42
TSPAN3-202ENST00000346495 RPL30P62888 115 aaKnown RBP17.66■□□□□ 0.42
TSPAN3-202ENST00000346495 OR2F1Q13607 317 aa17.66■□□□□ 0.42
TSPAN3-202ENST00000346495 SMCO1Q147U7 214 aa17.66■□□□□ 0.42
TSPAN3-202ENST00000346495 OPCMLQ14982 345 aa17.66■□□□□ 0.42
TSPAN3-202ENST00000346495 THOC7Q6I9Y2 204 aaKnown RBP17.66■□□□□ 0.42
TSPAN3-202ENST00000346495 TMUB2Q71RG4 321 aa17.66■□□□□ 0.42
TSPAN3-202ENST00000346495 ZNF436-AS1Q8NC38 126 aaPredicted RBP17.66■□□□□ 0.42
TSPAN3-202ENST00000346495 DCUN1D4Q92564 292 aa17.66■□□□□ 0.42
TSPAN3-202ENST00000346495 SMG1Q96Q15 3661 aaKnown RBP17.66■□□□□ 0.42
TSPAN3-202ENST00000346495 A0A0D9SG52 128 aa17.65■□□□□ 0.42
TSPAN3-202ENST00000346495 CLEC18AA5D8T8 446 aa17.65■□□□□ 0.42
TSPAN3-202ENST00000346495 OVOL3O00110 214 aa17.65■□□□□ 0.42
TSPAN3-202ENST00000346495 RLN2P04090 185 aa17.65■□□□□ 0.42
TSPAN3-202ENST00000346495 ZNF345Q14585 488 aa17.65■□□□□ 0.42
TSPAN3-202ENST00000346495 ACOT7LQ6ZUV0 252 aa17.65■□□□□ 0.42
TSPAN3-202ENST00000346495 INO80EQ8NBZ0 244 aaPredicted RBP17.65■□□□□ 0.42
TSPAN3-202ENST00000346495 CLEC18CQ8NCF0 446 aa17.65■□□□□ 0.42
TSPAN3-202ENST00000346495 LSM10Q969L4 123 aaKnown RBP17.65■□□□□ 0.42
TSPAN3-202ENST00000346495 SCGB1D2O95969 90 aa17.65■□□□□ 0.42
TSPAN3-202ENST00000346495 IGKV1-39P01597 117 aa17.65■□□□□ 0.42
TSPAN3-202ENST00000346495 IGKV1D-39P04432 117 aa17.65■□□□□ 0.42
TSPAN3-202ENST00000346495 LPAR6P43657 344 aa17.65■□□□□ 0.42
TSPAN3-202ENST00000346495 DLX6P56179 175 aa17.65■□□□□ 0.42
TSPAN3-202ENST00000346495 SRSF1Q07955 248 aaKnown RBP eCLIP17.65■□□□□ 0.42
TSPAN3-202ENST00000346495 UTF1Q5T230 341 aa17.65■□□□□ 0.42
TSPAN3-202ENST00000346495 OR4D5Q8NGN0 318 aa17.65■□□□□ 0.42
TSPAN3-202ENST00000346495 RNASE11Q8TAA1 199 aaKnown RBP17.65■□□□□ 0.42
TSPAN3-202ENST00000346495 ARL6Q9H0F7 186 aa17.65■□□□□ 0.42
TSPAN3-202ENST00000346495 OR5AC2Q9NZP5 309 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms