RNA–Protein interactions for RNA: ENST00000317201.6

HOXA3-201, Transcript of homeobox A3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HOXA3, Length 2,761 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-201ENST00000317201 AQP3Q92482 292 aa12.54□□□□□ -0.4
HOXA3-201ENST00000317201 CYYR1Q96J86 154 aa12.54□□□□□ -0.4
HOXA3-201ENST00000317201 LYZL4Q96KX0 146 aa12.54□□□□□ -0.4
HOXA3-201ENST00000317201 A0A1B0GU03 582 aa12.54□□□□□ -0.4
HOXA3-201ENST00000317201 GAPDHP04406 335 aaKnown RBP12.54□□□□□ -0.4
HOXA3-201ENST00000317201 CTSDP07339 412 aaPredicted RBP12.54□□□□□ -0.4
HOXA3-201ENST00000317201 TLE1Q04724 770 aa12.54□□□□□ -0.4
HOXA3-201ENST00000317201 PRR27Q6MZM9 219 aa12.54□□□□□ -0.4
HOXA3-201ENST00000317201 RBMXL3Q8N7X1 1067 aaKnown RBP12.54□□□□□ -0.4
HOXA3-201ENST00000317201 ZDHHC22Q8N966 263 aa12.54□□□□□ -0.4
HOXA3-201ENST00000317201 PP6455Q8WZ26 134 aa12.54□□□□□ -0.4
HOXA3-201ENST00000317201 REEP6Q96HR9 211 aa12.54□□□□□ -0.4
HOXA3-201ENST00000317201 FBLN5Q9UBX5 448 aa12.54□□□□□ -0.4
HOXA3-201ENST00000317201 IGHV2OR16-5A0A0B4J2B6 119 aa12.53□□□□□ -0.4
HOXA3-201ENST00000317201 GLYATL3Q5SZD4 288 aa12.53□□□□□ -0.4
HOXA3-201ENST00000317201 COMMD2Q86X83 199 aa12.53□□□□□ -0.4
HOXA3-201ENST00000317201 OR4D5Q8NGN0 318 aa12.53□□□□□ -0.4
HOXA3-201ENST00000317201 TMEM230Q96A57 120 aa12.53□□□□□ -0.4
HOXA3-201ENST00000317201 HSPB7Q9UBY9 170 aa12.53□□□□□ -0.4
HOXA3-201ENST00000317201 ODAMA1E959 279 aa12.53□□□□□ -0.4
HOXA3-201ENST00000317201 IGHV3-9P01782 118 aa12.53□□□□□ -0.4
HOXA3-201ENST00000317201 SEC11BP0C7V7 166 aa12.53□□□□□ -0.4
HOXA3-201ENST00000317201 RND2P52198 227 aa12.53□□□□□ -0.4
HOXA3-201ENST00000317201 SPOCK1Q08629 439 aa12.53□□□□□ -0.4
HOXA3-201ENST00000317201 SMIM21Q3B7S5 101 aa12.53□□□□□ -0.4
HOXA3-201ENST00000317201 FGFBP3Q8TAT2 258 aa12.53□□□□□ -0.4
HOXA3-201ENST00000317201 MOB3AQ96BX8 217 aa12.53□□□□□ -0.4
HOXA3-201ENST00000317201 SMIM12Q96EX1 92 aa12.53□□□□□ -0.4
HOXA3-201ENST00000317201 RAB18Q9NP72 206 aa12.53□□□□□ -0.4
HOXA3-201ENST00000317201 TRAV39A0A0B4J263 110 aa12.52□□□□□ -0.4
HOXA3-201ENST00000317201 SERTM2A0A1B0GWG4 89 aa12.52□□□□□ -0.4
HOXA3-201ENST00000317201 E9PLN8 166 aa12.52□□□□□ -0.4
HOXA3-201ENST00000317201 K7ENP7 123 aa12.52□□□□□ -0.4
HOXA3-201ENST00000317201 DBHP09172 617 aa12.52□□□□□ -0.4
HOXA3-201ENST00000317201 SPINK2P20155 84 aa12.52□□□□□ -0.4
HOXA3-201ENST00000317201 RPL23AP62750 156 aaKnown RBP12.52□□□□□ -0.4
HOXA3-201ENST00000317201 IL24Q13007 206 aa12.52□□□□□ -0.4
HOXA3-201ENST00000317201 TAF9Q16594 264 aa12.52□□□□□ -0.4
HOXA3-201ENST00000317201 TMEM241Q24JQ0 296 aa12.52□□□□□ -0.4
HOXA3-201ENST00000317201 INO80CQ6PI98 192 aaPredicted RBP12.52□□□□□ -0.4
HOXA3-201ENST00000317201 PRSS57Q6UWY2 283 aa12.52□□□□□ -0.4
HOXA3-201ENST00000317201 Q6ZWC4 215 aa12.52□□□□□ -0.4
HOXA3-201ENST00000317201 FAM214BQ7L5A3 538 aa12.52□□□□□ -0.4
HOXA3-201ENST00000317201 ACY3Q96HD9 319 aa12.52□□□□□ -0.4
HOXA3-201ENST00000317201 FAM71F1Q96KD3 344 aaPredicted RBP12.52□□□□□ -0.4
HOXA3-201ENST00000317201 C1QTNF5Q9BXJ0 243 aa12.52□□□□□ -0.4
HOXA3-201ENST00000317201 HIPK2Q9H2X6 1198 aa12.52□□□□□ -0.4
HOXA3-201ENST00000317201 C5orf66Q9H5L9 145 aa12.52□□□□□ -0.4
HOXA3-201ENST00000317201 PDLIM4P50479 330 aa12.52□□□□□ -0.41
HOXA3-201ENST00000317201 HNRNPA3P51991 378 aaKnown RBP12.52□□□□□ -0.41
HOXA3-201ENST00000317201 ZNF92Q03936 586 aa12.52□□□□□ -0.41
HOXA3-201ENST00000317201 TMEM128Q5BJH2 165 aa12.52□□□□□ -0.41
HOXA3-201ENST00000317201 SPSB3Q6PJ21 355 aa12.52□□□□□ -0.41
HOXA3-201ENST00000317201 COLCA1Q6ZS62 124 aa12.52□□□□□ -0.41
HOXA3-201ENST00000317201 H1FOOQ8IZA3 346 aaPredicted RBP12.52□□□□□ -0.41
HOXA3-201ENST00000317201 OR1K1Q8NGR3 316 aa12.52□□□□□ -0.41
HOXA3-201ENST00000317201 SSC4DQ8WTU2 575 aa12.52□□□□□ -0.41
HOXA3-201ENST00000317201 NICN1Q9BSH3 213 aa12.52□□□□□ -0.41
HOXA3-201ENST00000317201 ST3GAL6Q9Y274 331 aa12.52□□□□□ -0.41
HOXA3-201ENST00000317201 ZNF407Q9C0G0 2248 aa12.52□□□□□ -0.41
HOXA3-201ENST00000317201 BORCS7-ASMTA0A0B4J1R7 106 aa12.52□□□□□ -0.41
HOXA3-201ENST00000317201 GPR137BO60478 399 aa12.52□□□□□ -0.41
HOXA3-201ENST00000317201 CHRM2P08172 466 aa12.52□□□□□ -0.41
HOXA3-201ENST00000317201 ANOS1P23352 680 aa12.52□□□□□ -0.41
HOXA3-201ENST00000317201 SSBP1Q04837 148 aaKnown RBP12.52□□□□□ -0.41
HOXA3-201ENST00000317201 OR5AS1Q8N127 324 aa12.52□□□□□ -0.41
HOXA3-201ENST00000317201 LFNGQ8NES3 379 aa12.52□□□□□ -0.41
HOXA3-201ENST00000317201 FAM46BQ96A09 425 aa12.52□□□□□ -0.41
HOXA3-201ENST00000317201 ZC2HC1AQ96GY0 325 aa12.52□□□□□ -0.41
HOXA3-201ENST00000317201 TRIB1Q96RU8 372 aa12.52□□□□□ -0.41
HOXA3-201ENST00000317201 MEMO1Q9Y316 297 aa12.52□□□□□ -0.41
HOXA3-201ENST00000317201 SFT2D2O95562 160 aa12.51□□□□□ -0.41
HOXA3-201ENST00000317201 PTGER4P35408 488 aa12.51□□□□□ -0.41
HOXA3-201ENST00000317201 SUPT4H1P63272 117 aaKnown RBP12.51□□□□□ -0.41
HOXA3-201ENST00000317201 SNAI3Q3KNW1 292 aa12.51□□□□□ -0.41
HOXA3-201ENST00000317201 ACSF3Q4G176 576 aaPredicted RBP12.51□□□□□ -0.41
HOXA3-201ENST00000317201 KRTCAP3Q53RY4 240 aa12.51□□□□□ -0.41
HOXA3-201ENST00000317201 STXBP6Q8NFX7 210 aa12.51□□□□□ -0.41
HOXA3-201ENST00000317201 NANOS1Q8WY41 292 aaKnown RBP12.51□□□□□ -0.41
HOXA3-201ENST00000317201 SPSB4Q96A44 273 aa12.51□□□□□ -0.41
HOXA3-201ENST00000317201 PRSS50Q9UI38 385 aa12.51□□□□□ -0.41
HOXA3-201ENST00000317201 RAB29O14966 203 aa12.51□□□□□ -0.41
HOXA3-201ENST00000317201 MMP23AO75900 390 aa12.51□□□□□ -0.41
HOXA3-201ENST00000317201 PATE4P0C8F1 98 aa12.51□□□□□ -0.41
HOXA3-201ENST00000317201 TEX43Q6ZNM6 134 aa12.51□□□□□ -0.41
HOXA3-201ENST00000317201 TMEM170AQ8WVE7 144 aa12.51□□□□□ -0.41
HOXA3-201ENST00000317201 CLN8Q9UBY8 286 aa12.51□□□□□ -0.41
HOXA3-201ENST00000317201 K7N7A8 449 aa12.5□□□□□ -0.41
HOXA3-201ENST00000317201 KNG1P01042 644 aa12.5□□□□□ -0.41
HOXA3-201ENST00000317201 GLRA1P23415 457 aa12.5□□□□□ -0.41
HOXA3-201ENST00000317201 ZNF93P35789 620 aaPredicted RBP12.5□□□□□ -0.41
HOXA3-201ENST00000317201 PRRX1P54821 245 aa12.5□□□□□ -0.41
HOXA3-201ENST00000317201 UCNP55089 124 aa12.5□□□□□ -0.41
HOXA3-201ENST00000317201 NUDT16L1Q9BRJ7 211 aaKnown RBP12.5□□□□□ -0.41
HOXA3-201ENST00000317201 TMEM106BQ9NUM4 274 aa12.5□□□□□ -0.41
HOXA3-201ENST00000317201 AK3Q9UIJ7 227 aa12.5□□□□□ -0.41
HOXA3-201ENST00000317201 STRAPQ9Y3F4 350 aaKnown RBP12.5□□□□□ -0.41
HOXA3-201ENST00000317201 CUL9Q8IWT3 2517 aa12.5□□□□□ -0.41
HOXA3-201ENST00000317201 C5orf63A6NC05 138 aa12.5□□□□□ -0.41
HOXA3-201ENST00000317201 TGFBR3Q03167 851 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms