RNA–Protein interactions for RNA: ENST00000343060.4

HOXA1-201, Transcript of homeobox A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA1, Length 2,517 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1-201ENST00000343060 ZNF705DP0CH99 300 aaPredicted RBP8.19□□□□□ -1.1
HOXA1-201ENST00000343060 ZNF705BP0CI00 300 aaPredicted RBP8.19□□□□□ -1.1
HOXA1-201ENST00000343060 NTF4P34130 210 aa8.19□□□□□ -1.1
HOXA1-201ENST00000343060 CHRNA7P36544 502 aa8.19□□□□□ -1.1
HOXA1-201ENST00000343060 VEGFBP49765 207 aa8.19□□□□□ -1.1
HOXA1-201ENST00000343060 TMEM183BQ1AE95 376 aa8.19□□□□□ -1.1
HOXA1-201ENST00000343060 RIPPLY2Q5TAB7 128 aa8.19□□□□□ -1.1
HOXA1-201ENST00000343060 RAET1LQ5VY80 246 aa8.19□□□□□ -1.1
HOXA1-201ENST00000343060 AGBL5Q8NDL9 886 aa8.19□□□□□ -1.1
HOXA1-201ENST00000343060 FOXB1Q99853 325 aa8.19□□□□□ -1.1
HOXA1-201ENST00000343060 AURKAIP1Q9NWT8 199 aaPredicted RBP8.19□□□□□ -1.1
HOXA1-201ENST00000343060 MTCH1Q9NZJ7 389 aa8.19□□□□□ -1.1
HOXA1-201ENST00000343060 TRAV9-1A0A075B6T8 112 aa8.18□□□□□ -1.1
HOXA1-201ENST00000343060 LNP1A1A4G5 178 aa8.18□□□□□ -1.1
HOXA1-201ENST00000343060 C1QTNF9BB2RNN3 333 aa8.18□□□□□ -1.1
HOXA1-201ENST00000343060 PDE6DO43924 150 aa8.18□□□□□ -1.1
HOXA1-201ENST00000343060 P0C879 139 aa8.18□□□□□ -1.1
HOXA1-201ENST00000343060 PATE4P0C8F1 98 aa8.18□□□□□ -1.1
HOXA1-201ENST00000343060 COX5AP20674 150 aa8.18□□□□□ -1.1
HOXA1-201ENST00000343060 ADMP35318 185 aa8.18□□□□□ -1.1
HOXA1-201ENST00000343060 NXPH1P58417 271 aa8.18□□□□□ -1.1
HOXA1-201ENST00000343060 TPPP2P59282 170 aa8.18□□□□□ -1.1
HOXA1-201ENST00000343060 RAC1P63000 192 aa8.18□□□□□ -1.1
HOXA1-201ENST00000343060 TOMM20LQ6UXN7 152 aa8.18□□□□□ -1.1
HOXA1-201ENST00000343060 Q6ZS52 159 aa8.18□□□□□ -1.1
HOXA1-201ENST00000343060 OR1K1Q8NGR3 316 aa8.18□□□□□ -1.1
HOXA1-201ENST00000343060 DEFB126Q9BYW3 111 aa8.18□□□□□ -1.1
HOXA1-201ENST00000343060 OR2J1Q9GZK6 312 aa8.18□□□□□ -1.1
HOXA1-201ENST00000343060 OPN3Q9H1Y3 402 aaPredicted RBP8.18□□□□□ -1.1
HOXA1-201ENST00000343060 OR51B6Q9H340 312 aa8.18□□□□□ -1.1
HOXA1-201ENST00000343060 PROK2Q9HC23 129 aa8.18□□□□□ -1.1
HOXA1-201ENST00000343060 PARD6AQ9NPB6 346 aa8.18□□□□□ -1.1
HOXA1-201ENST00000343060 CLEC1BQ9P126 229 aa8.18□□□□□ -1.1
HOXA1-201ENST00000343060 HSPB7Q9UBY9 170 aa8.18□□□□□ -1.1
HOXA1-201ENST00000343060 ERRFI1Q9UJM3 462 aaPredicted RBP8.18□□□□□ -1.1
HOXA1-201ENST00000343060 UNC13CQ8NB66 2214 aa8.18□□□□□ -1.1
HOXA1-201ENST00000343060 ZNF716A6NP11 495 aa8.18□□□□□ -1.1
HOXA1-201ENST00000343060 C11orf94C9JXX5 98 aa8.18□□□□□ -1.1
HOXA1-201ENST00000343060 TIAF1O95411 115 aa8.18□□□□□ -1.1
HOXA1-201ENST00000343060 GLB1P16278 677 aa8.18□□□□□ -1.1
HOXA1-201ENST00000343060 SELEP16581 610 aa8.18□□□□□ -1.1
HOXA1-201ENST00000343060 PLA2G5P39877 138 aa8.18□□□□□ -1.1
HOXA1-201ENST00000343060 GNB1P62873 340 aa8.18□□□□□ -1.1
HOXA1-201ENST00000343060 TRIP6Q15654 476 aaKnown RBP8.18□□□□□ -1.1
HOXA1-201ENST00000343060 FFAR4Q5NUL3 377 aa8.18□□□□□ -1.1
HOXA1-201ENST00000343060 FAM180AQ6UWF9 173 aa8.18□□□□□ -1.1
HOXA1-201ENST00000343060 OR56B2PQ8NGI1 322 aa8.18□□□□□ -1.1
HOXA1-201ENST00000343060 NEK7Q8TDX7 302 aa8.18□□□□□ -1.1
HOXA1-201ENST00000343060 RLN3Q8WXF3 142 aa8.18□□□□□ -1.1
HOXA1-201ENST00000343060 CRIM1Q9NZV1 1036 aa8.18□□□□□ -1.1
HOXA1-201ENST00000343060 C19orf25Q9UFG5 118 aaPredicted RBP8.18□□□□□ -1.1
HOXA1-201ENST00000343060 GON4LQ3T8J9 2241 aa8.17□□□□□ -1.1
HOXA1-201ENST00000343060 KIAA0100Q14667 2235 aaKnown RBP8.17□□□□□ -1.1
HOXA1-201ENST00000343060 EPOPA6NHQ4 379 aa8.17□□□□□ -1.1
HOXA1-201ENST00000343060 HMGB3O15347 200 aaKnown RBP8.17□□□□□ -1.1
HOXA1-201ENST00000343060 MPLP40238 635 aa8.17□□□□□ -1.1
HOXA1-201ENST00000343060 COMPP49747 757 aaPredicted RBP8.17□□□□□ -1.1
HOXA1-201ENST00000343060 LHX2P50458 406 aa8.17□□□□□ -1.1
HOXA1-201ENST00000343060 RAC3P60763 192 aa8.17□□□□□ -1.1
HOXA1-201ENST00000343060 TLE1Q04724 770 aa8.17□□□□□ -1.1
HOXA1-201ENST00000343060 CEACAM21Q3KPI0 293 aa8.17□□□□□ -1.1
HOXA1-201ENST00000343060 FBXW9Q5XUX1 488 aa8.17□□□□□ -1.1
HOXA1-201ENST00000343060 MKXQ8IYA7 352 aa8.17□□□□□ -1.1
HOXA1-201ENST00000343060 ARL6IP6Q8N6S5 226 aa8.17□□□□□ -1.1
HOXA1-201ENST00000343060 ALKBH3Q96Q83 286 aaPredicted RBP8.17□□□□□ -1.1
HOXA1-201ENST00000343060 SH2D2AQ9NP31 389 aa8.17□□□□□ -1.1
HOXA1-201ENST00000343060 KCNIP2Q9NS61 270 aa8.17□□□□□ -1.1
HOXA1-201ENST00000343060 PLA2G3Q9NZ20 509 aa8.17□□□□□ -1.1
HOXA1-201ENST00000343060 ABCA7Q8IZY2 2146 aa8.17□□□□□ -1.1
HOXA1-201ENST00000343060 TRAV24A0A0B4J272 114 aa8.17□□□□□ -1.1
HOXA1-201ENST00000343060 GJE1A6NN92 205 aa8.17□□□□□ -1.1
HOXA1-201ENST00000343060 F6UZH7 168 aa8.17□□□□□ -1.1
HOXA1-201ENST00000343060 TRAPPC2LH3BP13 241 aa8.17□□□□□ -1.1
HOXA1-201ENST00000343060 HSPB6O14558 160 aa8.17□□□□□ -1.1
HOXA1-201ENST00000343060 PCP4P48539 62 aa8.17□□□□□ -1.1
HOXA1-201ENST00000343060 OR8G2PQ6IF36 304 aa8.17□□□□□ -1.1
HOXA1-201ENST00000343060 MOB1BQ7L9L4 216 aa8.17□□□□□ -1.1
HOXA1-201ENST00000343060 NUFIP2Q7Z417 695 aaKnown RBP8.17□□□□□ -1.1
HOXA1-201ENST00000343060 ZDHHC23Q8IYP9 409 aa8.17□□□□□ -1.1
HOXA1-201ENST00000343060 RAB1CQ92928 201 aa8.17□□□□□ -1.1
HOXA1-201ENST00000343060 NPCDR1Q9BY65 106 aa8.17□□□□□ -1.1
HOXA1-201ENST00000343060 OR1A1Q9P1Q5 309 aa8.17□□□□□ -1.1
HOXA1-201ENST00000343060 ZFP30Q9Y2G7 519 aa8.17□□□□□ -1.1
HOXA1-201ENST00000343060 SS18L1O75177 396 aaPredicted RBP8.16□□□□□ -1.1
HOXA1-201ENST00000343060 CLDN1O95832 211 aa8.16□□□□□ -1.1
HOXA1-201ENST00000343060 C1QTNF9P0C862 333 aa8.16□□□□□ -1.1
HOXA1-201ENST00000343060 GPM6AP51674 278 aa8.16□□□□□ -1.1
HOXA1-201ENST00000343060 CEACAM16Q2WEN9 425 aa8.16□□□□□ -1.1
HOXA1-201ENST00000343060 TDRG1Q3Y452 100 aa8.16□□□□□ -1.1
HOXA1-201ENST00000343060 NRN1LQ496H8 165 aa8.16□□□□□ -1.1
HOXA1-201ENST00000343060 COL5A1-AS1Q5SY13 56 aa8.16□□□□□ -1.1
HOXA1-201ENST00000343060 SFRP2Q96HF1 295 aa8.16□□□□□ -1.1
HOXA1-201ENST00000343060 GMPPAQ96IJ6 420 aaPredicted RBP8.16□□□□□ -1.1
HOXA1-201ENST00000343060 VAMP8Q9BV40 100 aa8.16□□□□□ -1.1
HOXA1-201ENST00000343060 MMP23AO75900 390 aa8.15□□□□□ -1.1
HOXA1-201ENST00000343060 CCL3P10147 92 aa8.15□□□□□ -1.1
HOXA1-201ENST00000343060 CDC34P49427 236 aaPredicted RBP8.15□□□□□ -1.1
HOXA1-201ENST00000343060 B3GALT5-AS1P59052 145 aa8.15□□□□□ -1.1
HOXA1-201ENST00000343060 TFF3Q07654 80 aa8.15□□□□□ -1.1
HOXA1-201ENST00000343060 PCOLCEQ15113 449 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms