RNA–Protein interactions for RNA: ENST00000329399.6

PDLIM1-201, Transcript of PDZ and LIM domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM1, Length 1,452 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-201ENST00000329399 PIPOXQ9P0Z9 390 aa13.55□□□□□ -0.24
PDLIM1-201ENST00000329399 DUXBA0A1W2PPF3 345 aa13.55□□□□□ -0.24
PDLIM1-201ENST00000329399 C12orf77C9JDV5 145 aa13.55□□□□□ -0.24
PDLIM1-201ENST00000329399 ITGB1BP1O14713 200 aa13.55□□□□□ -0.24
PDLIM1-201ENST00000329399 MPPED1O15442 326 aa13.55□□□□□ -0.24
PDLIM1-201ENST00000329399 IFNA21P01568 189 aa13.55□□□□□ -0.24
PDLIM1-201ENST00000329399 HBZP02008 142 aa13.55□□□□□ -0.24
PDLIM1-201ENST00000329399 DVL1P1P54792 670 aaPredicted RBP13.55□□□□□ -0.24
PDLIM1-201ENST00000329399 H2BFSP57053 126 aa13.55□□□□□ -0.24
PDLIM1-201ENST00000329399 ESCO2Q56NI9 601 aa13.55□□□□□ -0.24
PDLIM1-201ENST00000329399 LY6G6FQ5SQ64 297 aa13.55□□□□□ -0.24
PDLIM1-201ENST00000329399 OR10A7Q8NGE5 316 aa13.55□□□□□ -0.24
PDLIM1-201ENST00000329399 IL1F10Q8WWZ1 152 aa13.55□□□□□ -0.24
PDLIM1-201ENST00000329399 EDARADDQ8WWZ3 215 aa13.55□□□□□ -0.24
PDLIM1-201ENST00000329399 GAFA1Q96PS6 74 aa13.55□□□□□ -0.24
PDLIM1-201ENST00000329399 NMES1Q9C002 83 aa13.55□□□□□ -0.24
PDLIM1-201ENST00000329399 PATZ1Q9HBE1 687 aaKnown RBP13.55□□□□□ -0.24
PDLIM1-201ENST00000329399 MMP26Q9NRE1 261 aa13.55□□□□□ -0.24
PDLIM1-201ENST00000329399 COMMD9Q9P000 198 aa13.55□□□□□ -0.24
PDLIM1-201ENST00000329399 MAB21L2Q9Y586 359 aa13.55□□□□□ -0.24
PDLIM1-201ENST00000329399 RNF212BA8MTL3 300 aa13.54□□□□□ -0.24
PDLIM1-201ENST00000329399 HMSDA8MTL9 139 aa13.54□□□□□ -0.24
PDLIM1-201ENST00000329399 F5H0A9 414 aaPredicted RBP13.54□□□□□ -0.24
PDLIM1-201ENST00000329399 PHF1O43189 567 aaPredicted RBP13.54□□□□□ -0.24
PDLIM1-201ENST00000329399 FCN3O75636 299 aa13.54□□□□□ -0.24
PDLIM1-201ENST00000329399 PI3P19957 117 aa13.54□□□□□ -0.24
PDLIM1-201ENST00000329399 GLIPR1P48060 266 aa13.54□□□□□ -0.24
PDLIM1-201ENST00000329399 TMEM155Q4W5P6 130 aa13.54□□□□□ -0.24
PDLIM1-201ENST00000329399 LGI3Q8N145 548 aa13.54□□□□□ -0.24
PDLIM1-201ENST00000329399 SECTM1Q8WVN6 248 aa13.54□□□□□ -0.24
PDLIM1-201ENST00000329399 IL22RA2Q969J5 263 aa13.54□□□□□ -0.24
PDLIM1-201ENST00000329399 ARL11Q969Q4 196 aa13.54□□□□□ -0.24
PDLIM1-201ENST00000329399 PDCD10Q9BUL8 212 aa13.54□□□□□ -0.24
PDLIM1-201ENST00000329399 RDH8Q9NYR8 311 aa13.54□□□□□ -0.24
PDLIM1-201ENST00000329399 METRNQ9UJH8 293 aa13.54□□□□□ -0.24
PDLIM1-201ENST00000329399 JPT1Q9UK76 154 aa13.54□□□□□ -0.24
PDLIM1-201ENST00000329399 DOCK11Q5JSL3 2073 aa13.53□□□□□ -0.24
PDLIM1-201ENST00000329399 IGHV3OR15-7A0A075B7D8 119 aa13.53□□□□□ -0.24
PDLIM1-201ENST00000329399 TRGV10A0A0A0MS01 117 aa13.53□□□□□ -0.24
PDLIM1-201ENST00000329399 F2RL2O00254 374 aa13.53□□□□□ -0.24
PDLIM1-201ENST00000329399 TNFRSF13BO14836 293 aaPredicted RBP13.53□□□□□ -0.24
PDLIM1-201ENST00000329399 CEACAM6P40199 344 aa13.53□□□□□ -0.24
PDLIM1-201ENST00000329399 LIAT1Q6ZQX7 453 aa13.53□□□□□ -0.24
PDLIM1-201ENST00000329399 TCTEX1D1Q8N7M0 179 aa13.53□□□□□ -0.24
PDLIM1-201ENST00000329399 LINC00574Q9H8X3 128 aa13.53□□□□□ -0.24
PDLIM1-201ENST00000329399 FAM212BQ9NTI7 297 aaPredicted RBP13.53□□□□□ -0.24
PDLIM1-201ENST00000329399 ZFP57Q9NU63 452 aa13.53□□□□□ -0.24
PDLIM1-201ENST00000329399 TAS2R3Q9NYW6 316 aa13.53□□□□□ -0.24
PDLIM1-201ENST00000329399 CDC42EP3Q9UKI2 254 aa13.53□□□□□ -0.24
PDLIM1-201ENST00000329399 UBE2J1Q9Y385 318 aaPredicted RBP13.53□□□□□ -0.24
PDLIM1-201ENST00000329399 C3orf85A0A1B0GTC6 90 aa13.52□□□□□ -0.25
PDLIM1-201ENST00000329399 hADV38S2A0JD32 116 aa13.52□□□□□ -0.25
PDLIM1-201ENST00000329399 GPR37O15354 613 aa13.52□□□□□ -0.25
PDLIM1-201ENST00000329399 TMEM187Q14656 261 aa13.52□□□□□ -0.25
PDLIM1-201ENST00000329399 SLC9A3R2Q15599 337 aa13.52□□□□□ -0.25
PDLIM1-201ENST00000329399 ZNRF1Q8ND25 227 aa13.52□□□□□ -0.25
PDLIM1-201ENST00000329399 OR52M1Q8NGK5 317 aa13.52□□□□□ -0.25
PDLIM1-201ENST00000329399 RAB39BQ96DA2 213 aa13.52□□□□□ -0.25
PDLIM1-201ENST00000329399 CHIAQ9BZP6 476 aa13.52□□□□□ -0.25
PDLIM1-201ENST00000329399 METTL8Q9H825 291 aaKnown RBP13.52□□□□□ -0.25
PDLIM1-201ENST00000329399 RBM7Q9Y580 266 aaKnown RBP13.52□□□□□ -0.25
PDLIM1-201ENST00000329399 ZNF729A6NN14 1252 aaPredicted RBP13.51□□□□□ -0.25
PDLIM1-201ENST00000329399 C15orf65H3BRN8 121 aa13.51□□□□□ -0.25
PDLIM1-201ENST00000329399 YPEL1O60688 119 aa13.51□□□□□ -0.25
PDLIM1-201ENST00000329399 GYPAP02724 150 aa13.51□□□□□ -0.25
PDLIM1-201ENST00000329399 TFF1P04155 84 aa13.51□□□□□ -0.25
PDLIM1-201ENST00000329399 PET100P0DJ07 73 aa13.51□□□□□ -0.25
PDLIM1-201ENST00000329399 CGB3P0DN86 165 aa13.51□□□□□ -0.25
PDLIM1-201ENST00000329399 CGB7P0DN87 165 aa13.51□□□□□ -0.25
PDLIM1-201ENST00000329399 SRSF2Q01130 221 aaKnown RBP13.51□□□□□ -0.25
PDLIM1-201ENST00000329399 EDDM3AQ14507 147 aa13.51□□□□□ -0.25
PDLIM1-201ENST00000329399 C2orf68Q2NKX9 166 aa13.51□□□□□ -0.25
PDLIM1-201ENST00000329399 ANKRD55Q3KP44 614 aa13.51□□□□□ -0.25
PDLIM1-201ENST00000329399 LRRC10Q5BKY1 277 aa13.51□□□□□ -0.25
PDLIM1-201ENST00000329399 TMEM65Q6PI78 240 aa13.51□□□□□ -0.25
PDLIM1-201ENST00000329399 ZNF841Q6ZN19 808 aa13.51□□□□□ -0.25
PDLIM1-201ENST00000329399 OR13A1Q8NGR1 328 aa13.51□□□□□ -0.25
PDLIM1-201ENST00000329399 MRGPRDQ8TDS7 321 aa13.51□□□□□ -0.25
PDLIM1-201ENST00000329399 C2orf50Q96LR7 162 aa13.51□□□□□ -0.25
PDLIM1-201ENST00000329399 TMEM56Q96MV1 263 aa13.51□□□□□ -0.25
PDLIM1-201ENST00000329399 YPEL2Q96QA6 119 aa13.51□□□□□ -0.25
PDLIM1-201ENST00000329399 GON7Q9BXV9 100 aa13.51□□□□□ -0.25
PDLIM1-201ENST00000329399 TMEM222Q9H0R3 208 aa13.51□□□□□ -0.25
PDLIM1-201ENST00000329399 TMED3Q9Y3Q3 217 aa13.51□□□□□ -0.25
PDLIM1-201ENST00000329399 LINC00312Q9Y6C7 94 aa13.51□□□□□ -0.25
PDLIM1-201ENST00000329399 TMEM56-RWDD3S4R434 201 aa13.51□□□□□ -0.25
PDLIM1-201ENST00000329399 A0A1B0GW55 424 aa13.5□□□□□ -0.25
PDLIM1-201ENST00000329399 C5orf51A6NDU8 294 aa13.5□□□□□ -0.25
PDLIM1-201ENST00000329399 H0Y980 276 aa13.5□□□□□ -0.25
PDLIM1-201ENST00000329399 NDUFB3O43676 98 aa13.5□□□□□ -0.25
PDLIM1-201ENST00000329399 DUX4L2P0CJ85 424 aa13.5□□□□□ -0.25
PDLIM1-201ENST00000329399 DUX4L3P0CJ86 424 aa13.5□□□□□ -0.25
PDLIM1-201ENST00000329399 DUX4L4P0CJ87 422 aa13.5□□□□□ -0.25
PDLIM1-201ENST00000329399 DUX4L5P0CJ88 424 aa13.5□□□□□ -0.25
PDLIM1-201ENST00000329399 DUX4L6P0CJ89 424 aa13.5□□□□□ -0.25
PDLIM1-201ENST00000329399 DUX4L7P0CJ90 424 aa13.5□□□□□ -0.25
PDLIM1-201ENST00000329399 SLC25A4P12235 298 aa13.5□□□□□ -0.25
PDLIM1-201ENST00000329399 EDDM3BP56851 147 aa13.5□□□□□ -0.25
PDLIM1-201ENST00000329399 Q3ZCU0 254 aa13.5□□□□□ -0.25
PDLIM1-201ENST00000329399 PHLDA2Q53GA4 152 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms