RNA–Protein interactions for RNA: ENST00000341472.9

SYNE2-201, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 1,132 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-201ENST00000341472 SLC23A1Q9UHI7 598 aa15.85■□□□□ 0.13
SYNE2-201ENST00000341472 MGAT4AQ9UM21 535 aa15.85■□□□□ 0.13
SYNE2-201ENST00000341472 FOXI3A8MTJ6 420 aaPredicted RBP15.84■□□□□ 0.13
SYNE2-201ENST00000341472 PDCD5O14737 125 aa15.84■□□□□ 0.13
SYNE2-201ENST00000341472 RAB29O14966 203 aa15.84■□□□□ 0.13
SYNE2-201ENST00000341472 ST8SIA5O15466 376 aa15.84■□□□□ 0.13
SYNE2-201ENST00000341472 CEACAM6P40199 344 aa15.84■□□□□ 0.13
SYNE2-201ENST00000341472 ALDH3B2P48448 385 aa15.84■□□□□ 0.13
SYNE2-201ENST00000341472 FOXE3Q13461 319 aa15.84■□□□□ 0.13
SYNE2-201ENST00000341472 MMDQ15546 238 aa15.84■□□□□ 0.13
SYNE2-201ENST00000341472 CXorf66Q5JRM2 361 aaPredicted RBP15.84■□□□□ 0.13
SYNE2-201ENST00000341472 KLHL30-AS1Q8NEE0 82 aa15.84■□□□□ 0.13
SYNE2-201ENST00000341472 OR56B1Q8NGI3 324 aa15.84■□□□□ 0.13
SYNE2-201ENST00000341472 ARHGAP5-AS1Q96IT6 56 aa15.84■□□□□ 0.13
SYNE2-201ENST00000341472 HSPB9Q9BQS6 159 aa15.84■□□□□ 0.13
SYNE2-201ENST00000341472 HDHD3Q9BSH5 251 aaPredicted RBP15.84■□□□□ 0.13
SYNE2-201ENST00000341472 IFI27L2Q9H2X8 130 aa15.84■□□□□ 0.13
SYNE2-201ENST00000341472 ZNF107Q9UII5 783 aaPredicted RBP15.84■□□□□ 0.13
SYNE2-201ENST00000341472 RAB22AQ9UL26 194 aa15.84■□□□□ 0.13
SYNE2-201ENST00000341472 SAA2-SAA4A0A096LPE2 208 aa15.83■□□□□ 0.12
SYNE2-201ENST00000341472 ELANEP08246 267 aa15.83■□□□□ 0.12
SYNE2-201ENST00000341472 SAA2P0DJI9 122 aaPredicted RBP15.83■□□□□ 0.12
SYNE2-201ENST00000341472 VDAC1P21796 283 aa15.83■□□□□ 0.12
SYNE2-201ENST00000341472 SSX1Q16384 188 aa15.83■□□□□ 0.12
SYNE2-201ENST00000341472 HES5Q5TA89 166 aa15.83■□□□□ 0.12
SYNE2-201ENST00000341472 ETV3LQ6ZN32 361 aa15.83■□□□□ 0.12
SYNE2-201ENST00000341472 CMSS1Q9BQ75 279 aaKnown RBP15.83■□□□□ 0.12
SYNE2-201ENST00000341472 PECRQ9BY49 303 aa15.83■□□□□ 0.12
SYNE2-201ENST00000341472 GHITMQ9H3K2 345 aa15.83■□□□□ 0.12
SYNE2-201ENST00000341472 Q9N2K0 584 aa15.83■□□□□ 0.12
SYNE2-201ENST00000341472 TRAV1-2A0A0B4J238 106 aa15.82■□□□□ 0.12
SYNE2-201ENST00000341472 ITGB1BP1O14713 200 aa15.82■□□□□ 0.12
SYNE2-201ENST00000341472 LDLRAD4O15165 306 aa15.82■□□□□ 0.12
SYNE2-201ENST00000341472 HSPA12AO43301 675 aa15.82■□□□□ 0.12
SYNE2-201ENST00000341472 IGF1P05019 195 aa15.82■□□□□ 0.12
SYNE2-201ENST00000341472 RPLP1P05386 114 aaKnown RBP15.82■□□□□ 0.12
SYNE2-201ENST00000341472 SLC2A2P11168 524 aaPredicted RBP15.82■□□□□ 0.12
SYNE2-201ENST00000341472 ZBTB25P24278 435 aa15.82■□□□□ 0.12
SYNE2-201ENST00000341472 FAM71F2Q6NXP2 309 aa15.82■□□□□ 0.12
SYNE2-201ENST00000341472 CHCHD6Q9BRQ6 235 aa15.82■□□□□ 0.12
SYNE2-201ENST00000341472 GPR61Q9BZJ8 451 aa15.82■□□□□ 0.12
SYNE2-201ENST00000341472 C12orf4Q9NQ89 552 aa15.82■□□□□ 0.12
SYNE2-201ENST00000341472 TMEM272A0A1B0GTI8 110 aa15.81■□□□□ 0.12
SYNE2-201ENST00000341472 TRDV1A0A1B0GX56 115 aa15.81■□□□□ 0.12
SYNE2-201ENST00000341472 IGHG4P01861 327 aa15.81■□□□□ 0.12
SYNE2-201ENST00000341472 SCTP09683 121 aa15.81■□□□□ 0.12
SYNE2-201ENST00000341472 OR5H8P0DN80 308 aa15.81■□□□□ 0.12
SYNE2-201ENST00000341472 HLA-DRB3P79483 266 aa15.81■□□□□ 0.12
SYNE2-201ENST00000341472 PLAC9Q5JTB6 97 aa15.81■□□□□ 0.12
SYNE2-201ENST00000341472 LIN54Q6MZP7 749 aa15.81■□□□□ 0.12
SYNE2-201ENST00000341472 LCNL1Q6ZST4 164 aa15.81■□□□□ 0.12
SYNE2-201ENST00000341472 GPR141Q7Z602 305 aa15.81■□□□□ 0.12
SYNE2-201ENST00000341472 RNF152Q8N8N0 203 aa15.81■□□□□ 0.12
SYNE2-201ENST00000341472 NPBQ8NG41 125 aa15.81■□□□□ 0.12
SYNE2-201ENST00000341472 EDARADDQ8WWZ3 215 aa15.81■□□□□ 0.12
SYNE2-201ENST00000341472 KCTD7Q96MP8 289 aa15.81■□□□□ 0.12
SYNE2-201ENST00000341472 P2RX4Q99571 388 aa15.81■□□□□ 0.12
SYNE2-201ENST00000341472 MCRIP2Q9BUT9 160 aaKnown RBP15.81■□□□□ 0.12
SYNE2-201ENST00000341472 PARP12Q9H0J9 701 aaKnown RBP15.81■□□□□ 0.12
SYNE2-201ENST00000341472 C11orf54Q9H0W9 315 aaPredicted RBP15.81■□□□□ 0.12
SYNE2-201ENST00000341472 NDUFB11Q9NX14 153 aa15.81■□□□□ 0.12
SYNE2-201ENST00000341472 ZNF580Q9UK33 172 aa15.81■□□□□ 0.12
SYNE2-201ENST00000341472 TRDCB7Z8K6 153 aa15.8■□□□□ 0.12
SYNE2-201ENST00000341472 CCL24O00175 119 aa15.8■□□□□ 0.12
SYNE2-201ENST00000341472 NBR2O15453 112 aa15.8■□□□□ 0.12
SYNE2-201ENST00000341472 CT45A6P0DMU7 189 aa15.8■□□□□ 0.12
SYNE2-201ENST00000341472 CT45A5P0DMU8 189 aa15.8■□□□□ 0.12
SYNE2-201ENST00000341472 CT45A7P0DMV0 189 aa15.8■□□□□ 0.12
SYNE2-201ENST00000341472 MYL9P24844 172 aa15.8■□□□□ 0.12
SYNE2-201ENST00000341472 CNTFRP26992 372 aa15.8■□□□□ 0.12
SYNE2-201ENST00000341472 MC5RP33032 325 aa15.8■□□□□ 0.12
SYNE2-201ENST00000341472 CDX1P47902 265 aaPredicted RBP15.8■□□□□ 0.12
SYNE2-201ENST00000341472 CFHR3Q02985 330 aa15.8■□□□□ 0.12
SYNE2-201ENST00000341472 KIR2DS1Q14954 304 aa15.8■□□□□ 0.12
SYNE2-201ENST00000341472 C5orf64Q2M2E5 130 aa15.8■□□□□ 0.12
SYNE2-201ENST00000341472 RPL39P5Q59GN2 51 aa15.8■□□□□ 0.12
SYNE2-201ENST00000341472 CD200R1LQ6Q8B3 271 aa15.8■□□□□ 0.12
SYNE2-201ENST00000341472 OR13F1Q8NGS4 319 aa15.8■□□□□ 0.12
SYNE2-201ENST00000341472 ABHD14BQ96IU4 210 aa15.8■□□□□ 0.12
SYNE2-201ENST00000341472 OR51J1Q9H342 316 aa15.8■□□□□ 0.12
SYNE2-201ENST00000341472 OR1A1Q9P1Q5 309 aa15.8■□□□□ 0.12
SYNE2-201ENST00000341472 KIAA1456Q9P272 454 aa15.8■□□□□ 0.12
SYNE2-201ENST00000341472 RNF150Q9ULK6 438 aa15.8■□□□□ 0.12
SYNE2-201ENST00000341472 WSB1Q9Y6I7 421 aa15.8■□□□□ 0.12
SYNE2-201ENST00000341472 IFITM5A6NNB3 132 aa15.79■□□□□ 0.12
SYNE2-201ENST00000341472 HLA-DRB1P01911 266 aa15.79■□□□□ 0.12
SYNE2-201ENST00000341472 CD36P16671 472 aa15.79■□□□□ 0.12
SYNE2-201ENST00000341472 GALP22466 123 aa15.79■□□□□ 0.12
SYNE2-201ENST00000341472 OR10A3P58181 314 aa15.79■□□□□ 0.12
SYNE2-201ENST00000341472 MRPS15P82914 257 aaKnown RBP15.79■□□□□ 0.12
SYNE2-201ENST00000341472 PLA2G7Q13093 441 aa15.79■□□□□ 0.12
SYNE2-201ENST00000341472 TIMM50Q3ZCQ8 353 aa15.79■□□□□ 0.12
SYNE2-201ENST00000341472 FAM131AQ6UXB0 335 aa15.79■□□□□ 0.12
SYNE2-201ENST00000341472 DPF1Q92782 380 aa15.79■□□□□ 0.12
SYNE2-201ENST00000341472 PTX4Q96A99 478 aa15.79■□□□□ 0.12
SYNE2-201ENST00000341472 RAB3CQ96E17 227 aa15.79■□□□□ 0.12
SYNE2-201ENST00000341472 RAX2Q96IS3 184 aa15.79■□□□□ 0.12
SYNE2-201ENST00000341472 DUX3Q96PT4 197 aa15.79■□□□□ 0.12
SYNE2-201ENST00000341472 AGMATQ9BSE5 352 aa15.79■□□□□ 0.12
SYNE2-201ENST00000341472 DNAH3Q8TD57 4116 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms