RNA–Protein interactions for RNA: ENST00000301475.1

ZNF558-201, Transcript of zinc finger protein 558, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF558, Length 3,014 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-201ENST00000301475 MLF1P58340 268 aa9.23□□□□□ -0.93
ZNF558-201ENST00000301475 UBE2NP61088 152 aaKnown RBP9.23□□□□□ -0.93
ZNF558-201ENST00000301475 KIR2DS1Q14954 304 aa9.23□□□□□ -0.93
ZNF558-201ENST00000301475 KRTAP27-1Q3LI81 207 aa9.23□□□□□ -0.93
ZNF558-201ENST00000301475 ZNF114Q8NC26 417 aa9.23□□□□□ -0.93
ZNF558-201ENST00000301475 Q8NFD4 153 aa9.23□□□□□ -0.93
ZNF558-201ENST00000301475 NEIL1Q96FI4 390 aaPredicted RBP9.23□□□□□ -0.93
ZNF558-201ENST00000301475 DERL1Q9BUN8 251 aa9.23□□□□□ -0.93
ZNF558-201ENST00000301475 YLPM1P49750 1951 aaKnown RBP9.23□□□□□ -0.93
ZNF558-201ENST00000301475 C3orf80F5H4A9 247 aa9.23□□□□□ -0.93
ZNF558-201ENST00000301475 ZNHIT1O43257 154 aa9.23□□□□□ -0.93
ZNF558-201ENST00000301475 DKK1O94907 266 aa9.23□□□□□ -0.93
ZNF558-201ENST00000301475 IGLV2-14P01704 120 aa9.23□□□□□ -0.93
ZNF558-201ENST00000301475 PSG4Q00888 419 aa9.23□□□□□ -0.93
ZNF558-201ENST00000301475 PMP22Q01453 160 aa9.23□□□□□ -0.93
ZNF558-201ENST00000301475 SPACA9Q96E40 222 aaPredicted RBP9.23□□□□□ -0.93
ZNF558-201ENST00000301475 RIMS4Q9H426 269 aaPredicted RBP9.23□□□□□ -0.93
ZNF558-201ENST00000301475 ERRFI1Q9UJM3 462 aaPredicted RBP9.23□□□□□ -0.93
ZNF558-201ENST00000301475 OR2W1Q9Y3N9 320 aa9.23□□□□□ -0.93
ZNF558-201ENST00000301475 TIAF1O95411 115 aa9.22□□□□□ -0.93
ZNF558-201ENST00000301475 CRYAAP02489 173 aa9.22□□□□□ -0.93
ZNF558-201ENST00000301475 CARFQ8N187 725 aa9.22□□□□□ -0.93
ZNF558-201ENST00000301475 OR10G9Q8NGN4 311 aa9.22□□□□□ -0.93
ZNF558-201ENST00000301475 OR10G7Q8NGN6 311 aa9.22□□□□□ -0.93
ZNF558-201ENST00000301475 LSM10Q969L4 123 aaKnown RBP9.22□□□□□ -0.93
ZNF558-201ENST00000301475 PHF7Q9BWX1 381 aaPredicted RBP9.22□□□□□ -0.93
ZNF558-201ENST00000301475 RNF114Q9Y508 228 aa9.22□□□□□ -0.93
ZNF558-201ENST00000301475 CHCHD2Q9Y6H1 151 aaPredicted RBP9.22□□□□□ -0.93
ZNF558-201ENST00000301475 FRYQ5TBA9 3013 aa9.22□□□□□ -0.93
ZNF558-201ENST00000301475 IGLV3-12A0A075B6K2 115 aa9.22□□□□□ -0.93
ZNF558-201ENST00000301475 TCF21O43680 179 aa9.22□□□□□ -0.93
ZNF558-201ENST00000301475 SPINK2P20155 84 aa9.22□□□□□ -0.93
ZNF558-201ENST00000301475 COMPP49747 757 aaPredicted RBP9.22□□□□□ -0.93
ZNF558-201ENST00000301475 ZNF585BQ52M93 769 aa9.22□□□□□ -0.93
ZNF558-201ENST00000301475 SRXN1Q9BYN0 137 aa9.22□□□□□ -0.93
ZNF558-201ENST00000301475 WNT5BQ9H1J7 359 aa9.22□□□□□ -0.93
ZNF558-201ENST00000301475 TMEM38BQ9NVV0 291 aa9.22□□□□□ -0.93
ZNF558-201ENST00000301475 ELOVL5Q9NYP7 299 aa9.22□□□□□ -0.93
ZNF558-201ENST00000301475 OR1A1Q9P1Q5 309 aa9.22□□□□□ -0.93
ZNF558-201ENST00000301475 PPIAL4AQ9Y536 164 aa9.22□□□□□ -0.93
ZNF558-201ENST00000301475 TIMM9Q9Y5J7 89 aa9.22□□□□□ -0.93
ZNF558-201ENST00000301475 BDP1A6H8Y1 2624 aa9.21□□□□□ -0.93
ZNF558-201ENST00000301475 FREM2Q5SZK8 3169 aa9.21□□□□□ -0.93
ZNF558-201ENST00000301475 FAM90A10PA6NDY2 464 aa9.21□□□□□ -0.93
ZNF558-201ENST00000301475 FAM90A18PA6NE21 464 aa9.21□□□□□ -0.93
ZNF558-201ENST00000301475 FAM90A16PA6NEW6 464 aa9.21□□□□□ -0.93
ZNF558-201ENST00000301475 FAM90A20PA6NIJ5 464 aa9.21□□□□□ -0.93
ZNF558-201ENST00000301475 FAM90A8PA6NJQ4 464 aa9.21□□□□□ -0.93
ZNF558-201ENST00000301475 FAM90A7PA6NKC0 464 aa9.21□□□□□ -0.93
ZNF558-201ENST00000301475 FAM90A22PA8MWA6 464 aa9.21□□□□□ -0.93
ZNF558-201ENST00000301475 FAM90A12PA8MX19 464 aa9.21□□□□□ -0.93
ZNF558-201ENST00000301475 FAM90A5PA8MXJ8 464 aa9.21□□□□□ -0.93
ZNF558-201ENST00000301475 FAM90A23PA8MXZ1 464 aa9.21□□□□□ -0.93
ZNF558-201ENST00000301475 C11orf94C9JXX5 98 aa9.21□□□□□ -0.93
ZNF558-201ENST00000301475 HS3ST1O14792 307 aa9.21□□□□□ -0.93
ZNF558-201ENST00000301475 RBFOX2O43251 390 aaKnown RBP eCLIP9.21□□□□□ -0.93
ZNF558-201ENST00000301475 SIAH2O43255 324 aa9.21□□□□□ -0.93
ZNF558-201ENST00000301475 FAM90A15PP0C7V4 464 aa9.21□□□□□ -0.93
ZNF558-201ENST00000301475 FAM90A13PP0C7W8 464 aa9.21□□□□□ -0.93
ZNF558-201ENST00000301475 FAM90A14PP0C7W9 464 aa9.21□□□□□ -0.93
ZNF558-201ENST00000301475 FAM90A24PP0C7X0 464 aa9.21□□□□□ -0.93
ZNF558-201ENST00000301475 CD82P27701 267 aa9.21□□□□□ -0.93
ZNF558-201ENST00000301475 GNG10P50151 68 aa9.21□□□□□ -0.93
ZNF558-201ENST00000301475 SOX8P57073 446 aa9.21□□□□□ -0.93
ZNF558-201ENST00000301475 FGF12P61328 243 aa9.21□□□□□ -0.93
ZNF558-201ENST00000301475 GNB1P62873 340 aa9.21□□□□□ -0.93
ZNF558-201ENST00000301475 TFF3Q07654 80 aa9.21□□□□□ -0.93
ZNF558-201ENST00000301475 RAET1LQ5VY80 246 aa9.21□□□□□ -0.93
ZNF558-201ENST00000301475 TMEM14EPQ6UXP3 125 aa9.21□□□□□ -0.93
ZNF558-201ENST00000301475 VN1R17PQ8TDU5 208 aa9.21□□□□□ -0.93
ZNF558-201ENST00000301475 OR5P3Q8WZ94 311 aa9.21□□□□□ -0.93
ZNF558-201ENST00000301475 DNAJC4Q9NNZ3 241 aa9.21□□□□□ -0.93
ZNF558-201ENST00000301475 F2Z2F3 143 aa9.21□□□□□ -0.94
ZNF558-201ENST00000301475 TNFSF11O14788 317 aa9.21□□□□□ -0.94
ZNF558-201ENST00000301475 ZFAND5O76080 213 aa9.21□□□□□ -0.94
ZNF558-201ENST00000301475 IGLV3-19P01714 112 aa9.21□□□□□ -0.94
ZNF558-201ENST00000301475 CTXN2P0C2S0 81 aa9.21□□□□□ -0.94
ZNF558-201ENST00000301475 CLDN15P56746 228 aa9.21□□□□□ -0.94
ZNF558-201ENST00000301475 TMEM183BQ1AE95 376 aa9.21□□□□□ -0.94
ZNF558-201ENST00000301475 FBXW9Q5XUX1 488 aa9.21□□□□□ -0.94
ZNF558-201ENST00000301475 SGMS2Q8NHU3 365 aa9.21□□□□□ -0.94
ZNF558-201ENST00000301475 HLA-CQ95604 372 aa9.21□□□□□ -0.94
ZNF558-201ENST00000301475 HSPB9Q9BQS6 159 aa9.21□□□□□ -0.94
ZNF558-201ENST00000301475 OR51B6Q9H340 312 aa9.21□□□□□ -0.94
ZNF558-201ENST00000301475 ASCL3Q9NQ33 180 aa9.21□□□□□ -0.94
ZNF558-201ENST00000301475 MTCH1Q9NZJ7 389 aa9.21□□□□□ -0.94
ZNF558-201ENST00000301475 FREM1Q5H8C1 2179 aa9.21□□□□□ -0.94
ZNF558-201ENST00000301475 A0A0J9YW62 118 aa9.21□□□□□ -0.94
ZNF558-201ENST00000301475 LMO7DNF2Z398 122 aa9.21□□□□□ -0.94
ZNF558-201ENST00000301475 SERF1AO75920 110 aa9.21□□□□□ -0.94
ZNF558-201ENST00000301475 VAMP5O95183 116 aa9.21□□□□□ -0.94
ZNF558-201ENST00000301475 CLDN1O95832 211 aa9.21□□□□□ -0.94
ZNF558-201ENST00000301475 ATP5G3P48201 142 aa9.21□□□□□ -0.94
ZNF558-201ENST00000301475 FFAR4Q5NUL3 377 aa9.21□□□□□ -0.94
ZNF558-201ENST00000301475 NUFIP2Q7Z417 695 aaKnown RBP9.21□□□□□ -0.94
ZNF558-201ENST00000301475 PLXDC1Q8IUK5 500 aa9.21□□□□□ -0.94
ZNF558-201ENST00000301475 C11orf42Q8N5U0 333 aa9.21□□□□□ -0.94
ZNF558-201ENST00000301475 OR56B2PQ8NGI1 322 aa9.21□□□□□ -0.94
ZNF558-201ENST00000301475 CLDN23Q96B33 292 aa9.21□□□□□ -0.94
ZNF558-201ENST00000301475 VAMP8Q9BV40 100 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms