RNA–Protein interactions for RNA: ENST00000340437.8

CPSF7-201, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 1 (best) BASIC

Gene CPSF7, Length 3,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-201ENST00000340437 OR1C1Q15619 314 aa12.21□□□□□ -0.46
CPSF7-201ENST00000340437 UNQ6494/PRO21346Q6UXR6 183 aa12.21□□□□□ -0.46
CPSF7-201ENST00000340437 SLC35E3Q7Z769 313 aa12.21□□□□□ -0.46
CPSF7-201ENST00000340437 ZNF525Q8N782 197 aa12.21□□□□□ -0.46
CPSF7-201ENST00000340437 SPSB4Q96A44 273 aa12.21□□□□□ -0.46
CPSF7-201ENST00000340437 A0A1B0GU03 582 aa12.2□□□□□ -0.46
CPSF7-201ENST00000340437 OR2H2O95918 312 aa12.2□□□□□ -0.46
CPSF7-201ENST00000340437 OR3A1P47881 315 aa12.2□□□□□ -0.46
CPSF7-201ENST00000340437 GFRA1P56159 465 aa12.2□□□□□ -0.46
CPSF7-201ENST00000340437 NCR3LG1Q68D85 454 aa12.2□□□□□ -0.46
CPSF7-201ENST00000340437 C16orf82Q7Z2V1 217 aa12.2□□□□□ -0.46
CPSF7-201ENST00000340437 HAPLN4Q86UW8 402 aa12.2□□□□□ -0.46
CPSF7-201ENST00000340437 ZNF295-AS1Q8N0V1 137 aa12.2□□□□□ -0.46
CPSF7-201ENST00000340437 FGFRL1Q8N441 504 aa12.2□□□□□ -0.46
CPSF7-201ENST00000340437 OR5P3Q8WZ94 311 aa12.2□□□□□ -0.46
CPSF7-201ENST00000340437 TMEM204Q9BSN7 226 aa12.2□□□□□ -0.46
CPSF7-201ENST00000340437 ELOVL1Q9BW60 279 aa12.2□□□□□ -0.46
CPSF7-201ENST00000340437 OR2J1Q9GZK6 312 aa12.2□□□□□ -0.46
CPSF7-201ENST00000340437 B4GALT7Q9UBV7 327 aa12.2□□□□□ -0.46
CPSF7-201ENST00000340437 MDP1Q86V88 176 aa12.2□□□□□ -0.46
CPSF7-201ENST00000340437 H1FOOQ8IZA3 346 aaPredicted RBP12.2□□□□□ -0.46
CPSF7-201ENST00000340437 YPEL4Q96NS1 127 aa12.2□□□□□ -0.46
CPSF7-201ENST00000340437 OR2D2Q9H210 308 aa12.2□□□□□ -0.46
CPSF7-201ENST00000340437 DMRT1Q9Y5R6 373 aa12.2□□□□□ -0.46
CPSF7-201ENST00000340437 CRYAAP02489 173 aa12.19□□□□□ -0.46
CPSF7-201ENST00000340437 IL2RGP31785 369 aa12.19□□□□□ -0.46
CPSF7-201ENST00000340437 CHRNA7P36544 502 aa12.19□□□□□ -0.46
CPSF7-201ENST00000340437 HIST3H2BBQ8N257 126 aa12.19□□□□□ -0.46
CPSF7-201ENST00000340437 OR52L2PQ8NGH6 319 aa12.19□□□□□ -0.46
CPSF7-201ENST00000340437 OR1L1Q8NH94 360 aa12.19□□□□□ -0.46
CPSF7-201ENST00000340437 ZDHHC16Q969W1 377 aa12.19□□□□□ -0.46
CPSF7-201ENST00000340437 SMDT1Q9H4I9 107 aa12.19□□□□□ -0.46
CPSF7-201ENST00000340437 OBP2BQ9NPH6 170 aa12.19□□□□□ -0.46
CPSF7-201ENST00000340437 WASF3Q9UPY6 502 aa12.19□□□□□ -0.46
CPSF7-201ENST00000340437 WNT9BO14905 357 aa12.19□□□□□ -0.46
CPSF7-201ENST00000340437 GALR2O43603 387 aaPredicted RBP12.19□□□□□ -0.46
CPSF7-201ENST00000340437 RNF224P0DH78 156 aa12.19□□□□□ -0.46
CPSF7-201ENST00000340437 C1QL4Q86Z23 238 aa12.19□□□□□ -0.46
CPSF7-201ENST00000340437 LOC400499M0QZD8 3231 aa12.19□□□□□ -0.46
CPSF7-201ENST00000340437 A0A1B0GV90 55 aa12.19□□□□□ -0.46
CPSF7-201ENST00000340437 A0A1B0GW64 132 aa12.19□□□□□ -0.46
CPSF7-201ENST00000340437 SERPINA7P05543 415 aa12.19□□□□□ -0.46
CPSF7-201ENST00000340437 AESQ08117 197 aa12.19□□□□□ -0.46
CPSF7-201ENST00000340437 CST9LP1Q5W188 147 aa12.19□□□□□ -0.46
CPSF7-201ENST00000340437 ZNF66Q6ZN08 573 aa12.19□□□□□ -0.46
CPSF7-201ENST00000340437 LRP11Q86VZ4 500 aa12.19□□□□□ -0.46
CPSF7-201ENST00000340437 DRAM1Q8N682 238 aa12.19□□□□□ -0.46
CPSF7-201ENST00000340437 POM121L2Q96KW2 1035 aa12.19□□□□□ -0.46
CPSF7-201ENST00000340437 LHX2P50458 406 aa12.18□□□□□ -0.46
CPSF7-201ENST00000340437 ZFP36L1Q07352 338 aaKnown RBP12.18□□□□□ -0.46
CPSF7-201ENST00000340437 OR5B12Q96R08 314 aa12.18□□□□□ -0.46
CPSF7-201ENST00000340437 PCGF1Q9BSM1 259 aa12.18□□□□□ -0.46
CPSF7-201ENST00000340437 TTTY12Q9BZ98 90 aa12.18□□□□□ -0.46
CPSF7-201ENST00000340437 SIRT7Q9NRC8 400 aa12.18□□□□□ -0.46
CPSF7-201ENST00000340437 LYZL6O75951 148 aa12.18□□□□□ -0.46
CPSF7-201ENST00000340437 IFNA1P01562 189 aa12.18□□□□□ -0.46
CPSF7-201ENST00000340437 IGKV1D-33P01593 117 aa12.18□□□□□ -0.46
CPSF7-201ENST00000340437 IGKV1-33P01594 117 aa12.18□□□□□ -0.46
CPSF7-201ENST00000340437 FGF7P21781 194 aa12.18□□□□□ -0.46
CPSF7-201ENST00000340437 GABRA2P47869 451 aa12.18□□□□□ -0.46
CPSF7-201ENST00000340437 COLCA1Q6ZS62 124 aa12.18□□□□□ -0.46
CPSF7-201ENST00000340437 TMEM251Q8N6I4 163 aa12.18□□□□□ -0.46
CPSF7-201ENST00000340437 SDF2L1Q9HCN8 221 aa12.18□□□□□ -0.46
CPSF7-201ENST00000340437 TMEM9BQ9NQ34 198 aa12.18□□□□□ -0.46
CPSF7-201ENST00000340437 MGAQ8IWI9 3026 aa12.18□□□□□ -0.46
CPSF7-201ENST00000340437 ATRXP46100 2492 aa12.18□□□□□ -0.46
CPSF7-201ENST00000340437 SPG11Q96JI7 2443 aa12.18□□□□□ -0.46
CPSF7-201ENST00000340437 H7BYZ3 331 aa12.18□□□□□ -0.46
CPSF7-201ENST00000340437 CYB5R3P00387 301 aaPredicted RBP12.18□□□□□ -0.46
CPSF7-201ENST00000340437 GPX4P36969 197 aaPredicted RBP12.18□□□□□ -0.46
CPSF7-201ENST00000340437 ARG2P78540 354 aa12.18□□□□□ -0.46
CPSF7-201ENST00000340437 KRTAP27-1Q3LI81 207 aa12.18□□□□□ -0.46
CPSF7-201ENST00000340437 RPP25LQ8N5L8 163 aaKnown RBP12.18□□□□□ -0.46
CPSF7-201ENST00000340437 MRGPRDQ8TDS7 321 aa12.18□□□□□ -0.46
CPSF7-201ENST00000340437 CA5BP1Q8WTZ4 195 aa12.18□□□□□ -0.46
CPSF7-201ENST00000340437 TAF15Q92804 592 aaKnown RBP eCLIP12.18□□□□□ -0.46
CPSF7-201ENST00000340437 VAX2Q9UIW0 290 aa12.18□□□□□ -0.46
CPSF7-201ENST00000340437 A0A087WWC5 75 aa12.17□□□□□ -0.46
CPSF7-201ENST00000340437 CLDN18P56856 261 aa12.17□□□□□ -0.46
CPSF7-201ENST00000340437 FAM3BP58499 235 aaPredicted RBP12.17□□□□□ -0.46
CPSF7-201ENST00000340437 TMEM241Q24JQ0 296 aa12.17□□□□□ -0.46
CPSF7-201ENST00000340437 ZNF585BQ52M93 769 aa12.17□□□□□ -0.46
CPSF7-201ENST00000340437 FFAR4Q5NUL3 377 aa12.17□□□□□ -0.46
CPSF7-201ENST00000340437 SCCPDHQ8NBX0 429 aa12.17□□□□□ -0.46
CPSF7-201ENST00000340437 FAM173AQ9BQD7 235 aa12.17□□□□□ -0.46
CPSF7-201ENST00000340437 TREM2Q9NZC2 230 aa12.17□□□□□ -0.46
CPSF7-201ENST00000340437 PLCE1Q9P212 2302 aa12.17□□□□□ -0.46
CPSF7-201ENST00000340437 ZNF729A6NN14 1252 aaPredicted RBP12.17□□□□□ -0.46
CPSF7-201ENST00000340437 PAGE4O60829 102 aa12.17□□□□□ -0.46
CPSF7-201ENST00000340437 NEURL1O76050 574 aa12.17□□□□□ -0.46
CPSF7-201ENST00000340437 ARR3P36575 388 aa12.17□□□□□ -0.46
CPSF7-201ENST00000340437 EDDM3AQ14507 147 aa12.17□□□□□ -0.46
CPSF7-201ENST00000340437 SSPNQ14714 243 aa12.17□□□□□ -0.46
CPSF7-201ENST00000340437 ZNF709Q8N972 641 aa12.17□□□□□ -0.46
CPSF7-201ENST00000340437 POM121Q96HA1 1249 aa12.17□□□□□ -0.46
CPSF7-201ENST00000340437 ABHD14BQ96IU4 210 aa12.17□□□□□ -0.46
CPSF7-201ENST00000340437 RIMS4Q9H426 269 aaPredicted RBP12.17□□□□□ -0.46
CPSF7-201ENST00000340437 CISD1Q9NZ45 108 aaKnown RBP12.17□□□□□ -0.46
CPSF7-201ENST00000340437 NTN3O00634 580 aaPredicted RBP12.17□□□□□ -0.46
CPSF7-201ENST00000340437 ZG16O60844 167 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms