RNA–Protein interactions for RNA: ENST00000338850.5

RTN3-201, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-201ENST00000338850 OR10J5Q8NHC4 309 aa9.11□□□□□ -0.95
RTN3-201ENST00000338850 FAM57AQ8TBR7 257 aa9.11□□□□□ -0.95
RTN3-201ENST00000338850 BCL2L2Q92843 193 aaPredicted RBP9.11□□□□□ -0.95
RTN3-201ENST00000338850 PINX1Q96BK5 328 aaKnown RBP9.11□□□□□ -0.95
RTN3-201ENST00000338850 MUCL1Q96DR8 90 aa9.11□□□□□ -0.95
RTN3-201ENST00000338850 LURAP1Q96LR2 239 aa9.11□□□□□ -0.95
RTN3-201ENST00000338850 ZNF251Q9BRH9 671 aa9.11□□□□□ -0.95
RTN3-201ENST00000338850 RTL8AQ9BWD3 113 aa9.11□□□□□ -0.95
RTN3-201ENST00000338850 CCL28Q9NRJ3 127 aa9.11□□□□□ -0.95
RTN3-201ENST00000338850 CSMD1Q96PZ7 3565 aa9.11□□□□□ -0.95
RTN3-201ENST00000338850 TACC2O95359 2948 aa9.11□□□□□ -0.95
RTN3-201ENST00000338850 DCHS2Q6V1P9 2916 aa9.1□□□□□ -0.95
RTN3-201ENST00000338850 LOC102723971A0A1B0GUV8 181 aa9.1□□□□□ -0.95
RTN3-201ENST00000338850 M0R036 132 aa9.1□□□□□ -0.95
RTN3-201ENST00000338850 IFNA5P01569 189 aa9.1□□□□□ -0.95
RTN3-201ENST00000338850 HLA-HP01893 362 aa9.1□□□□□ -0.95
RTN3-201ENST00000338850 S100A9P06702 114 aaKnown RBP9.1□□□□□ -0.95
RTN3-201ENST00000338850 S100A6P06703 90 aa9.1□□□□□ -0.95
RTN3-201ENST00000338850 SNRNP70P08621 437 aaKnown RBP9.1□□□□□ -0.95
RTN3-201ENST00000338850 RPL35P42766 123 aaKnown RBP9.1□□□□□ -0.95
RTN3-201ENST00000338850 AKR1D1P51857 326 aa9.1□□□□□ -0.95
RTN3-201ENST00000338850 RPS23P62266 143 aaKnown RBP9.1□□□□□ -0.95
RTN3-201ENST00000338850 BRICD5Q6PL45 260 aa9.1□□□□□ -0.95
RTN3-201ENST00000338850 HEPN1Q6WQI6 88 aa9.1□□□□□ -0.95
RTN3-201ENST00000338850 ZNF497Q6ZNH5 498 aa9.1□□□□□ -0.95
RTN3-201ENST00000338850 CENPVQ7Z7K6 275 aaPredicted RBP9.1□□□□□ -0.95
RTN3-201ENST00000338850 CLDND2Q8NHS1 167 aa9.1□□□□□ -0.95
RTN3-201ENST00000338850 PRRG4Q9BZD6 226 aa9.1□□□□□ -0.95
RTN3-201ENST00000338850 CISD1Q9NZ45 108 aaKnown RBP9.1□□□□□ -0.95
RTN3-201ENST00000338850 FREM1Q5H8C1 2179 aa9.1□□□□□ -0.95
RTN3-201ENST00000338850 GTF3C1Q12789 2109 aa9.1□□□□□ -0.95
RTN3-201ENST00000338850 AP4M1O00189 453 aa9.09□□□□□ -0.95
RTN3-201ENST00000338850 SYNGR1O43759 233 aa9.09□□□□□ -0.95
RTN3-201ENST00000338850 CHST1O43916 411 aa9.09□□□□□ -0.95
RTN3-201ENST00000338850 EIF3GO75821 320 aaKnown RBP eCLIP9.09□□□□□ -0.951e-11■■■□□ 15.7
RTN3-201ENST00000338850 TMEM50AO95807 157 aa9.09□□□□□ -0.95
RTN3-201ENST00000338850 SERPINE2P07093 398 aa9.09□□□□□ -0.95
RTN3-201ENST00000338850 WNT5AP41221 380 aa9.09□□□□□ -0.95
RTN3-201ENST00000338850 FHITP49789 147 aa9.09□□□□□ -0.95
RTN3-201ENST00000338850 RND2P52198 227 aa9.09□□□□□ -0.95
RTN3-201ENST00000338850 HBG1P69891 147 aa9.09□□□□□ -0.95
RTN3-201ENST00000338850 HBG2P69892 147 aa9.09□□□□□ -0.95
RTN3-201ENST00000338850 ICAM4Q14773 271 aa9.09□□□□□ -0.95
RTN3-201ENST00000338850 TBC1D28Q2M2D7 210 aa9.09□□□□□ -0.95
RTN3-201ENST00000338850 CXorf66Q5JRM2 361 aaPredicted RBP9.09□□□□□ -0.95
RTN3-201ENST00000338850 FBXW9Q5XUX1 488 aa9.09□□□□□ -0.95
RTN3-201ENST00000338850 C1orf174Q8IYL3 243 aa9.09□□□□□ -0.95
RTN3-201ENST00000338850 NEK7Q8TDX7 302 aa9.09□□□□□ -0.95
RTN3-201ENST00000338850 TCTEX1D2Q8WW35 142 aa9.09□□□□□ -0.95
RTN3-201ENST00000338850 GPR146Q96CH1 333 aa9.09□□□□□ -0.95
RTN3-201ENST00000338850 TVP23CQ96ET8 276 aa9.09□□□□□ -0.95
RTN3-201ENST00000338850 SPOCK3Q9BQ16 436 aa9.09□□□□□ -0.95
RTN3-201ENST00000338850 FBXO7Q9Y3I1 522 aa9.09□□□□□ -0.95
RTN3-201ENST00000338850 A0A1W2PPH5 198 aa9.08□□□□□ -0.96
RTN3-201ENST00000338850 ZNF503-AS2A6NEH8 195 aa9.08□□□□□ -0.96
RTN3-201ENST00000338850 FAM166BA8MTA8 275 aa9.08□□□□□ -0.96
RTN3-201ENST00000338850 IQCF6A8MYZ5 107 aa9.08□□□□□ -0.96
RTN3-201ENST00000338850 HSD17B6O14756 317 aa9.08□□□□□ -0.96
RTN3-201ENST00000338850 SYNGR2O43760 224 aa9.08□□□□□ -0.96
RTN3-201ENST00000338850 ZNF205O95201 554 aa9.08□□□□□ -0.96
RTN3-201ENST00000338850 IL18BPO95998 194 aa9.08□□□□□ -0.96
RTN3-201ENST00000338850 PGA5P0DJD9 388 aa9.08□□□□□ -0.96
RTN3-201ENST00000338850 RAC2P15153 192 aa9.08□□□□□ -0.96
RTN3-201ENST00000338850 ZNF14P17017 642 aaPredicted RBP9.08□□□□□ -0.96
RTN3-201ENST00000338850 ATP6V1FQ16864 119 aa9.08□□□□□ -0.96
RTN3-201ENST00000338850 FIP1L1Q6UN15 594 aaKnown RBP9.08□□□□□ -0.96
RTN3-201ENST00000338850 C1orf162Q8NEQ5 155 aaPredicted RBP9.08□□□□□ -0.96
RTN3-201ENST00000338850 CA5BP1Q8WTZ4 195 aa9.08□□□□□ -0.96
RTN3-201ENST00000338850 NIPSNAP3BQ9BS92 247 aa9.08□□□□□ -0.96
RTN3-201ENST00000338850 MRPL37Q9BZE1 423 aaKnown RBP9.08□□□□□ -0.96
RTN3-201ENST00000338850 DEFB127Q9H1M4 99 aa9.08□□□□□ -0.96
RTN3-201ENST00000338850 ZDHHC11Q9H8X9 412 aa9.08□□□□□ -0.96
RTN3-201ENST00000338850 CALHM2Q9HA72 323 aa9.08□□□□□ -0.96
RTN3-201ENST00000338850 HES4Q9HCC6 221 aa9.08□□□□□ -0.96
RTN3-201ENST00000338850 CRIM1Q9NZV1 1036 aa9.08□□□□□ -0.96
RTN3-201ENST00000338850 LAMP3Q9UQV4 416 aa9.08□□□□□ -0.96
RTN3-201ENST00000338850 F8P00451 2351 aa9.08□□□□□ -0.96
RTN3-201ENST00000338850 A6NLC8 198 aa9.07□□□□□ -0.96
RTN3-201ENST00000338850 H3BQ15 152 aa9.07□□□□□ -0.96
RTN3-201ENST00000338850 OR2C1O95371 312 aa9.07□□□□□ -0.96
RTN3-201ENST00000338850 NGFP01138 241 aa9.07□□□□□ -0.96
RTN3-201ENST00000338850 IFNA1P01562 189 aa9.07□□□□□ -0.96
RTN3-201ENST00000338850 IGLV2-14P01704 120 aa9.07□□□□□ -0.96
RTN3-201ENST00000338850 P0C879 139 aa9.07□□□□□ -0.96
RTN3-201ENST00000338850 BCL2P10415 239 aa9.07□□□□□ -0.96
RTN3-201ENST00000338850 MAGEA5P43359 124 aa9.07□□□□□ -0.96
RTN3-201ENST00000338850 PRSS12P56730 875 aa9.07□□□□□ -0.96
RTN3-201ENST00000338850 CD81P60033 236 aa9.07□□□□□ -0.96
RTN3-201ENST00000338850 KRTAP10-9P60411 292 aa9.07□□□□□ -0.96
RTN3-201ENST00000338850 SNRPEP62304 92 aaKnown RBP9.07□□□□□ -0.96
RTN3-201ENST00000338850 PLGLB1Q02325 96 aa9.07□□□□□ -0.96
RTN3-201ENST00000338850 TESK1Q15569 626 aa9.07□□□□□ -0.96
RTN3-201ENST00000338850 LRRC75BQ2VPJ9 315 aa9.07□□□□□ -0.96
RTN3-201ENST00000338850 CLEC9AQ6UXN8 241 aa9.07□□□□□ -0.96
RTN3-201ENST00000338850 RPRMLQ8N4K4 120 aa9.07□□□□□ -0.96
RTN3-201ENST00000338850 ZNF525Q8N782 197 aa9.07□□□□□ -0.96
RTN3-201ENST00000338850 WDR31Q8NA23 367 aa9.07□□□□□ -0.96
RTN3-201ENST00000338850 CD300LFQ8TDQ1 290 aa9.07□□□□□ -0.96
RTN3-201ENST00000338850 GMPPAQ96IJ6 420 aaPredicted RBP9.07□□□□□ -0.96
RTN3-201ENST00000338850 AGMATQ9BSE5 352 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms