RNA–Protein interactions for RNA: ENST00000324288.12

CIITA-201, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CIITA, Length 11,952 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-201ENST00000324288 KIR2DL1P43626 348 aaPredicted RBP6.92□□□□□ -1.3
CIITA-201ENST00000324288 KIR2DL2P43627 348 aaPredicted RBP6.92□□□□□ -1.3
CIITA-201ENST00000324288 HIKESHIQ53FT3 197 aa6.92□□□□□ -1.3
CIITA-201ENST00000324288 IL20Q9NYY1 176 aa6.92□□□□□ -1.3
CIITA-201ENST00000324288 KLK8O60259 260 aa6.92□□□□□ -1.3
CIITA-201ENST00000324288 OR8G5Q8NG78 346 aa6.92□□□□□ -1.3
CIITA-201ENST00000324288 ALKBH7Q9BT30 221 aaPredicted RBP6.92□□□□□ -1.3
CIITA-201ENST00000324288 RPP25Q9BUL9 199 aaKnown RBP6.92□□□□□ -1.3
CIITA-201ENST00000324288 COL25A1Q9BXS0 654 aaPredicted RBP6.92□□□□□ -1.3
CIITA-201ENST00000324288 ANXA10Q9UJ72 324 aa6.92□□□□□ -1.3
CIITA-201ENST00000324288 PLXNB2O15031 1838 aa6.92□□□□□ -1.3
CIITA-201ENST00000324288 SYNGR2O43760 224 aa6.92□□□□□ -1.3
CIITA-201ENST00000324288 BCL2P10415 239 aa6.92□□□□□ -1.3
CIITA-201ENST00000324288 SRIP30626 198 aa6.92□□□□□ -1.3
CIITA-201ENST00000324288 SAMD13Q5VXD3 122 aa6.92□□□□□ -1.3
CIITA-201ENST00000324288 LSM10Q969L4 123 aaKnown RBP6.92□□□□□ -1.3
CIITA-201ENST00000324288 PAXXQ9BUH6 204 aa6.92□□□□□ -1.3
CIITA-201ENST00000324288 PRDM14Q9GZV8 571 aa6.92□□□□□ -1.3
CIITA-201ENST00000324288 SAP30LQ9HAJ7 183 aa6.92□□□□□ -1.3
CIITA-201ENST00000324288 TINAGQ9UJW2 476 aa6.92□□□□□ -1.3
CIITA-201ENST00000324288 P2RX4Q99571 388 aa6.92□□□□□ -1.3
CIITA-201ENST00000324288 DHRS7CA6NNS2 312 aa6.92□□□□□ -1.3
CIITA-201ENST00000324288 PLPP3O14495 311 aa6.92□□□□□ -1.3
CIITA-201ENST00000324288 EML2O95834 649 aa6.92□□□□□ -1.3
CIITA-201ENST00000324288 FOXL2P58012 376 aa6.92□□□□□ -1.3
CIITA-201ENST00000324288 OR2Y1Q8NGV0 311 aa6.92□□□□□ -1.3
CIITA-201ENST00000324288 CXXC4Q9H2H0 198 aa6.92□□□□□ -1.3
CIITA-201ENST00000324288 V9GYH0 126 aa6.92□□□□□ -1.3
CIITA-201ENST00000324288 RECKO95980 971 aa6.91□□□□□ -1.3
CIITA-201ENST00000324288 GCGP01275 180 aa6.91□□□□□ -1.3
CIITA-201ENST00000324288 TFF2Q03403 129 aa6.91□□□□□ -1.3
CIITA-201ENST00000324288 CT55Q8WUE5 264 aa6.91□□□□□ -1.3
CIITA-201ENST00000324288 GABRG3Q99928 467 aa6.91□□□□□ -1.3
CIITA-201ENST00000324288 HIST1H1BP16401 226 aaKnown RBP6.91□□□□□ -1.3
CIITA-201ENST00000324288 CBLN1P23435 193 aa6.91□□□□□ -1.3
CIITA-201ENST00000324288 HERPUD1Q15011 391 aa6.91□□□□□ -1.3
CIITA-201ENST00000324288 RRN3P1Q2M238 152 aa6.91□□□□□ -1.3
CIITA-201ENST00000324288 LOC105371267A0A1B0GV96 52 aa6.91□□□□□ -1.3
CIITA-201ENST00000324288 FAM216AQ8WUB2 273 aa6.91□□□□□ -1.3
CIITA-201ENST00000324288 KLK13Q9UKR3 277 aa6.91□□□□□ -1.3
CIITA-201ENST00000324288 KCNK7Q9Y2U2 307 aa6.91□□□□□ -1.3
CIITA-201ENST00000324288 SELENOKQ9Y6D0 94 aa6.91□□□□□ -1.3
CIITA-201ENST00000324288 OR4C45A6NMZ5 311 aa6.91□□□□□ -1.3
CIITA-201ENST00000324288 AMY1AP04745 511 aa6.91□□□□□ -1.3
CIITA-201ENST00000324288 MDH2P40926 338 aaKnown RBP6.91□□□□□ -1.3
CIITA-201ENST00000324288 SPANXN1Q5VSR9 72 aa6.91□□□□□ -1.3
CIITA-201ENST00000324288 OR8B2Q96RD0 313 aa6.91□□□□□ -1.3
CIITA-201ENST00000324288 TMEM189A5PLL7 270 aa6.91□□□□□ -1.3
CIITA-201ENST00000324288 UBE2L6O14933 153 aa6.91□□□□□ -1.3
CIITA-201ENST00000324288 CT62P0C5K7 136 aa6.91□□□□□ -1.3
CIITA-201ENST00000324288 ZNF735P0CB33 412 aa6.91□□□□□ -1.3
CIITA-201ENST00000324288 PSG2P11465 335 aa6.91□□□□□ -1.3
CIITA-201ENST00000324288 SUMO3P55854 103 aaPredicted RBP6.91□□□□□ -1.3
CIITA-201ENST00000324288 C10orf113Q5VZT2 155 aa6.91□□□□□ -1.3
CIITA-201ENST00000324288 DMKNQ6E0U4 476 aaPredicted RBP6.91□□□□□ -1.3
CIITA-201ENST00000324288 C12orf54Q6X4T0 127 aa6.91□□□□□ -1.3
CIITA-201ENST00000324288 Q6ZNB5 142 aa6.91□□□□□ -1.3
CIITA-201ENST00000324288 PQLC2Q6ZP29 291 aa6.91□□□□□ -1.3
CIITA-201ENST00000324288 GPR3P46089 330 aa6.91□□□□□ -1.3
CIITA-201ENST00000324288 PARP11Q9NR21 331 aa6.91□□□□□ -1.3
CIITA-201ENST00000324288 FLRT3Q9NZU0 649 aa6.91□□□□□ -1.3
CIITA-201ENST00000324288 FRRS1LQ9P0K9 344 aa6.91□□□□□ -1.3
CIITA-201ENST00000324288 SIRT4Q9Y6E7 314 aaPredicted RBP6.91□□□□□ -1.3
CIITA-201ENST00000324288 A6NNC1 897 aa6.91□□□□□ -1.3
CIITA-201ENST00000324288 TMEM108Q6UXF1 575 aa6.91□□□□□ -1.3
CIITA-201ENST00000324288 TMEM136Q6ZRR5 245 aa6.91□□□□□ -1.3
CIITA-201ENST00000324288 FAM169BQ8N8A8 192 aa6.91□□□□□ -1.3
CIITA-201ENST00000324288 CDX2Q99626 313 aaPredicted RBP6.91□□□□□ -1.3
CIITA-201ENST00000324288 IL19Q9UHD0 177 aa6.91□□□□□ -1.3
CIITA-201ENST00000324288 SLC25A34Q6PIV7 304 aa6.91□□□□□ -1.3
CIITA-201ENST00000324288 PERPQ96FX8 193 aa6.91□□□□□ -1.3
CIITA-201ENST00000324288 CDIPTO14735 213 aa6.9□□□□□ -1.3
CIITA-201ENST00000324288 OR2A4O95047 310 aa6.9□□□□□ -1.3
CIITA-201ENST00000324288 HSPB1P04792 205 aaKnown RBP6.9□□□□□ -1.3
CIITA-201ENST00000324288 MAGEA5P43359 124 aa6.9□□□□□ -1.3
CIITA-201ENST00000324288 TMEM177Q53S58 311 aa6.9□□□□□ -1.3
CIITA-201ENST00000324288 ZNF660Q6AZW8 331 aaPredicted RBP6.9□□□□□ -1.3
CIITA-201ENST00000324288 OR2A7Q96R45 310 aa6.9□□□□□ -1.3
CIITA-201ENST00000324288 MIEN1Q9BRT3 115 aa6.9□□□□□ -1.3
CIITA-201ENST00000324288 ELF5Q9UKW6 265 aaPredicted RBP6.9□□□□□ -1.3
CIITA-201ENST00000324288 KLF4O43474 513 aa6.9□□□□□ -1.3
CIITA-201ENST00000324288 TRAV38-1A0A0B4J264 116 aa6.9□□□□□ -1.3
CIITA-201ENST00000324288 CLDN18P56856 261 aa6.9□□□□□ -1.3
CIITA-201ENST00000324288 SPTY2D1-AS1A0A0U1RR47 76 aa6.9□□□□□ -1.3
CIITA-201ENST00000324288 CTSSP25774 331 aa6.9□□□□□ -1.3
CIITA-201ENST00000324288 HYAL1Q12794 435 aa6.9□□□□□ -1.3
CIITA-201ENST00000324288 SPEM1Q8N4L4 309 aa6.9□□□□□ -1.3
CIITA-201ENST00000324288 ASB10Q8WXI3 467 aa6.9□□□□□ -1.3
CIITA-201ENST00000324288 THYN1Q9P016 225 aa6.9□□□□□ -1.3
CIITA-201ENST00000324288 HRKO00198 91 aa6.9□□□□□ -1.3
CIITA-201ENST00000324288 SLC25A30Q5SVS4 291 aa6.9□□□□□ -1.3
CIITA-201ENST00000324288 CHODLQ9H9P2 273 aa6.9□□□□□ -1.3
CIITA-201ENST00000324288 A0A1B0GWB2 263 aa6.9□□□□□ -1.3
CIITA-201ENST00000324288 RAG2P55895 527 aa6.9□□□□□ -1.3
CIITA-201ENST00000324288 NUDT10Q8NFP7 164 aa6.9□□□□□ -1.3
CIITA-201ENST00000324288 NUDT11Q96G61 164 aa6.9□□□□□ -1.3
CIITA-201ENST00000324288 HARBI1Q96MB7 349 aa6.9□□□□□ -1.31
CIITA-201ENST00000324288 SH3BGRL3Q9H299 93 aa6.9□□□□□ -1.31
CIITA-201ENST00000324288 SCN7AQ01118 1682 aa6.9□□□□□ -1.31
CIITA-201ENST00000324288 FAM181BA6NEQ2 426 aa6.9□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms