RNA–Protein interactions for RNA: ENST00000298537.11

SDCCAG3-201, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 1 (best) BASIC

Gene SDCCAG3, Length 2,314 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-201ENST00000298537 NMBP08949 121 aa21.24■□□□□ 0.99
SDCCAG3-201ENST00000298537 CGB3P0DN86 165 aa21.24■□□□□ 0.99
SDCCAG3-201ENST00000298537 CGB7P0DN87 165 aa21.24■□□□□ 0.99
SDCCAG3-201ENST00000298537 MUC1P15941 1255 aaPredicted RBP21.24■□□□□ 0.99
SDCCAG3-201ENST00000298537 GZMHP20718 246 aa21.24■□□□□ 0.99
SDCCAG3-201ENST00000298537 RPL12P30050 165 aaKnown RBP21.24■□□□□ 0.99
SDCCAG3-201ENST00000298537 CR1LQ2VPA4 569 aa21.24■□□□□ 0.99
SDCCAG3-201ENST00000298537 LYPD2Q6UXB3 125 aa21.24■□□□□ 0.99
SDCCAG3-201ENST00000298537 C14orf79Q96F83 325 aa21.24■□□□□ 0.99
SDCCAG3-201ENST00000298537 SMIM3Q9BZL3 60 aa21.24■□□□□ 0.99
SDCCAG3-201ENST00000298537 EGLN1Q9GZT9 426 aa21.24■□□□□ 0.99
SDCCAG3-201ENST00000298537 A0A1W2PPE3 182 aa21.24■□□□□ 0.99
SDCCAG3-201ENST00000298537 PROP1O75360 226 aa21.24■□□□□ 0.99
SDCCAG3-201ENST00000298537 IGKV1-5P01602 117 aa21.24■□□□□ 0.99
SDCCAG3-201ENST00000298537 UBA52P62987 128 aaKnown RBP21.24■□□□□ 0.99
SDCCAG3-201ENST00000298537 SDHAF2Q9NX18 166 aa21.24■□□□□ 0.99
SDCCAG3-201ENST00000298537 COL12A1Q99715 3063 aa21.24■□□□□ 0.99
SDCCAG3-201ENST00000298537 LEUTXA8MZ59 168 aa21.23■□□□□ 0.99
SDCCAG3-201ENST00000298537 SIGLEC5O15389 551 aa21.23■□□□□ 0.99
SDCCAG3-201ENST00000298537 SLC31A2O15432 143 aa21.23■□□□□ 0.99
SDCCAG3-201ENST00000298537 MMP23AO75900 390 aa21.23■□□□□ 0.99
SDCCAG3-201ENST00000298537 HTD2P86397 168 aa21.23■□□□□ 0.99
SDCCAG3-201ENST00000298537 SMCO1Q147U7 214 aa21.23■□□□□ 0.99
SDCCAG3-201ENST00000298537 MORN2Q502X0 79 aa21.23■□□□□ 0.99
SDCCAG3-201ENST00000298537 LRRC30A6NM36 301 aa21.23■□□□□ 0.99
SDCCAG3-201ENST00000298537 MUC15Q8N387 334 aa21.23■□□□□ 0.99
SDCCAG3-201ENST00000298537 FAM122AQ96E09 287 aa21.23■□□□□ 0.99
SDCCAG3-201ENST00000298537 ANKRD34BA5PLL1 514 aa21.22■□□□□ 0.99
SDCCAG3-201ENST00000298537 LINC00473A8K010 186 aa21.22■□□□□ 0.99
SDCCAG3-201ENST00000298537 ST8SIA3O43173 380 aa21.22■□□□□ 0.99
SDCCAG3-201ENST00000298537 CLDN14O95500 239 aa21.22■□□□□ 0.99
SDCCAG3-201ENST00000298537 EFNB3Q15768 340 aa21.22■□□□□ 0.99
SDCCAG3-201ENST00000298537 SWI5Q1ZZU3 235 aa21.22■□□□□ 0.99
SDCCAG3-201ENST00000298537 Q3ZCU0 254 aa21.22■□□□□ 0.99
SDCCAG3-201ENST00000298537 ZC4H2Q9NQZ6 224 aa21.22■□□□□ 0.99
SDCCAG3-201ENST00000298537 HCFC1P51610 2035 aa21.22■□□□□ 0.99
SDCCAG3-201ENST00000298537 LINC00862A6NCI5 91 aa21.22■□□□□ 0.99
SDCCAG3-201ENST00000298537 LGALS8O00214 317 aa21.22■□□□□ 0.99
SDCCAG3-201ENST00000298537 NDUFB7P17568 137 aa21.22■□□□□ 0.99
SDCCAG3-201ENST00000298537 NUP62P37198 522 aaPredicted RBP21.22■□□□□ 0.99
SDCCAG3-201ENST00000298537 ZNF672Q499Z4 452 aaPredicted RBP21.22■□□□□ 0.99
SDCCAG3-201ENST00000298537 C1orf229Q6ZS94 237 aaPredicted RBP21.22■□□□□ 0.99
SDCCAG3-201ENST00000298537 POMT1Q9Y6A1 747 aa21.22■□□□□ 0.99
SDCCAG3-201ENST00000298537 PPIAL4EA0A075B759 164 aa21.21■□□□□ 0.99
SDCCAG3-201ENST00000298537 C17orf98A8MV24 154 aa21.21■□□□□ 0.99
SDCCAG3-201ENST00000298537 B9A039 149 aa21.21■□□□□ 0.99
SDCCAG3-201ENST00000298537 PPIAL4DF5H284 164 aa21.21■□□□□ 0.99
SDCCAG3-201ENST00000298537 PPIAL4FP0DN26 164 aa21.21■□□□□ 0.99
SDCCAG3-201ENST00000298537 MS4A5Q9H3V2 200 aa21.21■□□□□ 0.99
SDCCAG3-201ENST00000298537 PPIAL4AQ9Y536 164 aa21.21■□□□□ 0.99
SDCCAG3-201ENST00000298537 NKX2-1P43699 371 aaPredicted RBP21.21■□□□□ 0.99
SDCCAG3-201ENST00000298537 RAB14P61106 215 aa21.21■□□□□ 0.99
SDCCAG3-201ENST00000298537 ZNF816Q0VGE8 651 aaPredicted RBP21.21■□□□□ 0.99
SDCCAG3-201ENST00000298537 RPL7L1Q6DKI1 246 aaKnown RBP21.21■□□□□ 0.99
SDCCAG3-201ENST00000298537 TRAT1Q6PIZ9 186 aa21.21■□□□□ 0.99
SDCCAG3-201ENST00000298537 IL22RA2Q969J5 263 aa21.21■□□□□ 0.99
SDCCAG3-201ENST00000298537 PLEKHF2Q9H8W4 249 aa21.21■□□□□ 0.99
SDCCAG3-201ENST00000298537 OR6C3Q9NZP0 311 aa21.21■□□□□ 0.99
SDCCAG3-201ENST00000298537 TANC2Q9HCD6 1990 aa21.21■□□□□ 0.99
SDCCAG3-201ENST00000298537 F2RL2O00254 374 aa21.2■□□□□ 0.98
SDCCAG3-201ENST00000298537 SSSCA1O60232 199 aa21.2■□□□□ 0.98
SDCCAG3-201ENST00000298537 TMEM50AO95807 157 aa21.2■□□□□ 0.98
SDCCAG3-201ENST00000298537 C11orf1Q9H5F2 150 aa21.2■□□□□ 0.98
SDCCAG3-201ENST00000298537 C19orf12Q9NSK7 152 aa21.2■□□□□ 0.98
SDCCAG3-201ENST00000298537 LIN7CQ9NUP9 197 aaKnown RBP21.2■□□□□ 0.98
SDCCAG3-201ENST00000298537 FBXL17Q9UF56 701 aa21.2■□□□□ 0.98
SDCCAG3-201ENST00000298537 USP24Q9UPU5 2620 aa21.2■□□□□ 0.98
SDCCAG3-201ENST00000298537 YLPM1P49750 1951 aaKnown RBP21.2■□□□□ 0.98
SDCCAG3-201ENST00000298537 E5RGE8 158 aa21.2■□□□□ 0.98
SDCCAG3-201ENST00000298537 WNT2P09544 360 aa21.2■□□□□ 0.98
SDCCAG3-201ENST00000298537 LPAR6P43657 344 aa21.2■□□□□ 0.98
SDCCAG3-201ENST00000298537 TMEM33P57088 247 aa21.2■□□□□ 0.98
SDCCAG3-201ENST00000298537 NSG2Q9Y328 171 aa21.2■□□□□ 0.98
SDCCAG3-201ENST00000298537 TRAV38-1A0A0B4J264 116 aa21.19■□□□□ 0.98
SDCCAG3-201ENST00000298537 CLEC18AA5D8T8 446 aa21.19■□□□□ 0.98
SDCCAG3-201ENST00000298537 NHLH2Q02577 135 aa21.19■□□□□ 0.98
SDCCAG3-201ENST00000298537 ZNF273Q14593 569 aa21.19■□□□□ 0.98
SDCCAG3-201ENST00000298537 RPL39P5Q59GN2 51 aa21.19■□□□□ 0.98
SDCCAG3-201ENST00000298537 CLEC18CQ8NCF0 446 aa21.19■□□□□ 0.98
SDCCAG3-201ENST00000298537 TCTEX1D2Q8WW35 142 aa21.19■□□□□ 0.98
SDCCAG3-201ENST00000298537 ZNRD1Q9P1U0 126 aa21.19■□□□□ 0.98
SDCCAG3-201ENST00000298537 CTSZQ9UBR2 303 aa21.19■□□□□ 0.98
SDCCAG3-201ENST00000298537 JPT1Q9UK76 154 aa21.19■□□□□ 0.98
SDCCAG3-201ENST00000298537 DUXBA0A1W2PPF3 345 aa21.18■□□□□ 0.98
SDCCAG3-201ENST00000298537 LY6HO94772 140 aa21.18■□□□□ 0.98
SDCCAG3-201ENST00000298537 AKR1C2P52895 323 aa21.18■□□□□ 0.98
SDCCAG3-201ENST00000298537 RNASE11Q8TAA1 199 aaKnown RBP21.18■□□□□ 0.98
SDCCAG3-201ENST00000298537 SLC25A10Q9UBX3 287 aaPredicted RBP21.18■□□□□ 0.98
SDCCAG3-201ENST00000298537 CACNG5Q9UF02 275 aa21.18■□□□□ 0.98
SDCCAG3-201ENST00000298537 CACNA1BQ00975 2339 aa21.18■□□□□ 0.98
SDCCAG3-201ENST00000298537 KBTBD11-OT1A0A1B0GTJ5 212 aa21.18■□□□□ 0.98
SDCCAG3-201ENST00000298537 FAM24AA6NFZ4 105 aa21.18■□□□□ 0.98
SDCCAG3-201ENST00000298537 COL8A2P25067 703 aa21.18■□□□□ 0.98
SDCCAG3-201ENST00000298537 NFYBP25208 207 aa21.18■□□□□ 0.98
SDCCAG3-201ENST00000298537 COMMD7Q86VX2 200 aa21.18■□□□□ 0.98
SDCCAG3-201ENST00000298537 TMEM204Q9BSN7 226 aa21.18■□□□□ 0.98
SDCCAG3-201ENST00000298537 CLN8Q9UBY8 286 aa21.18■□□□□ 0.98
SDCCAG3-201ENST00000298537 IGHV1-69-2A0A0G2JMI3 117 aa21.17■□□□□ 0.98
SDCCAG3-201ENST00000298537 SMUG1Q53HV7 270 aa21.17■□□□□ 0.98
SDCCAG3-201ENST00000298537 FAM234AQ9H0X4 552 aa21.17■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms