RNA–Protein interactions for RNA: ENST00000320876.10

SMCHD1-201, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCHD1, Length 8,821 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-201ENST00000320876 ATG4DQ86TL0 474 aaPredicted RBP14.74□□□□□ -0.05
SMCHD1-201ENST00000320876 TMSB15BA0A087X1C1 80 aa14.74□□□□□ -0.05
SMCHD1-201ENST00000320876 THADAQ6YHU6 1953 aa14.74□□□□□ -0.05
SMCHD1-201ENST00000320876 GALNSP34059 522 aa14.74□□□□□ -0.05
SMCHD1-201ENST00000320876 RRN3P1Q2M238 152 aa14.74□□□□□ -0.05
SMCHD1-201ENST00000320876 ZNF665Q9H7R5 613 aa14.74□□□□□ -0.05
SMCHD1-201ENST00000320876 TRAV8-7A0A075B6U6 113 aa14.74□□□□□ -0.05
SMCHD1-201ENST00000320876 IGHV5-51A0A0C4DH38 117 aa14.74□□□□□ -0.05
SMCHD1-201ENST00000320876 FCARP24071 287 aa14.74□□□□□ -0.05
SMCHD1-201ENST00000320876 C1orf174Q8IYL3 243 aa14.74□□□□□ -0.05
SMCHD1-201ENST00000320876 VSTM2LQ96N03 204 aa14.74□□□□□ -0.05
SMCHD1-201ENST00000320876 CEACAM18A8MTB9 384 aa14.73□□□□□ -0.05
SMCHD1-201ENST00000320876 CXCL2P19875 107 aa14.73□□□□□ -0.05
SMCHD1-201ENST00000320876 ROM1Q03395 351 aa14.73□□□□□ -0.05
SMCHD1-201ENST00000320876 OR4A5Q8NH83 315 aa14.73□□□□□ -0.05
SMCHD1-201ENST00000320876 MBD3L1Q8WWY6 194 aa14.73□□□□□ -0.05
SMCHD1-201ENST00000320876 MRPL16Q9NX20 251 aaKnown RBP14.73□□□□□ -0.05
SMCHD1-201ENST00000320876 RABAC1Q9UI14 185 aa14.73□□□□□ -0.05
SMCHD1-201ENST00000320876 LRP5O75197 1615 aa14.73□□□□□ -0.05
SMCHD1-201ENST00000320876 CDIPTO14735 213 aa14.73□□□□□ -0.05
SMCHD1-201ENST00000320876 LINC01555Q8NAE3 123 aa14.73□□□□□ -0.05
SMCHD1-201ENST00000320876 CISD1Q9NZ45 108 aaKnown RBP14.73□□□□□ -0.05
SMCHD1-201ENST00000320876 KCNMB1Q16558 191 aa14.73□□□□□ -0.05
SMCHD1-201ENST00000320876 GGACTQ9BVM4 153 aa14.73□□□□□ -0.05
SMCHD1-201ENST00000320876 APELAP0DMC3 54 aa14.73□□□□□ -0.05
SMCHD1-201ENST00000320876 TMIGD3P0DMS9 266 aaPredicted RBP14.73□□□□□ -0.05
SMCHD1-201ENST00000320876 CDX1P47902 265 aaPredicted RBP14.73□□□□□ -0.05
SMCHD1-201ENST00000320876 OR10AC1Q8NH08 325 aa14.73□□□□□ -0.05
SMCHD1-201ENST00000320876 PTPMT1Q8WUK0 201 aaPredicted RBP14.73□□□□□ -0.05
SMCHD1-201ENST00000320876 TM4SF20Q53R12 229 aa14.72□□□□□ -0.05
SMCHD1-201ENST00000320876 TCF24Q7RTU0 167 aa14.72□□□□□ -0.05
SMCHD1-201ENST00000320876 ZNF645Q8N7E2 425 aa14.72□□□□□ -0.05
SMCHD1-201ENST00000320876 GGTLC2Q14390 218 aa14.72□□□□□ -0.05
SMCHD1-201ENST00000320876 SOSTQ9BQB4 213 aa14.72□□□□□ -0.05
SMCHD1-201ENST00000320876 TMEM222Q9H0R3 208 aa14.72□□□□□ -0.05
SMCHD1-201ENST00000320876 TUBD1Q9UJT1 453 aa14.72□□□□□ -0.05
SMCHD1-201ENST00000320876 OR10S1Q8NGN2 331 aa14.72□□□□□ -0.05
SMCHD1-201ENST00000320876 SELENOTP62341 195 aa14.72□□□□□ -0.05
SMCHD1-201ENST00000320876 ARL6IP6Q8N6S5 226 aa14.72□□□□□ -0.05
SMCHD1-201ENST00000320876 QTRT1Q9BXR0 403 aaKnown RBP14.72□□□□□ -0.05
SMCHD1-201ENST00000320876 TGIF2-C20orf24A0A0A6YYL0 155 aa14.72□□□□□ -0.05
SMCHD1-201ENST00000320876 CD3EP07766 207 aa14.72□□□□□ -0.05
SMCHD1-201ENST00000320876 NMBP08949 121 aa14.72□□□□□ -0.05
SMCHD1-201ENST00000320876 AGAP20933 346 aa14.72□□□□□ -0.05
SMCHD1-201ENST00000320876 RBM11P57052 281 aaKnown RBP14.72□□□□□ -0.05
SMCHD1-201ENST00000320876 ECSCRQ19T08 205 aa14.72□□□□□ -0.05
SMCHD1-201ENST00000320876 AUP1Q9Y679 476 aa14.72□□□□□ -0.05
SMCHD1-201ENST00000320876 DLX6P56179 175 aa14.71□□□□□ -0.05
SMCHD1-201ENST00000320876 ZNF506Q5JVG8 444 aa14.71□□□□□ -0.05
SMCHD1-201ENST00000320876 HMGCLL1Q8TB92 370 aa14.71□□□□□ -0.05
SMCHD1-201ENST00000320876 SCNM1Q9BWG6 230 aa14.71□□□□□ -0.05
SMCHD1-201ENST00000320876 WNT16Q9UBV4 365 aa14.71□□□□□ -0.05
SMCHD1-201ENST00000320876 FAM169BQ8N8A8 192 aa14.71□□□□□ -0.05
SMCHD1-201ENST00000320876 NYNRINQ9P2P1 1898 aaKnown RBP14.71□□□□□ -0.05
SMCHD1-201ENST00000320876 GALNT14Q96FL9 552 aa14.71□□□□□ -0.05
SMCHD1-201ENST00000320876 KLK2P20151 261 aa14.71□□□□□ -0.05
SMCHD1-201ENST00000320876 TMEM177Q53S58 311 aa14.71□□□□□ -0.05
SMCHD1-201ENST00000320876 MOGAT3Q86VF5 341 aa14.71□□□□□ -0.05
SMCHD1-201ENST00000320876 AHDC1Q5TGY3 1603 aaPredicted RBP14.71□□□□□ -0.05
SMCHD1-201ENST00000320876 NOTCH3Q9UM47 2321 aa14.71□□□□□ -0.05
SMCHD1-201ENST00000320876 PRSS41Q7RTY9 318 aa14.71□□□□□ -0.05
SMCHD1-201ENST00000320876 C16orf92Q96LL3 132 aa14.71□□□□□ -0.05
SMCHD1-201ENST00000320876 ARRDC1-AS1Q9H2J1 176 aa14.71□□□□□ -0.05
SMCHD1-201ENST00000320876 F11RQ9Y624 299 aaKnown RBP14.71□□□□□ -0.05
SMCHD1-201ENST00000320876 A0A0U1RQV5 110 aa14.71□□□□□ -0.05
SMCHD1-201ENST00000320876 SLC25A17O43808 307 aa14.71□□□□□ -0.05
SMCHD1-201ENST00000320876 S1PR2O95136 353 aa14.71□□□□□ -0.05
SMCHD1-201ENST00000320876 RAB9AP51151 201 aa14.71□□□□□ -0.05
SMCHD1-201ENST00000320876 NUP37Q8NFH4 326 aa14.71□□□□□ -0.05
SMCHD1-201ENST00000320876 PEX11BO96011 259 aa14.71□□□□□ -0.06
SMCHD1-201ENST00000320876 ARL14EPLP0DKL9 152 aa14.71□□□□□ -0.06
SMCHD1-201ENST00000320876 CBLN3Q6UW01 205 aa14.71□□□□□ -0.06
SMCHD1-201ENST00000320876 LINC00518Q8N0U6 118 aa14.71□□□□□ -0.06
SMCHD1-201ENST00000320876 KLK10O43240 276 aa14.7□□□□□ -0.06
SMCHD1-201ENST00000320876 KCNE5Q9UJ90 142 aa14.7□□□□□ -0.06
SMCHD1-201ENST00000320876 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.7□□□□□ -0.06
SMCHD1-201ENST00000320876 WNT5BQ9H1J7 359 aa14.7□□□□□ -0.06
SMCHD1-201ENST00000320876 RNF7Q9UBF6 113 aa14.7□□□□□ -0.06
SMCHD1-201ENST00000320876 CD1AP06126 327 aa14.7□□□□□ -0.06
SMCHD1-201ENST00000320876 SPNS2Q8IVW8 549 aa14.7□□□□□ -0.06
SMCHD1-201ENST00000320876 KCNK7Q9Y2U2 307 aa14.7□□□□□ -0.06
SMCHD1-201ENST00000320876 PSG9Q00887 426 aa14.7□□□□□ -0.06
SMCHD1-201ENST00000320876 EBLN2Q6P2I7 272 aa14.7□□□□□ -0.06
SMCHD1-201ENST00000320876 STPG3Q8N7X2 389 aa14.7□□□□□ -0.06
SMCHD1-201ENST00000320876 SLC25A10Q9UBX3 287 aaPredicted RBP14.7□□□□□ -0.06
SMCHD1-201ENST00000320876 PNLIPP16233 465 aa14.7□□□□□ -0.06
SMCHD1-201ENST00000320876 CBLN4Q9NTU7 201 aa14.7□□□□□ -0.06
SMCHD1-201ENST00000320876 IGKV3-7A0A075B6H7 116 aa14.7□□□□□ -0.06
SMCHD1-201ENST00000320876 VSIG8P0DPA2 414 aa14.7□□□□□ -0.06
SMCHD1-201ENST00000320876 GLIPR1P48060 266 aa14.7□□□□□ -0.06
SMCHD1-201ENST00000320876 SPINK14Q6IE38 97 aa14.7□□□□□ -0.06
SMCHD1-201ENST00000320876 PGLYRP4Q96LB8 373 aa14.7□□□□□ -0.06
SMCHD1-201ENST00000320876 FAM90A27PA6NNH2 459 aa14.69□□□□□ -0.06
SMCHD1-201ENST00000320876 C2orf83Q53S99 150 aa14.69□□□□□ -0.06
SMCHD1-201ENST00000320876 FAM216AQ8WUB2 273 aa14.69□□□□□ -0.06
SMCHD1-201ENST00000320876 SFRP2Q96HF1 295 aa14.69□□□□□ -0.06
SMCHD1-201ENST00000320876 RARRES2Q99969 163 aa14.69□□□□□ -0.06
SMCHD1-201ENST00000320876 J3QT63 122 aa14.69□□□□□ -0.06
SMCHD1-201ENST00000320876 HEXA-AS1Q9H8Q6 139 aa14.69□□□□□ -0.06
SMCHD1-201ENST00000320876 TMEM196Q5HYL7 178 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms