RNA–Protein interactions for RNA: ENST00000333213.10

TSEN54-201, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSEN54, Length 1,944 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-201ENST00000333213 THAP6Q8TBB0 222 aa19.21■□□□□ 0.67
TSEN54-201ENST00000333213 DOPEY2Q9Y3R5 2298 aa19.2■□□□□ 0.66
TSEN54-201ENST00000333213 DBX1A6NMT0 343 aa19.2■□□□□ 0.66
TSEN54-201ENST00000333213 MPTX1A8MV57 137 aa19.2■□□□□ 0.66
TSEN54-201ENST00000333213 ZNF728P0DKX0 622 aa19.2■□□□□ 0.66
TSEN54-201ENST00000333213 PGAM2P15259 253 aa19.2■□□□□ 0.66
TSEN54-201ENST00000333213 CEACAM6P40199 344 aa19.2■□□□□ 0.66
TSEN54-201ENST00000333213 CYCSP99999 105 aaKnown RBP19.2■□□□□ 0.66
TSEN54-201ENST00000333213 UTF1Q5T230 341 aa19.2■□□□□ 0.66
TSEN54-201ENST00000333213 TRAT1Q6PIZ9 186 aa19.2■□□□□ 0.66
TSEN54-201ENST00000333213 CORO2AQ92828 525 aa19.2■□□□□ 0.66
TSEN54-201ENST00000333213 TIMD4Q96H15 378 aa19.2■□□□□ 0.66
TSEN54-201ENST00000333213 CALYQ9NYX4 217 aa19.2■□□□□ 0.66
TSEN54-201ENST00000333213 OR2W1Q9Y3N9 320 aa19.2■□□□□ 0.66
TSEN54-201ENST00000333213 IGHV3-43A0A0B4J1X8 118 aa19.19■□□□□ 0.66
TSEN54-201ENST00000333213 RAB19A4D1S5 217 aa19.19■□□□□ 0.66
TSEN54-201ENST00000333213 TOR1AO14656 332 aa19.19■□□□□ 0.66
TSEN54-201ENST00000333213 HSPA12AO43301 675 aa19.19■□□□□ 0.66
TSEN54-201ENST00000333213 IGHV3-43DP0DP04 118 aa19.19■□□□□ 0.66
TSEN54-201ENST00000333213 GNRHRP30968 328 aa19.19■□□□□ 0.66
TSEN54-201ENST00000333213 ECI1P42126 302 aa19.19■□□□□ 0.66
TSEN54-201ENST00000333213 UCP3P55916 312 aa19.19■□□□□ 0.66
TSEN54-201ENST00000333213 KRTAP10-9P60411 292 aa19.19■□□□□ 0.66
TSEN54-201ENST00000333213 HERV-K104P61576 105 aa19.19■□□□□ 0.66
TSEN54-201ENST00000333213 RPL31P62899 125 aaKnown RBP19.19■□□□□ 0.66
TSEN54-201ENST00000333213 TMEM155Q4W5P6 130 aa19.19■□□□□ 0.66
TSEN54-201ENST00000333213 STOML3Q8TAV4 291 aa19.19■□□□□ 0.66
TSEN54-201ENST00000333213 SCGB3A2Q96PL1 93 aa19.19■□□□□ 0.66
TSEN54-201ENST00000333213 ZC4H2Q9NQZ6 224 aa19.19■□□□□ 0.66
TSEN54-201ENST00000333213 TRGV10A0A0A0MS01 117 aa19.19■□□□□ 0.66
TSEN54-201ENST00000333213 A0A0B4J2A0 478 aa19.19■□□□□ 0.66
TSEN54-201ENST00000333213 TEX46H3BTG2 121 aa19.19■□□□□ 0.66
TSEN54-201ENST00000333213 CTSDP07339 412 aaPredicted RBP19.19■□□□□ 0.66
TSEN54-201ENST00000333213 WNT2P09544 360 aa19.19■□□□□ 0.66
TSEN54-201ENST00000333213 RPS2P15880 293 aaKnown RBP19.19■□□□□ 0.66
TSEN54-201ENST00000333213 LUMP51884 338 aaPredicted RBP19.19■□□□□ 0.66
TSEN54-201ENST00000333213 ERVFRD-1P60508 538 aa19.19■□□□□ 0.66
TSEN54-201ENST00000333213 SUPT4H1P63272 117 aaKnown RBP19.19■□□□□ 0.66
TSEN54-201ENST00000333213 LTC4SQ16873 150 aa19.19■□□□□ 0.66
TSEN54-201ENST00000333213 ARPC5LQ9BPX5 153 aa19.19■□□□□ 0.66
TSEN54-201ENST00000333213 OR2S2Q9NQN1 319 aa19.19■□□□□ 0.66
TSEN54-201ENST00000333213 SHPKQ9UHJ6 478 aa19.19■□□□□ 0.66
TSEN54-201ENST00000333213 KBTBD11-OT1A0A1B0GTJ5 212 aa19.18■□□□□ 0.66
TSEN54-201ENST00000333213 SPINT2O43291 252 aa19.18■□□□□ 0.66
TSEN54-201ENST00000333213 LOXL3P58215 753 aa19.18■□□□□ 0.66
TSEN54-201ENST00000333213 TMEM200BQ69YZ2 307 aa19.18■□□□□ 0.66
TSEN54-201ENST00000333213 INO80EQ8NBZ0 244 aaPredicted RBP19.18■□□□□ 0.66
TSEN54-201ENST00000333213 SECTM1Q8WVN6 248 aa19.18■□□□□ 0.66
TSEN54-201ENST00000333213 H1FXQ92522 213 aaKnown RBP19.18■□□□□ 0.66
TSEN54-201ENST00000333213 RSRP1Q9BUV0 290 aa19.18■□□□□ 0.66
TSEN54-201ENST00000333213 NMES1Q9C002 83 aa19.18■□□□□ 0.66
TSEN54-201ENST00000333213 TOLLIPQ9H0E2 274 aa19.18■□□□□ 0.66
TSEN54-201ENST00000333213 CLN8Q9UBY8 286 aa19.18■□□□□ 0.66
TSEN54-201ENST00000333213 NUDT19A8MXV4 375 aa19.17■□□□□ 0.66
TSEN54-201ENST00000333213 F2RL2O00254 374 aa19.17■□□□□ 0.66
TSEN54-201ENST00000333213 PPP1CCP36873 323 aaKnown RBP19.17■□□□□ 0.66
TSEN54-201ENST00000333213 GPR6P46095 362 aaPredicted RBP19.17■□□□□ 0.66
TSEN54-201ENST00000333213 HTD2P86397 168 aa19.17■□□□□ 0.66
TSEN54-201ENST00000333213 TMEM128Q5BJH2 165 aa19.17■□□□□ 0.66
TSEN54-201ENST00000333213 OR10V1Q8NGI7 309 aa19.17■□□□□ 0.66
TSEN54-201ENST00000333213 ZNF471Q9BX82 626 aaPredicted RBP19.17■□□□□ 0.66
TSEN54-201ENST00000333213 TAS2R3Q9NYW6 316 aa19.17■□□□□ 0.66
TSEN54-201ENST00000333213 LINC00312Q9Y6C7 94 aa19.17■□□□□ 0.66
TSEN54-201ENST00000333213 GCN1Q92616 2671 aaKnown RBP19.17■□□□□ 0.66
TSEN54-201ENST00000333213 hADV38S2A0JD32 116 aa19.17■□□□□ 0.66
TSEN54-201ENST00000333213 MMP23AO75900 390 aa19.17■□□□□ 0.66
TSEN54-201ENST00000333213 IGLV2-14P01704 120 aa19.17■□□□□ 0.66
TSEN54-201ENST00000333213 MEF2CQ06413 473 aaPredicted RBP19.17■□□□□ 0.66
TSEN54-201ENST00000333213 ZNF818PQ6ZRF7 136 aa19.17■□□□□ 0.66
TSEN54-201ENST00000333213 LINC00574Q9H8X3 128 aa19.17■□□□□ 0.66
TSEN54-201ENST00000333213 CCL28Q9NRJ3 127 aa19.17■□□□□ 0.66
TSEN54-201ENST00000333213 CCL3L1P16619 93 aa19.16■□□□□ 0.66
TSEN54-201ENST00000333213 PIGPP57054 158 aa19.16■□□□□ 0.66
TSEN54-201ENST00000333213 PHLDA2Q53GA4 152 aa19.16■□□□□ 0.66
TSEN54-201ENST00000333213 HIST2H2BCQ6DN03 193 aa19.16■□□□□ 0.66
TSEN54-201ENST00000333213 SLC2A9Q9NRM0 540 aa19.16■□□□□ 0.66
TSEN54-201ENST00000333213 MIOXQ9UGB7 285 aa19.16■□□□□ 0.66
TSEN54-201ENST00000333213 C14orf166Q9Y224 244 aaKnown RBP19.16■□□□□ 0.66
TSEN54-201ENST00000333213 MALRD1Q5VYJ5 2156 aa19.16■□□□□ 0.66
TSEN54-201ENST00000333213 PSMB6P28072 239 aa19.15■□□□□ 0.66
TSEN54-201ENST00000333213 ZNF787Q6DD87 383 aa19.15■□□□□ 0.66
TSEN54-201ENST00000333213 GPHA2Q96T91 129 aa19.15■□□□□ 0.66
TSEN54-201ENST00000333213 SLC5A7Q9GZV3 580 aa19.15■□□□□ 0.66
TSEN54-201ENST00000333213 MS4A7Q9GZW8 240 aaPredicted RBP19.15■□□□□ 0.66
TSEN54-201ENST00000333213 UBE2J1Q9Y385 318 aaPredicted RBP19.15■□□□□ 0.66
TSEN54-201ENST00000333213 ZNF729A6NN14 1252 aaPredicted RBP19.15■□□□□ 0.66
TSEN54-201ENST00000333213 CCSO14618 274 aa19.15■□□□□ 0.66
TSEN54-201ENST00000333213 FGF16O43320 207 aa19.15■□□□□ 0.66
TSEN54-201ENST00000333213 APOC3P02656 99 aa19.15■□□□□ 0.66
TSEN54-201ENST00000333213 WDR25Q64LD2 544 aaPredicted RBP19.15■□□□□ 0.66
TSEN54-201ENST00000333213 MARC2Q969Z3 335 aa19.15■□□□□ 0.66
TSEN54-201ENST00000333213 NEIL1Q96FI4 390 aaPredicted RBP19.15■□□□□ 0.66
TSEN54-201ENST00000333213 SEC22AQ96IW7 307 aa19.15■□□□□ 0.66
TSEN54-201ENST00000333213 BPESC1Q9GZL8 116 aa19.15■□□□□ 0.66
TSEN54-201ENST00000333213 PATZ1Q9HBE1 687 aaKnown RBP19.15■□□□□ 0.66
TSEN54-201ENST00000333213 PTPN13Q12923 2485 aa19.15■□□□□ 0.66
TSEN54-201ENST00000333213 TEX13DA0A0J9YY54 714 aaPredicted RBP19.14■□□□□ 0.65
TSEN54-201ENST00000333213 OR8U9P0C7N5 309 aa19.14■□□□□ 0.65
TSEN54-201ENST00000333213 VAMP1P23763 118 aa19.14■□□□□ 0.65
TSEN54-201ENST00000333213 OR8U1Q8NH10 309 aa19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms