RNA–Protein interactions for RNA: ENST00000341307.6

RTN3-203, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-203ENST00000341307 HHLA2Q9UM44 414 aa10.13□□□□□ -0.79
RTN3-203ENST00000341307 TMED7-TICAM2A0A0A6YYA0 188 aa10.13□□□□□ -0.79
RTN3-203ENST00000341307 LOC101059948A0A1B0GTJ6 334 aa10.13□□□□□ -0.79
RTN3-203ENST00000341307 BGLAPP02818 100 aa10.13□□□□□ -0.79
RTN3-203ENST00000341307 HPNP05981 417 aa10.13□□□□□ -0.79
RTN3-203ENST00000341307 GNRHRP30968 328 aa10.13□□□□□ -0.79
RTN3-203ENST00000341307 STXBP6Q8NFX7 210 aa10.13□□□□□ -0.79
RTN3-203ENST00000341307 ARHGAP5-AS1Q96IT6 56 aa10.13□□□□□ -0.79
RTN3-203ENST00000341307 C18orf12Q96KH6 178 aa10.13□□□□□ -0.79
RTN3-203ENST00000341307 ATP5SQ99766 215 aa10.13□□□□□ -0.79
RTN3-203ENST00000341307 OR7C2O60412 319 aa10.12□□□□□ -0.79
RTN3-203ENST00000341307 CER1O95813 267 aa10.12□□□□□ -0.79
RTN3-203ENST00000341307 POU3F1Q03052 451 aaPredicted RBP10.12□□□□□ -0.79
RTN3-203ENST00000341307 GNMTQ14749 295 aa10.12□□□□□ -0.79
RTN3-203ENST00000341307 RSPO4Q2I0M5 234 aaPredicted RBP10.12□□□□□ -0.79
RTN3-203ENST00000341307 FAM71F2Q6NXP2 309 aa10.12□□□□□ -0.79
RTN3-203ENST00000341307 MUC15Q8N387 334 aa10.12□□□□□ -0.79
RTN3-203ENST00000341307 DEFB124Q8NES8 71 aa10.12□□□□□ -0.79
RTN3-203ENST00000341307 ZNF48Q96MX3 618 aaPredicted RBP10.12□□□□□ -0.79
RTN3-203ENST00000341307 VSIRQ9H7M9 311 aa10.12□□□□□ -0.79
RTN3-203ENST00000341307 ZNF586Q9NXT0 402 aa10.12□□□□□ -0.79
RTN3-203ENST00000341307 FBLN5Q9UBX5 448 aa10.12□□□□□ -0.79
RTN3-203ENST00000341307 IGKV1D-8A0A087WSZ0 117 aa10.12□□□□□ -0.79
RTN3-203ENST00000341307 GJE1A6NN92 205 aa10.12□□□□□ -0.79
RTN3-203ENST00000341307 FAM166BA8MTA8 275 aa10.12□□□□□ -0.79
RTN3-203ENST00000341307 RBFOX2O43251 390 aaKnown RBP eCLIP10.12□□□□□ -0.79
RTN3-203ENST00000341307 SRSF10O75494 262 aaKnown RBP10.12□□□□□ -0.79
RTN3-203ENST00000341307 MC5RP33032 325 aa10.12□□□□□ -0.79
RTN3-203ENST00000341307 GABRA2P47869 451 aa10.12□□□□□ -0.79
RTN3-203ENST00000341307 GFRA1P56159 465 aa10.12□□□□□ -0.79
RTN3-203ENST00000341307 TAS2R46P59540 309 aa10.12□□□□□ -0.79
RTN3-203ENST00000341307 RAET1LQ5VY80 246 aa10.12□□□□□ -0.79
RTN3-203ENST00000341307 MRPL14Q6P1L8 145 aaKnown RBP10.12□□□□□ -0.79
RTN3-203ENST00000341307 KCNIP4Q6PIL6 250 aa10.12□□□□□ -0.79
RTN3-203ENST00000341307 PNKDQ8N490 385 aa10.12□□□□□ -0.79
RTN3-203ENST00000341307 TMEM252Q8N6L7 170 aa10.12□□□□□ -0.79
RTN3-203ENST00000341307 OR10G3Q8NGC4 313 aa10.12□□□□□ -0.79
RTN3-203ENST00000341307 OR1N2Q8NGR9 330 aa10.12□□□□□ -0.79
RTN3-203ENST00000341307 FAM103A1Q9BTL3 118 aaKnown RBP10.12□□□□□ -0.79
RTN3-203ENST00000341307 RPRMQ9NS64 109 aa10.12□□□□□ -0.79
RTN3-203ENST00000341307 NCOR2Q9Y618 2525 aa10.12□□□□□ -0.79
RTN3-203ENST00000341307 TRAV36DV7A0A075B6V5 113 aa10.11□□□□□ -0.79
RTN3-203ENST00000341307 A0A1W2PP11 408 aa10.11□□□□□ -0.79
RTN3-203ENST00000341307 NTN3O00634 580 aaPredicted RBP10.11□□□□□ -0.79
RTN3-203ENST00000341307 HS3ST1O14792 307 aa10.11□□□□□ -0.79
RTN3-203ENST00000341307 CST7O76096 145 aa10.11□□□□□ -0.79
RTN3-203ENST00000341307 ANOS1P23352 680 aa10.11□□□□□ -0.79
RTN3-203ENST00000341307 NKX2-1P43699 371 aaPredicted RBP10.11□□□□□ -0.79
RTN3-203ENST00000341307 MLF1P58340 268 aa10.11□□□□□ -0.79
RTN3-203ENST00000341307 ARFRP1Q13795 201 aa10.11□□□□□ -0.79
RTN3-203ENST00000341307 KRTCAP3Q53RY4 240 aa10.11□□□□□ -0.79
RTN3-203ENST00000341307 TSPO2Q5TGU0 170 aa10.11□□□□□ -0.79
RTN3-203ENST00000341307 SLC22A24Q8N4F4 322 aa10.11□□□□□ -0.79
RTN3-203ENST00000341307 OR11L1Q8NGX0 322 aa10.11□□□□□ -0.79
RTN3-203ENST00000341307 RSG1Q9BU20 258 aa10.11□□□□□ -0.79
RTN3-203ENST00000341307 SAMD10Q9BYL1 202 aa10.11□□□□□ -0.79
RTN3-203ENST00000341307 G6PC2Q9NQR9 355 aa10.11□□□□□ -0.79
RTN3-203ENST00000341307 KLRF1Q9NZS2 232 aa10.11□□□□□ -0.79
RTN3-203ENST00000341307 A0A1B0GV72 72 aa10.11□□□□□ -0.79
RTN3-203ENST00000341307 SPAARA0A1B0GVQ0 90 aa10.11□□□□□ -0.79
RTN3-203ENST00000341307 RAMP3O60896 148 aa10.11□□□□□ -0.79
RTN3-203ENST00000341307 TOX4O94842 621 aa10.11□□□□□ -0.79
RTN3-203ENST00000341307 MPIG6BO95866 241 aa10.11□□□□□ -0.79
RTN3-203ENST00000341307 STAG3L3P0CL85 134 aa10.11□□□□□ -0.79
RTN3-203ENST00000341307 GLI4P10075 376 aa10.11□□□□□ -0.79
RTN3-203ENST00000341307 HLA-DOBP13765 273 aa10.11□□□□□ -0.79
RTN3-203ENST00000341307 PIGPP57054 158 aa10.11□□□□□ -0.79
RTN3-203ENST00000341307 MRPS34P82930 218 aaKnown RBP10.11□□□□□ -0.79
RTN3-203ENST00000341307 ROM1Q03395 351 aa10.11□□□□□ -0.79
RTN3-203ENST00000341307 TLE1Q04724 770 aa10.11□□□□□ -0.79
RTN3-203ENST00000341307 EXT1Q16394 746 aa10.11□□□□□ -0.79
RTN3-203ENST00000341307 BHLHA15Q7RTS1 189 aaPredicted RBP10.11□□□□□ -0.79
RTN3-203ENST00000341307 MRGPRGQ86SM5 289 aa10.11□□□□□ -0.79
RTN3-203ENST00000341307 KLHDC1Q8N7A1 406 aa10.11□□□□□ -0.79
RTN3-203ENST00000341307 LRTM2Q8N967 370 aa10.11□□□□□ -0.79
RTN3-203ENST00000341307 MBD3L1Q8WWY6 194 aa10.11□□□□□ -0.79
RTN3-203ENST00000341307 C11orf40Q8WZ69 217 aa10.11□□□□□ -0.79
RTN3-203ENST00000341307 C1orf147Q96MC9 270 aaPredicted RBP10.11□□□□□ -0.79
RTN3-203ENST00000341307 WNT10AQ9GZT5 417 aa10.11□□□□□ -0.79
RTN3-203ENST00000341307 BANF2Q9H503 90 aa10.11□□□□□ -0.79
RTN3-203ENST00000341307 ZZEF1O43149 2961 aa10.11□□□□□ -0.79
RTN3-203ENST00000341307 LOC400499M0QZD8 3231 aa10.11□□□□□ -0.79
RTN3-203ENST00000341307 CEP295Q9C0D2 2601 aa10.11□□□□□ -0.79
RTN3-203ENST00000341307 EXPH5Q8NEV8 1989 aa10.11□□□□□ -0.79
RTN3-203ENST00000341307 DUXBA0A1W2PPF3 345 aa10.1□□□□□ -0.79
RTN3-203ENST00000341307 H3BML4 177 aa10.1□□□□□ -0.79
RTN3-203ENST00000341307 GPX1P07203 203 aa10.1□□□□□ -0.79
RTN3-203ENST00000341307 CLDN15P56746 228 aa10.1□□□□□ -0.79
RTN3-203ENST00000341307 YPEL3P61236 119 aaPredicted RBP10.1□□□□□ -0.79
RTN3-203ENST00000341307 FER1L6-AS1Q8NA97 138 aa10.1□□□□□ -0.79
RTN3-203ENST00000341307 ST6GALNAC3Q8NDV1 305 aa10.1□□□□□ -0.79
RTN3-203ENST00000341307 OR2M3Q8NG83 312 aa10.1□□□□□ -0.79
RTN3-203ENST00000341307 OR5B3Q8NH48 314 aa10.1□□□□□ -0.79
RTN3-203ENST00000341307 KCNG3Q8TAE7 436 aa10.1□□□□□ -0.79
RTN3-203ENST00000341307 LIME1Q9H400 295 aa10.1□□□□□ -0.79
RTN3-203ENST00000341307 PLEKHF2Q9H8W4 249 aa10.1□□□□□ -0.79
RTN3-203ENST00000341307 EMC9Q9Y3B6 208 aa10.1□□□□□ -0.79
RTN3-203ENST00000341307 PHF3Q92576 2039 aaKnown RBP10.1□□□□□ -0.79
RTN3-203ENST00000341307 CPAMD8Q8IZJ3 1885 aa10.1□□□□□ -0.79
RTN3-203ENST00000341307 TM4SF5O14894 197 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms