RNA–Protein interactions for RNA: ENST00000340541.4

VAPA-201, Transcript of VAMP associated protein A, humanhuman

TSL 5 BASIC

Gene VAPA, Length 1,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-201ENST00000340541 CEACAM6P40199 344 aa12.2□□□□□ -0.46
VAPA-201ENST00000340541 SCAND1P57086 179 aa12.2□□□□□ -0.46
VAPA-201ENST00000340541 ARSJQ5FYB0 599 aaPredicted RBP12.2□□□□□ -0.46
VAPA-201ENST00000340541 IDNKQ5T6J7 187 aa12.2□□□□□ -0.46
VAPA-201ENST00000340541 REC114Q7Z4M0 266 aa12.2□□□□□ -0.46
VAPA-201ENST00000340541 NABP2Q9BQ15 211 aa12.2□□□□□ -0.46
VAPA-201ENST00000340541 MRPL20Q9BYC9 149 aaKnown RBP12.2□□□□□ -0.46
VAPA-201ENST00000340541 TOLLIPQ9H0E2 274 aa12.2□□□□□ -0.46
VAPA-201ENST00000340541 C11orf54Q9H0W9 315 aaPredicted RBP12.2□□□□□ -0.46
VAPA-201ENST00000340541 RHBDL2Q9NX52 303 aa12.2□□□□□ -0.46
VAPA-201ENST00000340541 ZNF230Q9UIE0 474 aaPredicted RBP12.2□□□□□ -0.46
VAPA-201ENST00000340541 PRKDCP78527 4128 aaKnown RBP12.19□□□□□ -0.46
VAPA-201ENST00000340541 IGKV1D-8A0A087WSZ0 117 aa12.19□□□□□ -0.46
VAPA-201ENST00000340541 FABP7O15540 132 aa12.19□□□□□ -0.46
VAPA-201ENST00000340541 PROP1O75360 226 aa12.19□□□□□ -0.46
VAPA-201ENST00000340541 MOSP00540 346 aa12.19□□□□□ -0.46
VAPA-201ENST00000340541 GSTT2P0CG29 244 aa12.19□□□□□ -0.46
VAPA-201ENST00000340541 GSTT2BP0CG30 244 aa12.19□□□□□ -0.46
VAPA-201ENST00000340541 RPS19P39019 145 aaKnown RBP12.19□□□□□ -0.46
VAPA-201ENST00000340541 LSM3P62310 102 aaKnown RBP12.19□□□□□ -0.46
VAPA-201ENST00000340541 BEAN1Q3B7T3 259 aa12.19□□□□□ -0.46
VAPA-201ENST00000340541 CDNFQ49AH0 187 aa12.19□□□□□ -0.46
VAPA-201ENST00000340541 IGSF11Q5DX21 431 aa12.19□□□□□ -0.46
VAPA-201ENST00000340541 FAM71F2Q6NXP2 309 aa12.19□□□□□ -0.46
VAPA-201ENST00000340541 Q6ZS49 121 aa12.19□□□□□ -0.46
VAPA-201ENST00000340541 C1QL4Q86Z23 238 aa12.19□□□□□ -0.46
VAPA-201ENST00000340541 Q8N9W7 124 aa12.19□□□□□ -0.46
VAPA-201ENST00000340541 OR4A4PQ8NGN8 299 aa12.19□□□□□ -0.46
VAPA-201ENST00000340541 OR13F1Q8NGS4 319 aa12.19□□□□□ -0.46
VAPA-201ENST00000340541 MAFIPQ8WZ33 124 aa12.19□□□□□ -0.46
VAPA-201ENST00000340541 ABHD14BQ96IU4 210 aa12.19□□□□□ -0.46
VAPA-201ENST00000340541 CABLES2Q9BTV7 478 aa12.19□□□□□ -0.46
VAPA-201ENST00000340541 FUNDC2Q9BWH2 189 aa12.19□□□□□ -0.46
VAPA-201ENST00000340541 ETV7Q9Y603 341 aa12.19□□□□□ -0.46
VAPA-201ENST00000340541 ADARB2-AS1A8MUL3 147 aa12.18□□□□□ -0.46
VAPA-201ENST00000340541 FBXO24O75426 580 aa12.18□□□□□ -0.46
VAPA-201ENST00000340541 MRPS15P82914 257 aaKnown RBP12.18□□□□□ -0.46
VAPA-201ENST00000340541 ARFRP1Q13795 201 aa12.18□□□□□ -0.46
VAPA-201ENST00000340541 KIR2DS1Q14954 304 aa12.18□□□□□ -0.46
VAPA-201ENST00000340541 ARL6IP1Q15041 203 aa12.18□□□□□ -0.46
VAPA-201ENST00000340541 SRSF7Q16629 238 aaKnown RBP eCLIP12.18□□□□□ -0.46
VAPA-201ENST00000340541 ZNF260Q3ZCT1 412 aa12.18□□□□□ -0.46
VAPA-201ENST00000340541 RPL39P5Q59GN2 51 aa12.18□□□□□ -0.46
VAPA-201ENST00000340541 TCTEX1D4Q5JR98 221 aa12.18□□□□□ -0.46
VAPA-201ENST00000340541 SAMD5Q5TGI4 173 aa12.18□□□□□ -0.46
VAPA-201ENST00000340541 HACD4Q5VWC8 232 aa12.18□□□□□ -0.46
VAPA-201ENST00000340541 EDARADDQ8WWZ3 215 aa12.18□□□□□ -0.46
VAPA-201ENST00000340541 RITA1Q96K30 269 aa12.18□□□□□ -0.46
VAPA-201ENST00000340541 RDH8Q9NYR8 311 aa12.18□□□□□ -0.46
VAPA-201ENST00000340541 PIPOXQ9P0Z9 390 aa12.18□□□□□ -0.46
VAPA-201ENST00000340541 TRBV6-7A0A0A0MS04 114 aa12.17□□□□□ -0.46
VAPA-201ENST00000340541 TMEM235A6NFC5 223 aa12.17□□□□□ -0.46
VAPA-201ENST00000340541 RAB29O14966 203 aa12.17□□□□□ -0.46
VAPA-201ENST00000340541 HSPA12AO43301 675 aa12.17□□□□□ -0.46
VAPA-201ENST00000340541 SSX5O60225 188 aa12.17□□□□□ -0.46
VAPA-201ENST00000340541 TMEM127O75204 238 aa12.17□□□□□ -0.46
VAPA-201ENST00000340541 PEX14O75381 377 aa12.17□□□□□ -0.46
VAPA-201ENST00000340541 SCGNO76038 276 aa12.17□□□□□ -0.46
VAPA-201ENST00000340541 DIRAS3O95661 229 aa12.17□□□□□ -0.46
VAPA-201ENST00000340541 IGHG2P01859 326 aa12.17□□□□□ -0.46
VAPA-201ENST00000340541 GSTP1P09211 210 aaKnown RBP12.17□□□□□ -0.46
VAPA-201ENST00000340541 CT45A6P0DMU7 189 aa12.17□□□□□ -0.46
VAPA-201ENST00000340541 CT45A5P0DMU8 189 aa12.17□□□□□ -0.46
VAPA-201ENST00000340541 CT45A7P0DMV0 189 aa12.17□□□□□ -0.46
VAPA-201ENST00000340541 DTYMKP23919 212 aa12.17□□□□□ -0.46
VAPA-201ENST00000340541 SERPINB10P48595 397 aa12.17□□□□□ -0.46
VAPA-201ENST00000340541 F2RL1P55085 397 aa12.17□□□□□ -0.46
VAPA-201ENST00000340541 C9orf152Q5JTZ5 239 aa12.17□□□□□ -0.46
VAPA-201ENST00000340541 C10orf99Q6UWK7 81 aa12.17□□□□□ -0.46
VAPA-201ENST00000340541 FAM71E2Q8N5Q1 922 aa12.17□□□□□ -0.46
VAPA-201ENST00000340541 OR5AU1Q8NGC0 362 aa12.17□□□□□ -0.46
VAPA-201ENST00000340541 OR8H1Q8NGG4 311 aa12.17□□□□□ -0.46
VAPA-201ENST00000340541 S1PR3Q99500 378 aa12.17□□□□□ -0.46
VAPA-201ENST00000340541 CITED2Q99967 270 aaPredicted RBP12.17□□□□□ -0.46
VAPA-201ENST00000340541 LIN7CQ9NUP9 197 aaKnown RBP12.17□□□□□ -0.46
VAPA-201ENST00000340541 SPATA2Q9UM82 520 aa12.17□□□□□ -0.46
VAPA-201ENST00000340541 PLXNB1O43157 2135 aa12.16□□□□□ -0.46
VAPA-201ENST00000340541 LINC01548A6NM66 108 aa12.16□□□□□ -0.46
VAPA-201ENST00000340541 NCBP2LA6PVI3 153 aaKnown RBP12.16□□□□□ -0.46
VAPA-201ENST00000340541 G3V4G9 280 aa12.16□□□□□ -0.46
VAPA-201ENST00000340541 TALDO1P37837 337 aa12.16□□□□□ -0.46
VAPA-201ENST00000340541 NCS1P62166 190 aa12.16□□□□□ -0.46
VAPA-201ENST00000340541 CD83Q01151 205 aa12.16□□□□□ -0.46
VAPA-201ENST00000340541 CROCCP3Q8IVE0 287 aa12.16□□□□□ -0.46
VAPA-201ENST00000340541 NUDCD2Q8WVJ2 157 aa12.16□□□□□ -0.46
VAPA-201ENST00000340541 ABCG5Q9H222 651 aa12.16□□□□□ -0.46
VAPA-201ENST00000340541 GHITMQ9H3K2 345 aa12.16□□□□□ -0.46
VAPA-201ENST00000340541 RNF150Q9ULK6 438 aa12.16□□□□□ -0.46
VAPA-201ENST00000340541 BET1O15155 118 aa12.15□□□□□ -0.46
VAPA-201ENST00000340541 ACTBP60709 375 aa12.15□□□□□ -0.46
VAPA-201ENST00000340541 PNLIPRP3Q17RR3 467 aa12.15□□□□□ -0.46
VAPA-201ENST00000340541 CENPVQ7Z7K6 275 aaPredicted RBP12.15□□□□□ -0.46
VAPA-201ENST00000340541 NOL4LQ96MY1 436 aaPredicted RBP12.15□□□□□ -0.46
VAPA-201ENST00000340541 A0A0A6YYH2 397 aa12.14□□□□□ -0.47
VAPA-201ENST00000340541 A6NJ64 397 aa12.14□□□□□ -0.47
VAPA-201ENST00000340541 H0YJW9 148 aa12.14□□□□□ -0.47
VAPA-201ENST00000340541 CNTFRP26992 372 aa12.14□□□□□ -0.47
VAPA-201ENST00000340541 GPR12P47775 334 aa12.14□□□□□ -0.47
VAPA-201ENST00000340541 VBP1P61758 197 aa12.14□□□□□ -0.47
VAPA-201ENST00000340541 FAM131AQ6UXB0 335 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms