RNA–Protein interactions for RNA: ENST00000306149.11

CSDC2-201, Transcript of cold shock domain containing C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDC2, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDC2-201ENST00000306149 HIST1H2BOP23527 126 aa12.76□□□□□ -0.37
CSDC2-201ENST00000306149 S100A2P29034 98 aa12.76□□□□□ -0.37
CSDC2-201ENST00000306149 HIST1H2BBP33778 126 aa12.76□□□□□ -0.37
CSDC2-201ENST00000306149 HIST1H2BDP58876 126 aa12.76□□□□□ -0.37
CSDC2-201ENST00000306149 PPP1CBP62140 327 aa12.76□□□□□ -0.37
CSDC2-201ENST00000306149 RAB11AP62491 216 aa12.76□□□□□ -0.37
CSDC2-201ENST00000306149 HIST1H2BCP62807 126 aa12.76□□□□□ -0.37
CSDC2-201ENST00000306149 ZNF726P1Q15940 193 aa12.76□□□□□ -0.37
CSDC2-201ENST00000306149 HIST2H2BEQ16778 126 aa12.76□□□□□ -0.37
CSDC2-201ENST00000306149 TBC1D28Q2M2D7 210 aa12.76□□□□□ -0.37
CSDC2-201ENST00000306149 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.76□□□□□ -0.37
CSDC2-201ENST00000306149 ZNF826PQ6ZT77 177 aa12.76□□□□□ -0.37
CSDC2-201ENST00000306149 DRAM1Q8N682 238 aa12.76□□□□□ -0.37
CSDC2-201ENST00000306149 SCGB1C1Q8TD33 95 aa12.76□□□□□ -0.37
CSDC2-201ENST00000306149 HIST1H2BHQ93079 126 aa12.76□□□□□ -0.37
CSDC2-201ENST00000306149 HIST1H2BNQ99877 126 aa12.76□□□□□ -0.37
CSDC2-201ENST00000306149 HIST1H2BMQ99879 126 aa12.76□□□□□ -0.37
CSDC2-201ENST00000306149 GAR1Q9NY12 217 aaKnown RBP12.76□□□□□ -0.37
CSDC2-201ENST00000306149 WNT9BO14905 357 aa12.76□□□□□ -0.37
CSDC2-201ENST00000306149 CD200P41217 278 aa12.76□□□□□ -0.37
CSDC2-201ENST00000306149 RPS16P62249 146 aaKnown RBP12.76□□□□□ -0.37
CSDC2-201ENST00000306149 ACSF3Q4G176 576 aaPredicted RBP12.76□□□□□ -0.37
CSDC2-201ENST00000306149 SLC25A40Q8TBP6 338 aa12.76□□□□□ -0.37
CSDC2-201ENST00000306149 TMEM242Q9NWH2 141 aa12.76□□□□□ -0.37
CSDC2-201ENST00000306149 TRGV5A0A0B4J1U4 118 aa12.75□□□□□ -0.37
CSDC2-201ENST00000306149 SEC14L6B5MCN3 397 aa12.75□□□□□ -0.37
CSDC2-201ENST00000306149 CYB5BO43169 146 aa12.75□□□□□ -0.37
CSDC2-201ENST00000306149 PSPNO60542 156 aa12.75□□□□□ -0.37
CSDC2-201ENST00000306149 SMPD2O60906 423 aa12.75□□□□□ -0.37
CSDC2-201ENST00000306149 ELLP55199 621 aaPredicted RBP12.75□□□□□ -0.37
CSDC2-201ENST00000306149 PYY3Q5JQD4 70 aa12.75□□□□□ -0.37
CSDC2-201ENST00000306149 ZNF525Q8N782 197 aa12.75□□□□□ -0.37
CSDC2-201ENST00000306149 MBD3L1Q8WWY6 194 aa12.75□□□□□ -0.37
CSDC2-201ENST00000306149 RP1L1Q8IWN7 2480 aaPredicted RBP12.75□□□□□ -0.37
CSDC2-201ENST00000306149 RAMP3O60896 148 aa12.75□□□□□ -0.37
CSDC2-201ENST00000306149 RND2P52198 227 aa12.75□□□□□ -0.37
CSDC2-201ENST00000306149 ZNF787Q6DD87 383 aa12.75□□□□□ -0.37
CSDC2-201ENST00000306149 OR8G2PQ6IF36 304 aa12.75□□□□□ -0.37
CSDC2-201ENST00000306149 ZNF808Q8N4W9 903 aaPredicted RBP12.75□□□□□ -0.37
CSDC2-201ENST00000306149 OR1L1Q8NH94 360 aa12.75□□□□□ -0.37
CSDC2-201ENST00000306149 NANOS1Q8WY41 292 aaKnown RBP12.75□□□□□ -0.37
CSDC2-201ENST00000306149 CNOT1A5YKK6 2376 aaKnown RBP12.75□□□□□ -0.37
CSDC2-201ENST00000306149 ICE1Q9Y2F5 2266 aa12.75□□□□□ -0.37
CSDC2-201ENST00000306149 CDX4O14627 284 aaPredicted RBP12.75□□□□□ -0.37
CSDC2-201ENST00000306149 ERVK11-1P61568 191 aa12.75□□□□□ -0.37
CSDC2-201ENST00000306149 ARG2P78540 354 aa12.75□□□□□ -0.37
CSDC2-201ENST00000306149 FGFRL1Q8N441 504 aa12.75□□□□□ -0.37
CSDC2-201ENST00000306149 CACNA1HO95180 2353 aa12.74□□□□□ -0.37
CSDC2-201ENST00000306149 ELOA3CA0A087WX78 387 aaPredicted RBP12.74□□□□□ -0.37
CSDC2-201ENST00000306149 HMGB3O15347 200 aaKnown RBP12.74□□□□□ -0.37
CSDC2-201ENST00000306149 KRASP01116 189 aa12.74□□□□□ -0.37
CSDC2-201ENST00000306149 ZNF883P0CG24 379 aa12.74□□□□□ -0.37
CSDC2-201ENST00000306149 CD46P15529 392 aa12.74□□□□□ -0.37
CSDC2-201ENST00000306149 MPV17P39210 176 aa12.74□□□□□ -0.37
CSDC2-201ENST00000306149 LINC00205P59089 165 aa12.74□□□□□ -0.37
CSDC2-201ENST00000306149 PSG7Q13046 419 aa12.74□□□□□ -0.37
CSDC2-201ENST00000306149 SPNS3Q6ZMD2 512 aa12.74□□□□□ -0.37
CSDC2-201ENST00000306149 BEND4Q6ZU67 534 aa12.74□□□□□ -0.37
CSDC2-201ENST00000306149 C1orf87Q8N0U7 546 aa12.74□□□□□ -0.37
CSDC2-201ENST00000306149 OR4C12Q96R67 309 aa12.74□□□□□ -0.37
CSDC2-201ENST00000306149 P2RX4Q99571 388 aa12.74□□□□□ -0.37
CSDC2-201ENST00000306149 PARD6GQ9BYG4 376 aaPredicted RBP12.74□□□□□ -0.37
CSDC2-201ENST00000306149 CDH20Q9HBT6 801 aa12.74□□□□□ -0.37
CSDC2-201ENST00000306149 FZR1Q9UM11 496 aa12.74□□□□□ -0.37
CSDC2-201ENST00000306149 CADP27708 2225 aa12.74□□□□□ -0.37
CSDC2-201ENST00000306149 TGOLN2O43493 480 aa12.74□□□□□ -0.37
CSDC2-201ENST00000306149 GATCO43716 136 aaKnown RBP12.74□□□□□ -0.37
CSDC2-201ENST00000306149 AGFG2O95081 481 aa12.74□□□□□ -0.37
CSDC2-201ENST00000306149 CYB5R3P00387 301 aaPredicted RBP12.74□□□□□ -0.37
CSDC2-201ENST00000306149 CD55P08174 381 aa12.74□□□□□ -0.37
CSDC2-201ENST00000306149 IGHV1-2P23083 117 aa12.74□□□□□ -0.37
CSDC2-201ENST00000306149 OR3A1P47881 315 aa12.74□□□□□ -0.37
CSDC2-201ENST00000306149 ZNF816Q0VGE8 651 aaPredicted RBP12.74□□□□□ -0.37
CSDC2-201ENST00000306149 MOB1BQ7L9L4 216 aa12.74□□□□□ -0.37
CSDC2-201ENST00000306149 TPRX1Q8N7U7 411 aa12.74□□□□□ -0.37
CSDC2-201ENST00000306149 HEATR1Q9H583 2144 aaKnown RBP12.74□□□□□ -0.37
CSDC2-201ENST00000306149 ZNF729A6NN14 1252 aaPredicted RBP12.73□□□□□ -0.37
CSDC2-201ENST00000306149 SH2D1BO14796 132 aa12.73□□□□□ -0.37
CSDC2-201ENST00000306149 TRGC2P03986 189 aa12.73□□□□□ -0.37
CSDC2-201ENST00000306149 PGA5P0DJD9 388 aa12.73□□□□□ -0.37
CSDC2-201ENST00000306149 UBE2NP61088 152 aaKnown RBP12.73□□□□□ -0.37
CSDC2-201ENST00000306149 NKX6-1P78426 367 aaPredicted RBP12.73□□□□□ -0.37
CSDC2-201ENST00000306149 AESQ08117 197 aa12.73□□□□□ -0.37
CSDC2-201ENST00000306149 ZNF766Q5HY98 468 aa12.73□□□□□ -0.37
CSDC2-201ENST00000306149 HES3Q5TGS1 186 aa12.73□□□□□ -0.37
CSDC2-201ENST00000306149 OR52L2PQ8NGH6 319 aa12.73□□□□□ -0.37
CSDC2-201ENST00000306149 RCC1LQ96I51 464 aaKnown RBP12.73□□□□□ -0.37
CSDC2-201ENST00000306149 OBP2BQ9NPH6 170 aa12.73□□□□□ -0.37
CSDC2-201ENST00000306149 TMEM9BQ9NQ34 198 aa12.73□□□□□ -0.37
CSDC2-201ENST00000306149 TREM2Q9NZC2 230 aa12.73□□□□□ -0.37
CSDC2-201ENST00000306149 UBE2L5PA0A1B0GUS4 154 aa12.73□□□□□ -0.37
CSDC2-201ENST00000306149 G6PCP35575 357 aa12.73□□□□□ -0.37
CSDC2-201ENST00000306149 MDH2P40926 338 aaKnown RBP12.73□□□□□ -0.37
CSDC2-201ENST00000306149 RPL30P62888 115 aaKnown RBP12.73□□□□□ -0.37
CSDC2-201ENST00000306149 HBG1P69891 147 aa12.73□□□□□ -0.37
CSDC2-201ENST00000306149 HBG2P69892 147 aa12.73□□□□□ -0.37
CSDC2-201ENST00000306149 SERF2P84101 59 aa12.73□□□□□ -0.37
CSDC2-201ENST00000306149 FIP1L1Q6UN15 594 aaKnown RBP12.73□□□□□ -0.37
CSDC2-201ENST00000306149 HIST3H2BBQ8N257 126 aa12.73□□□□□ -0.37
CSDC2-201ENST00000306149 CA5BP1Q8WTZ4 195 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms