RNA–Protein interactions for RNA: ENST00000337526.10

RTN4-202, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,790 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-202ENST00000337526 FGFRL1Q8N441 504 aa11.87□□□□□ -0.51
RTN4-202ENST00000337526 STXBP6Q8NFX7 210 aa11.87□□□□□ -0.51
RTN4-202ENST00000337526 ZMAT5Q9UDW3 170 aaKnown RBP11.87□□□□□ -0.51
RTN4-202ENST00000337526 IL19Q9UHD0 177 aa11.87□□□□□ -0.51
RTN4-202ENST00000337526 INSIG2Q9Y5U4 225 aa11.87□□□□□ -0.51
RTN4-202ENST00000337526 ABCA1O95477 2261 aa11.87□□□□□ -0.51
RTN4-202ENST00000337526 NPIPB13A6NJU9 1138 aa11.87□□□□□ -0.51
RTN4-202ENST00000337526 NPIPB4C9JG80 1138 aa11.87□□□□□ -0.51
RTN4-202ENST00000337526 NDUFB4O95168 129 aa11.87□□□□□ -0.51
RTN4-202ENST00000337526 OR2H2O95918 312 aa11.87□□□□□ -0.51
RTN4-202ENST00000337526 TBX6O95947 436 aaPredicted RBP11.87□□□□□ -0.51
RTN4-202ENST00000337526 UCP2P55851 309 aa11.87□□□□□ -0.51
RTN4-202ENST00000337526 COL10A1Q03692 680 aa11.87□□□□□ -0.51
RTN4-202ENST00000337526 PMS2CLQ68D20 193 aa11.87□□□□□ -0.51
RTN4-202ENST00000337526 C5orf17Q8NAS9 161 aa11.87□□□□□ -0.51
RTN4-202ENST00000337526 OR2D3Q8NGH3 330 aa11.87□□□□□ -0.51
RTN4-202ENST00000337526 RND1Q92730 232 aa11.87□□□□□ -0.51
RTN4-202ENST00000337526 AICDAQ9GZX7 198 aa11.87□□□□□ -0.51
RTN4-202ENST00000337526 WIPI2Q9Y4P8 454 aa11.87□□□□□ -0.51
RTN4-202ENST00000337526 KIF26BQ2KJY2 2108 aa11.87□□□□□ -0.51
RTN4-202ENST00000337526 NPIPB9F8W1W9 429 aa11.87□□□□□ -0.51
RTN4-202ENST00000337526 GNG7O60262 68 aa11.87□□□□□ -0.51
RTN4-202ENST00000337526 RND3P61587 244 aa11.87□□□□□ -0.51
RTN4-202ENST00000337526 C10orf113Q5VZT2 155 aa11.87□□□□□ -0.51
RTN4-202ENST00000337526 CA5BP1Q8WTZ4 195 aa11.87□□□□□ -0.51
RTN4-202ENST00000337526 TAF15Q92804 592 aaKnown RBP eCLIP11.87□□□□□ -0.51
RTN4-202ENST00000337526 GPR146Q96CH1 333 aa11.87□□□□□ -0.51
RTN4-202ENST00000337526 OR4C12Q96R67 309 aa11.87□□□□□ -0.51
RTN4-202ENST00000337526 NEUROG3Q9Y4Z2 214 aa11.87□□□□□ -0.51
RTN4-202ENST00000337526 MGST3O14880 152 aa11.86□□□□□ -0.51
RTN4-202ENST00000337526 VN1R17PQ8TDU5 208 aa11.86□□□□□ -0.51
RTN4-202ENST00000337526 RAB24Q969Q5 203 aa11.86□□□□□ -0.51
RTN4-202ENST00000337526 PARP14Q460N5 1801 aa11.86□□□□□ -0.51
RTN4-202ENST00000337526 IGSF23A1L1A6 192 aa11.86□□□□□ -0.51
RTN4-202ENST00000337526 CDK2AP1O14519 115 aa11.86□□□□□ -0.51
RTN4-202ENST00000337526 CD3EP07766 207 aa11.86□□□□□ -0.51
RTN4-202ENST00000337526 OR4A8P0C604 315 aa11.86□□□□□ -0.51
RTN4-202ENST00000337526 RPL31P62899 125 aaKnown RBP11.86□□□□□ -0.51
RTN4-202ENST00000337526 NR2C2APQ86WQ0 139 aa11.86□□□□□ -0.51
RTN4-202ENST00000337526 FGF5P12034 268 aa11.86□□□□□ -0.51
RTN4-202ENST00000337526 FHITP49789 147 aa11.86□□□□□ -0.51
RTN4-202ENST00000337526 RPS11P62280 158 aaKnown RBP eCLIP11.86□□□□□ -0.51
RTN4-202ENST00000337526 DLL3Q9NYJ7 618 aa11.86□□□□□ -0.51
RTN4-202ENST00000337526 MED12Q93074 2177 aa11.86□□□□□ -0.51
RTN4-202ENST00000337526 RAB29O14966 203 aa11.86□□□□□ -0.51
RTN4-202ENST00000337526 PRSS1P07477 247 aa11.86□□□□□ -0.51
RTN4-202ENST00000337526 UNC119Q13432 240 aa11.86□□□□□ -0.51
RTN4-202ENST00000337526 NFAM1Q8NET5 270 aaPredicted RBP11.86□□□□□ -0.51
RTN4-202ENST00000337526 PXMP4Q9Y6I8 212 aa11.86□□□□□ -0.51
RTN4-202ENST00000337526 TMEM229AB2RXF0 380 aa11.85□□□□□ -0.51
RTN4-202ENST00000337526 HIST1H1EP10412 219 aaKnown RBP11.85□□□□□ -0.51
RTN4-202ENST00000337526 ZNF708P17019 499 aa11.85□□□□□ -0.51
RTN4-202ENST00000337526 MS4A5Q9H3V2 200 aa11.85□□□□□ -0.51
RTN4-202ENST00000337526 SMPD2O60906 423 aa11.85□□□□□ -0.51
RTN4-202ENST00000337526 MPDU1O75352 247 aa11.85□□□□□ -0.51
RTN4-202ENST00000337526 DANCRP0C864 163 aa11.85□□□□□ -0.51
RTN4-202ENST00000337526 WNT5AP41221 380 aa11.85□□□□□ -0.51
RTN4-202ENST00000337526 FAM214BQ7L5A3 538 aa11.85□□□□□ -0.51
RTN4-202ENST00000337526 POC1AQ8NBT0 407 aa11.85□□□□□ -0.51
RTN4-202ENST00000337526 CDX2Q99626 313 aaPredicted RBP11.85□□□□□ -0.51
RTN4-202ENST00000337526 M0QZK8 103 aa11.85□□□□□ -0.51
RTN4-202ENST00000337526 GGCTO75223 188 aaKnown RBP11.85□□□□□ -0.51
RTN4-202ENST00000337526 ACP1P24666 158 aa11.85□□□□□ -0.51
RTN4-202ENST00000337526 MFAP2P55001 183 aa11.85□□□□□ -0.51
RTN4-202ENST00000337526 ZNF826PQ6ZT77 177 aa11.85□□□□□ -0.51
RTN4-202ENST00000337526 OR8I2Q8N0Y5 310 aa11.85□□□□□ -0.51
RTN4-202ENST00000337526 PERPQ96FX8 193 aa11.85□□□□□ -0.51
RTN4-202ENST00000337526 TBX15Q96SF7 602 aa11.85□□□□□ -0.51
RTN4-202ENST00000337526 RARRES2Q99969 163 aa11.85□□□□□ -0.51
RTN4-202ENST00000337526 RASL11BQ9BPW5 248 aa11.85□□□□□ -0.51
RTN4-202ENST00000337526 HOXD4P09016 255 aaPredicted RBP11.84□□□□□ -0.51
RTN4-202ENST00000337526 APELAP0DMC3 54 aa11.84□□□□□ -0.51
RTN4-202ENST00000337526 MPV17P39210 176 aa11.84□□□□□ -0.51
RTN4-202ENST00000337526 MARS2Q96GW9 593 aaKnown RBP11.84□□□□□ -0.51
RTN4-202ENST00000337526 SPSB2Q99619 263 aa11.84□□□□□ -0.51
RTN4-202ENST00000337526 RAB1BQ9H0U4 201 aa11.84□□□□□ -0.51
RTN4-202ENST00000337526 SH3BGRL3Q9H299 93 aa11.84□□□□□ -0.51
RTN4-202ENST00000337526 OTOFQ9HC10 1997 aa11.84□□□□□ -0.51
RTN4-202ENST00000337526 NPBWR2P48146 333 aa11.84□□□□□ -0.51
RTN4-202ENST00000337526 REG1BP48304 166 aa11.84□□□□□ -0.51
RTN4-202ENST00000337526 SELENOHQ8IZQ5 122 aaKnown RBP11.84□□□□□ -0.51
RTN4-202ENST00000337526 OR51B2Q9Y5P1 312 aa11.84□□□□□ -0.51
RTN4-202ENST00000337526 POLEQ07864 2286 aa11.84□□□□□ -0.51
RTN4-202ENST00000337526 INTS1Q8N201 2190 aaKnown RBP11.84□□□□□ -0.51
RTN4-202ENST00000337526 GOSR1O95249 250 aa11.84□□□□□ -0.51
RTN4-202ENST00000337526 IGHMP01871 453 aa11.84□□□□□ -0.51
RTN4-202ENST00000337526 PCGF1Q9BSM1 259 aa11.84□□□□□ -0.51
RTN4-202ENST00000337526 CACNA1GO43497 2377 aa11.84□□□□□ -0.51
RTN4-202ENST00000337526 SNRPCP09234 159 aaKnown RBP11.84□□□□□ -0.51
RTN4-202ENST00000337526 SLC35B1P78383 322 aa11.84□□□□□ -0.51
RTN4-202ENST00000337526 CCL8P80075 99 aa11.84□□□□□ -0.51
RTN4-202ENST00000337526 IZUMO4Q1ZYL8 232 aa11.84□□□□□ -0.51
RTN4-202ENST00000337526 C2orf68Q2NKX9 166 aa11.84□□□□□ -0.51
RTN4-202ENST00000337526 VWA1Q6PCB0 445 aa11.84□□□□□ -0.51
RTN4-202ENST00000337526 LINC00518Q8N0U6 118 aa11.84□□□□□ -0.51
RTN4-202ENST00000337526 OR2V2Q96R30 315 aa11.84□□□□□ -0.51
RTN4-202ENST00000337526 NPTNQ9Y639 398 aa11.84□□□□□ -0.51
RTN4-202ENST00000337526 SPTAN1Q13813 2472 aaKnown RBP11.84□□□□□ -0.51
RTN4-202ENST00000337526 A0A1W2PQM1 296 aa11.83□□□□□ -0.51
RTN4-202ENST00000337526 MSGN1A6NI15 193 aa11.83□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms