RNA–Protein interactions for RNA: ENST00000328923.7

SHMT2-201, Transcript of serine hydroxymethyltransferase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHMT2, Length 2,537 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-201ENST00000328923 GNB4Q9HAV0 340 aa10.13□□□□□ -0.79
SHMT2-201ENST00000328923 POLR1DQ9Y2S0 133 aa10.13□□□□□ -0.79
SHMT2-201ENST00000328923 KIAA1549Q9HCM3 1950 aa10.13□□□□□ -0.79
SHMT2-201ENST00000328923 A0A1W2PQF6 199 aa10.13□□□□□ -0.79
SHMT2-201ENST00000328923 A0A1W2PQU0 124 aa10.13□□□□□ -0.79
SHMT2-201ENST00000328923 TLX3O43711 291 aaPredicted RBP10.13□□□□□ -0.79
SHMT2-201ENST00000328923 IGHMP01871 453 aa10.13□□□□□ -0.79
SHMT2-201ENST00000328923 PHLDA2Q53GA4 152 aa10.13□□□□□ -0.79
SHMT2-201ENST00000328923 DAZLQ92904 295 aaKnown RBP10.13□□□□□ -0.79
SHMT2-201ENST00000328923 PHF7Q9BWX1 381 aaPredicted RBP10.13□□□□□ -0.79
SHMT2-201ENST00000328923 PEF1Q9UBV8 284 aaKnown RBP10.13□□□□□ -0.79
SHMT2-201ENST00000328923 CPAMD8Q8IZJ3 1885 aa10.13□□□□□ -0.79
SHMT2-201ENST00000328923 SLC16A7O60669 478 aa10.12□□□□□ -0.79
SHMT2-201ENST00000328923 NXPH3O95157 252 aa10.12□□□□□ -0.79
SHMT2-201ENST00000328923 TMEM50AO95807 157 aa10.12□□□□□ -0.79
SHMT2-201ENST00000328923 MT-ATP6P00846 226 aa10.12□□□□□ -0.79
SHMT2-201ENST00000328923 FBLP22087 321 aaKnown RBP10.12□□□□□ -0.79
SHMT2-201ENST00000328923 FUT6P51993 359 aa10.12□□□□□ -0.79
SHMT2-201ENST00000328923 ARF1P84077 181 aaKnown RBP10.12□□□□□ -0.79
SHMT2-201ENST00000328923 SGCBQ16585 318 aa10.12□□□□□ -0.79
SHMT2-201ENST00000328923 CEACAM21Q3KPI0 293 aa10.12□□□□□ -0.79
SHMT2-201ENST00000328923 LIAT1Q6ZQX7 453 aa10.12□□□□□ -0.79
SHMT2-201ENST00000328923 OR10V1Q8NGI7 309 aa10.12□□□□□ -0.79
SHMT2-201ENST00000328923 GATAD1Q8WUU5 269 aa10.12□□□□□ -0.79
SHMT2-201ENST00000328923 CACNG8Q8WXS5 425 aa10.12□□□□□ -0.79
SHMT2-201ENST00000328923 KLHDC7BQ96G42 594 aa10.12□□□□□ -0.79
SHMT2-201ENST00000328923 RCHY1Q96PM5 261 aa10.12□□□□□ -0.79
SHMT2-201ENST00000328923 LIME1Q9H400 295 aa10.12□□□□□ -0.79
SHMT2-201ENST00000328923 SS18L2Q9UHA2 77 aa10.12□□□□□ -0.79
SHMT2-201ENST00000328923 PPP1R3CQ9UQK1 317 aa10.12□□□□□ -0.79
SHMT2-201ENST00000328923 F5P12259 2224 aa10.12□□□□□ -0.79
SHMT2-201ENST00000328923 PCNX3Q9H6A9 2034 aa10.12□□□□□ -0.79
SHMT2-201ENST00000328923 TRAV36DV7A0A075B6V5 113 aa10.12□□□□□ -0.79
SHMT2-201ENST00000328923 TRAV9-2A0A087WT02 112 aa10.12□□□□□ -0.79
SHMT2-201ENST00000328923 NKX2-6A6NCS4 301 aa10.12□□□□□ -0.79
SHMT2-201ENST00000328923 SLC31A1O15431 190 aa10.12□□□□□ -0.79
SHMT2-201ENST00000328923 BRI3O95415 125 aa10.12□□□□□ -0.79
SHMT2-201ENST00000328923 CRYGCP07315 174 aa10.12□□□□□ -0.79
SHMT2-201ENST00000328923 IGLV3-21P80748 117 aaPredicted RBP10.12□□□□□ -0.79
SHMT2-201ENST00000328923 Q0VG73 95 aa10.12□□□□□ -0.79
SHMT2-201ENST00000328923 RAB31Q13636 194 aa10.12□□□□□ -0.79
SHMT2-201ENST00000328923 CCDC144NLQ6NUI1 221 aa10.12□□□□□ -0.79
SHMT2-201ENST00000328923 GLIPR1L1Q6UWM5 242 aa10.12□□□□□ -0.79
SHMT2-201ENST00000328923 SHISA5Q8N114 240 aa10.12□□□□□ -0.79
SHMT2-201ENST00000328923 OR4F5Q8NH21 305 aa10.12□□□□□ -0.79
SHMT2-201ENST00000328923 OR4A5Q8NH83 315 aa10.12□□□□□ -0.79
SHMT2-201ENST00000328923 OR2AE1Q8NHA4 323 aa10.12□□□□□ -0.79
SHMT2-201ENST00000328923 SPSB1Q96BD6 273 aa10.12□□□□□ -0.79
SHMT2-201ENST00000328923 TXNIPQ9H3M7 391 aa10.12□□□□□ -0.79
SHMT2-201ENST00000328923 KNL1Q8NG31 2342 aa10.12□□□□□ -0.79
SHMT2-201ENST00000328923 WDR87Q6ZQQ6 2873 aa10.12□□□□□ -0.79
SHMT2-201ENST00000328923 WDFY3Q8IZQ1 3526 aa10.11□□□□□ -0.79
SHMT2-201ENST00000328923 A0A1W2PS18 150 aa10.11□□□□□ -0.79
SHMT2-201ENST00000328923 K7EQM0 130 aa10.11□□□□□ -0.79
SHMT2-201ENST00000328923 HMGB3O15347 200 aaKnown RBP10.11□□□□□ -0.79
SHMT2-201ENST00000328923 CA2P00918 260 aa10.11□□□□□ -0.79
SHMT2-201ENST00000328923 CTLA4P16410 223 aa10.11□□□□□ -0.79
SHMT2-201ENST00000328923 CEBPDP49716 269 aaPredicted RBP10.11□□□□□ -0.79
SHMT2-201ENST00000328923 PPOXP50336 477 aa10.11□□□□□ -0.79
SHMT2-201ENST00000328923 HERV-K104P63124 156 aa10.11□□□□□ -0.79
SHMT2-201ENST00000328923 IGFBP7Q16270 282 aa10.11□□□□□ -0.79
SHMT2-201ENST00000328923 ZNF788Q6ZQV5 615 aa10.11□□□□□ -0.79
SHMT2-201ENST00000328923 FAM19A2Q8N3H0 131 aa10.11□□□□□ -0.79
SHMT2-201ENST00000328923 SMRP1Q8NCR6 262 aa10.11□□□□□ -0.79
SHMT2-201ENST00000328923 MSI2Q96DH6 328 aaKnown RBP10.11□□□□□ -0.79
SHMT2-201ENST00000328923 SIGLEC12Q96PQ1 595 aa10.11□□□□□ -0.79
SHMT2-201ENST00000328923 TBC1D29Q9UFV1 150 aa10.11□□□□□ -0.79
SHMT2-201ENST00000328923 FAM231BA6NCW3 169 aa10.11□□□□□ -0.79
SHMT2-201ENST00000328923 C1QTNF9BB2RNN3 333 aa10.11□□□□□ -0.79
SHMT2-201ENST00000328923 J3QR06 171 aa10.11□□□□□ -0.79
SHMT2-201ENST00000328923 RBMXL2O75526 392 aaKnown RBP10.11□□□□□ -0.79
SHMT2-201ENST00000328923 NRASP01111 189 aa10.11□□□□□ -0.79
SHMT2-201ENST00000328923 KRASP01116 189 aa10.11□□□□□ -0.79
SHMT2-201ENST00000328923 FRMD6-AS1P0C7T7 363 aa10.11□□□□□ -0.79
SHMT2-201ENST00000328923 C1QTNF9P0C862 333 aa10.11□□□□□ -0.79
SHMT2-201ENST00000328923 FMODQ06828 376 aa10.11□□□□□ -0.79
SHMT2-201ENST00000328923 FOXL1Q12952 345 aa10.11□□□□□ -0.79
SHMT2-201ENST00000328923 ACKR1Q16570 336 aa10.11□□□□□ -0.79
SHMT2-201ENST00000328923 ABCA11PQ4W5N1 156 aa10.11□□□□□ -0.79
SHMT2-201ENST00000328923 CXorf66Q5JRM2 361 aaPredicted RBP10.11□□□□□ -0.79
SHMT2-201ENST00000328923 FAM58AQ8N1B3 248 aa10.11□□□□□ -0.79
SHMT2-201ENST00000328923 OR10P1Q8NGE3 313 aa10.11□□□□□ -0.79
SHMT2-201ENST00000328923 BAHD1Q8TBE0 780 aaPredicted RBP10.11□□□□□ -0.79
SHMT2-201ENST00000328923 OR5P3Q8WZ94 311 aa10.11□□□□□ -0.79
SHMT2-201ENST00000328923 ZNF501Q96CX3 271 aaPredicted RBP10.11□□□□□ -0.79
SHMT2-201ENST00000328923 ADAT3Q96EY9 351 aaPredicted RBP10.11□□□□□ -0.79
SHMT2-201ENST00000328923 CLEC7AQ9BXN2 247 aa10.11□□□□□ -0.79
SHMT2-201ENST00000328923 GEMIN7Q9H840 131 aaKnown RBP10.11□□□□□ -0.79
SHMT2-201ENST00000328923 ZNF286AQ9HBT8 521 aa10.11□□□□□ -0.79
SHMT2-201ENST00000328923 KIAA1324LA8MWY0 1029 aaPredicted RBP10.1□□□□□ -0.79
SHMT2-201ENST00000328923 PLPP3O14495 311 aa10.1□□□□□ -0.79
SHMT2-201ENST00000328923 CD5LO43866 347 aa10.1□□□□□ -0.79
SHMT2-201ENST00000328923 S1PR2O95136 353 aa10.1□□□□□ -0.79
SHMT2-201ENST00000328923 PLP1P60201 277 aa10.1□□□□□ -0.79
SHMT2-201ENST00000328923 FUT7Q11130 342 aa10.1□□□□□ -0.79
SHMT2-201ENST00000328923 OR5D14Q8NGL3 314 aa10.1□□□□□ -0.79
SHMT2-201ENST00000328923 C16orf52Q8NHV5 167 aa10.1□□□□□ -0.79
SHMT2-201ENST00000328923 KCNS1Q96KK3 526 aa10.1□□□□□ -0.79
SHMT2-201ENST00000328923 TMEM59Q9BXS4 323 aa10.1□□□□□ -0.79
SHMT2-201ENST00000328923 PLEKHJ1Q9NW61 149 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms