RNA–Protein interactions for RNA: ENST00000316707.10

PTPN13-201, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 7,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-201ENST00000316707 J3QT63 122 aa4.06□□□□□ -1.76
PTPN13-201ENST00000316707 FCN1O00602 326 aa4.06□□□□□ -1.76
PTPN13-201ENST00000316707 IGKV1-5P01602 117 aa4.06□□□□□ -1.76
PTPN13-201ENST00000316707 B4GALT1P15291 398 aa4.06□□□□□ -1.76
PTPN13-201ENST00000316707 EN2P19622 333 aaPredicted RBP4.06□□□□□ -1.76
PTPN13-201ENST00000316707 GNB2P62879 340 aa4.06□□□□□ -1.76
PTPN13-201ENST00000316707 GNG3P63215 75 aa4.06□□□□□ -1.76
PTPN13-201ENST00000316707 CEACAM16Q2WEN9 425 aa4.06□□□□□ -1.76
PTPN13-201ENST00000316707 DEFB133Q30KQ1 61 aa4.06□□□□□ -1.76
PTPN13-201ENST00000316707 TIGITQ495A1 244 aa4.06□□□□□ -1.76
PTPN13-201ENST00000316707 TPTE2P1Q5T6R2 138 aa4.06□□□□□ -1.76
PTPN13-201ENST00000316707 C17orf78Q8N4C9 275 aa4.06□□□□□ -1.76
PTPN13-201ENST00000316707 FAM216AQ8WUB2 273 aa4.06□□□□□ -1.76
PTPN13-201ENST00000316707 HSPB9Q9BQS6 159 aa4.06□□□□□ -1.76
PTPN13-201ENST00000316707 QTRT1Q9BXR0 403 aaKnown RBP4.06□□□□□ -1.76
PTPN13-201ENST00000316707 WNT5BQ9H1J7 359 aa4.06□□□□□ -1.76
PTPN13-201ENST00000316707 IGFLR1Q9H665 355 aa4.06□□□□□ -1.76
PTPN13-201ENST00000316707 MRPS16Q9Y3D3 137 aaKnown RBP4.06□□□□□ -1.76
PTPN13-201ENST00000316707 COL4A2P08572 1712 aa4.06□□□□□ -1.76
PTPN13-201ENST00000316707 RBMXL2O75526 392 aaKnown RBP4.06□□□□□ -1.76
PTPN13-201ENST00000316707 RAB7AP51149 207 aa4.06□□□□□ -1.76
PTPN13-201ENST00000316707 C16orf47Q6ZP98 133 aaPredicted RBP4.06□□□□□ -1.76
PTPN13-201ENST00000316707 Q6ZRM9 215 aa4.06□□□□□ -1.76
PTPN13-201ENST00000316707 FGFRL1Q8N441 504 aa4.06□□□□□ -1.76
PTPN13-201ENST00000316707 GSX1Q9H4S2 264 aaPredicted RBP4.06□□□□□ -1.76
PTPN13-201ENST00000316707 WDR54Q9H977 334 aa4.06□□□□□ -1.76
PTPN13-201ENST00000316707 BET1LQ9NYM9 111 aa4.06□□□□□ -1.76
PTPN13-201ENST00000316707 LIFP15018 202 aa4.06□□□□□ -1.76
PTPN13-201ENST00000316707 AMTP48728 403 aa4.06□□□□□ -1.76
PTPN13-201ENST00000316707 TRIM61Q5EBN2 209 aa4.06□□□□□ -1.76
PTPN13-201ENST00000316707 FBXW9Q5XUX1 488 aa4.06□□□□□ -1.76
PTPN13-201ENST00000316707 CYB5R2Q6BCY4 276 aa4.06□□□□□ -1.76
PTPN13-201ENST00000316707 HAPLN4Q86UW8 402 aa4.06□□□□□ -1.76
PTPN13-201ENST00000316707 RDH5Q92781 318 aa4.06□□□□□ -1.76
PTPN13-201ENST00000316707 SFXN3Q9BWM7 321 aa4.06□□□□□ -1.76
PTPN13-201ENST00000316707 NPCDR1Q9BY65 106 aa4.06□□□□□ -1.76
PTPN13-201ENST00000316707 LAMTOR2Q9Y2Q5 125 aa4.06□□□□□ -1.76
PTPN13-201ENST00000316707 CHCHD2Q9Y6H1 151 aaPredicted RBP4.06□□□□□ -1.76
PTPN13-201ENST00000316707 SPTBP11277 2137 aa4.06□□□□□ -1.76
PTPN13-201ENST00000316707 MYOFQ9NZM1 2061 aa4.06□□□□□ -1.76
PTPN13-201ENST00000316707 IGKV1-6A0A0C4DH72 117 aa4.06□□□□□ -1.76
PTPN13-201ENST00000316707 A0A0J9YW62 118 aa4.06□□□□□ -1.76
PTPN13-201ENST00000316707 RAB29O14966 203 aa4.06□□□□□ -1.76
PTPN13-201ENST00000316707 BMP5P22003 454 aa4.06□□□□□ -1.76
PTPN13-201ENST00000316707 PTTG1IPP53801 180 aa4.06□□□□□ -1.76
PTPN13-201ENST00000316707 ARL16Q0P5N6 197 aa4.06□□□□□ -1.76
PTPN13-201ENST00000316707 VWC2Q2TAL6 325 aa4.06□□□□□ -1.76
PTPN13-201ENST00000316707 C1orf174Q8IYL3 243 aa4.06□□□□□ -1.76
PTPN13-201ENST00000316707 ZNF295-AS1Q8N0V1 137 aa4.06□□□□□ -1.76
PTPN13-201ENST00000316707 STARD4Q96DR4 205 aa4.06□□□□□ -1.76
PTPN13-201ENST00000316707 SFRP2Q96HF1 295 aa4.06□□□□□ -1.76
PTPN13-201ENST00000316707 THOC3Q96J01 351 aaKnown RBP4.06□□□□□ -1.76
PTPN13-201ENST00000316707 CCDC74BQ96LY2 380 aa4.06□□□□□ -1.76
PTPN13-201ENST00000316707 DIRC3C9JPN6 131 aa4.06□□□□□ -1.76
PTPN13-201ENST00000316707 LILRA1O75019 489 aa4.06□□□□□ -1.76
PTPN13-201ENST00000316707 SCRG1O75711 98 aa4.06□□□□□ -1.76
PTPN13-201ENST00000316707 NXPH2O95156 264 aa4.06□□□□□ -1.76
PTPN13-201ENST00000316707 RAC2P15153 192 aa4.06□□□□□ -1.76
PTPN13-201ENST00000316707 CARD18P57730 90 aa4.06□□□□□ -1.76
PTPN13-201ENST00000316707 UBE2G2P60604 165 aa4.06□□□□□ -1.76
PTPN13-201ENST00000316707 PMP22Q01453 160 aa4.06□□□□□ -1.76
PTPN13-201ENST00000316707 BATFQ16520 125 aa4.06□□□□□ -1.76
PTPN13-201ENST00000316707 PRAMEF20Q5VT98 475 aa4.06□□□□□ -1.76
PTPN13-201ENST00000316707 ACSM6Q6P461 480 aa4.06□□□□□ -1.76
PTPN13-201ENST00000316707 TMEM256Q8N2U0 113 aa4.06□□□□□ -1.76
PTPN13-201ENST00000316707 CORO2AQ92828 525 aa4.06□□□□□ -1.76
PTPN13-201ENST00000316707 TMEM45BQ96B21 275 aa4.06□□□□□ -1.76
PTPN13-201ENST00000316707 AP1S3Q96PC3 154 aa4.06□□□□□ -1.76
PTPN13-201ENST00000316707 IL36BQ9NZH7 164 aa4.06□□□□□ -1.76
PTPN13-201ENST00000316707 KCNS2Q9ULS6 477 aa4.06□□□□□ -1.76
PTPN13-201ENST00000316707 SHANK1Q9Y566 2161 aa4.06□□□□□ -1.76
PTPN13-201ENST00000316707 LRRC30A6NM36 301 aa4.05□□□□□ -1.76
PTPN13-201ENST00000316707 IGKV1D-33P01593 117 aa4.05□□□□□ -1.76
PTPN13-201ENST00000316707 IGKV1-33P01594 117 aa4.05□□□□□ -1.76
PTPN13-201ENST00000316707 GPX1P07203 203 aa4.05□□□□□ -1.76
PTPN13-201ENST00000316707 STAG3L2P0CL84 134 aa4.05□□□□□ -1.76
PTPN13-201ENST00000316707 STAG3L3P0CL85 134 aa4.05□□□□□ -1.76
PTPN13-201ENST00000316707 ZNF16P17020 682 aaPredicted RBP4.05□□□□□ -1.76
PTPN13-201ENST00000316707 CD1BP29016 333 aa4.05□□□□□ -1.76
PTPN13-201ENST00000316707 CHRNB4P30926 498 aa4.05□□□□□ -1.76
PTPN13-201ENST00000316707 SSR4P51571 173 aa4.05□□□□□ -1.76
PTPN13-201ENST00000316707 SMIM15Q7Z3B0 74 aa4.05□□□□□ -1.76
PTPN13-201ENST00000316707 MTURNQ8N3F0 131 aa4.05□□□□□ -1.76
PTPN13-201ENST00000316707 PRR18Q8N4B5 295 aa4.05□□□□□ -1.76
PTPN13-201ENST00000316707 IL1F10Q8WWZ1 152 aa4.05□□□□□ -1.76
PTPN13-201ENST00000316707 C11orf52Q96A22 123 aa4.05□□□□□ -1.76
PTPN13-201ENST00000316707 CYYR1Q96J86 154 aa4.05□□□□□ -1.76
PTPN13-201ENST00000316707 A0A0G2JRQ6 117 aa4.05□□□□□ -1.76
PTPN13-201ENST00000316707 FAM90A9PA6NNJ1 464 aa4.05□□□□□ -1.76
PTPN13-201ENST00000316707 CXorf1O96002 111 aa4.05□□□□□ -1.76
PTPN13-201ENST00000316707 CLEC12BQ2HXU8 276 aa4.05□□□□□ -1.76
PTPN13-201ENST00000316707 HLA-DRB5Q30154 266 aa4.05□□□□□ -1.76
PTPN13-201ENST00000316707 SHISA6Q6ZSJ9 500 aa4.05□□□□□ -1.76
PTPN13-201ENST00000316707 DPF1Q92782 380 aa4.05□□□□□ -1.76
PTPN13-201ENST00000316707 GNB1LQ9BYB4 327 aa4.05□□□□□ -1.76
PTPN13-201ENST00000316707 MTCL1Q9Y4B5 1905 aaKnown RBP4.05□□□□□ -1.76
PTPN13-201ENST00000316707 G3V3Y1 287 aa4.05□□□□□ -1.76
PTPN13-201ENST00000316707 YPEL1O60688 119 aa4.05□□□□□ -1.76
PTPN13-201ENST00000316707 SERF1AO75920 110 aa4.05□□□□□ -1.76
PTPN13-201ENST00000316707 NDUFB4O95168 129 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms