RNA–Protein interactions for RNA: ENST00000294489.10

PDPN-201, Transcript of podoplanin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDPN, Length 3,104 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-201ENST00000294489 EDDM3BP56851 147 aa7.61□□□□□ -1.19
PDPN-201ENST00000294489 NHLH2Q02577 135 aa7.61□□□□□ -1.19
PDPN-201ENST00000294489 FAM209AQ5JX71 171 aa7.61□□□□□ -1.19
PDPN-201ENST00000294489 CLEC9AQ6UXN8 241 aa7.61□□□□□ -1.19
PDPN-201ENST00000294489 ZNF561Q8N587 486 aa7.61□□□□□ -1.19
PDPN-201ENST00000294489 ZNRF1Q8ND25 227 aa7.61□□□□□ -1.19
PDPN-201ENST00000294489 OR1S2Q8NGQ3 325 aa7.61□□□□□ -1.19
PDPN-201ENST00000294489 PLPPR2Q96GM1 343 aa7.61□□□□□ -1.19
PDPN-201ENST00000294489 RAB9BQ9NP90 201 aa7.61□□□□□ -1.19
PDPN-201ENST00000294489 OR6C3Q9NZP0 311 aa7.61□□□□□ -1.19
PDPN-201ENST00000294489 NDRG3Q9UGV2 375 aa7.61□□□□□ -1.19
PDPN-201ENST00000294489 FAM24AA6NFZ4 105 aa7.61□□□□□ -1.19
PDPN-201ENST00000294489 C15orf65H3BRN8 121 aa7.61□□□□□ -1.19
PDPN-201ENST00000294489 LGALS8O00214 317 aa7.61□□□□□ -1.19
PDPN-201ENST00000294489 PITX3O75364 302 aa7.61□□□□□ -1.19
PDPN-201ENST00000294489 ATG12O94817 140 aa7.61□□□□□ -1.19
PDPN-201ENST00000294489 GRNP28799 593 aaKnown RBP7.61□□□□□ -1.19
PDPN-201ENST00000294489 CD80P33681 288 aa7.61□□□□□ -1.19
PDPN-201ENST00000294489 STUMQ69YW2 141 aa7.61□□□□□ -1.19
PDPN-201ENST00000294489 ZNF808Q8N4W9 903 aaPredicted RBP7.61□□□□□ -1.19
PDPN-201ENST00000294489 LRRC46Q96FV0 321 aa7.61□□□□□ -1.19
PDPN-201ENST00000294489 SDSLQ96GA7 329 aa7.61□□□□□ -1.19
PDPN-201ENST00000294489 LINC00052Q96N35 136 aa7.61□□□□□ -1.19
PDPN-201ENST00000294489 C11orf1Q9H5F2 150 aa7.61□□□□□ -1.19
PDPN-201ENST00000294489 GNG12Q9UBI6 72 aa7.61□□□□□ -1.19
PDPN-201ENST00000294489 DYSFO75923 2080 aa7.61□□□□□ -1.19
PDPN-201ENST00000294489 PIEZO1Q92508 2521 aa7.61□□□□□ -1.19
PDPN-201ENST00000294489 POLEQ07864 2286 aa7.61□□□□□ -1.19
PDPN-201ENST00000294489 IGHV3-43A0A0B4J1X8 118 aa7.61□□□□□ -1.19
PDPN-201ENST00000294489 A0A0G2JRQ6 117 aa7.61□□□□□ -1.19
PDPN-201ENST00000294489 RAB19A4D1S5 217 aa7.61□□□□□ -1.19
PDPN-201ENST00000294489 LRRC30A6NM36 301 aa7.61□□□□□ -1.19
PDPN-201ENST00000294489 FAM90A27PA6NNH2 459 aa7.61□□□□□ -1.19
PDPN-201ENST00000294489 CHST1O43916 411 aa7.61□□□□□ -1.19
PDPN-201ENST00000294489 IGKV1-39P01597 117 aa7.61□□□□□ -1.19
PDPN-201ENST00000294489 IGKV1D-39P04432 117 aa7.61□□□□□ -1.19
PDPN-201ENST00000294489 IGHV3-43DP0DP04 118 aa7.61□□□□□ -1.19
PDPN-201ENST00000294489 BTF3P20290 206 aaKnown RBP7.61□□□□□ -1.19
PDPN-201ENST00000294489 SULT1A2P50226 295 aa7.61□□□□□ -1.19
PDPN-201ENST00000294489 BLOC1S1P78537 153 aa7.61□□□□□ -1.19
PDPN-201ENST00000294489 ZNF266Q14584 549 aa7.61□□□□□ -1.19
PDPN-201ENST00000294489 SWI5Q1ZZU3 235 aa7.61□□□□□ -1.19
PDPN-201ENST00000294489 ZNF585BQ52M93 769 aa7.61□□□□□ -1.19
PDPN-201ENST00000294489 C4orf17Q53FE4 359 aa7.61□□□□□ -1.19
PDPN-201ENST00000294489 ADAM5Q6NVV9 412 aa7.61□□□□□ -1.19
PDPN-201ENST00000294489 UQCC3Q6UW78 93 aa7.61□□□□□ -1.19
PDPN-201ENST00000294489 TCTEX1D1Q8N7M0 179 aa7.61□□□□□ -1.19
PDPN-201ENST00000294489 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.61□□□□□ -1.19
PDPN-201ENST00000294489 FAM216AQ8WUB2 273 aa7.61□□□□□ -1.19
PDPN-201ENST00000294489 DCTN5Q9BTE1 182 aa7.61□□□□□ -1.19
PDPN-201ENST00000294489 FAM212BQ9NTI7 297 aaPredicted RBP7.61□□□□□ -1.19
PDPN-201ENST00000294489 CACNG5Q9UF02 275 aa7.61□□□□□ -1.19
PDPN-201ENST00000294489 JPT1Q9UK76 154 aa7.61□□□□□ -1.19
PDPN-201ENST00000294489 NUP50Q9UKX7 468 aa7.61□□□□□ -1.19
PDPN-201ENST00000294489 DSCAML1Q8TD84 2053 aa7.6□□□□□ -1.19
PDPN-201ENST00000294489 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7.6□□□□□ -1.19
PDPN-201ENST00000294489 DEFB108AA8MXU0 73 aa7.6□□□□□ -1.19
PDPN-201ENST00000294489 TNFRSF13BO14836 293 aaPredicted RBP7.6□□□□□ -1.19
PDPN-201ENST00000294489 MED6O75586 246 aa7.6□□□□□ -1.19
PDPN-201ENST00000294489 NXPH3O95157 252 aa7.6□□□□□ -1.19
PDPN-201ENST00000294489 CYB5R3P00387 301 aaPredicted RBP7.6□□□□□ -1.19
PDPN-201ENST00000294489 CD3EP07766 207 aa7.6□□□□□ -1.19
PDPN-201ENST00000294489 SEC11BP0C7V7 166 aa7.6□□□□□ -1.19
PDPN-201ENST00000294489 APOBEC3AP31941 199 aaPredicted RBP7.6□□□□□ -1.19
PDPN-201ENST00000294489 LPAR6P43657 344 aa7.6□□□□□ -1.19
PDPN-201ENST00000294489 RPL23AP62750 156 aaKnown RBP7.6□□□□□ -1.19
PDPN-201ENST00000294489 BAXQ07812 192 aa7.6□□□□□ -1.19
PDPN-201ENST00000294489 ZNF66Q6ZN08 573 aa7.6□□□□□ -1.19
PDPN-201ENST00000294489 TMEM252Q8N6L7 170 aa7.6□□□□□ -1.19
PDPN-201ENST00000294489 C14orf79Q96F83 325 aa7.6□□□□□ -1.19
PDPN-201ENST00000294489 BSCL2Q96G97 398 aaPredicted RBP7.6□□□□□ -1.19
PDPN-201ENST00000294489 SMIM8Q96KF7 97 aa7.6□□□□□ -1.19
PDPN-201ENST00000294489 RAB40CQ96S21 281 aa7.6□□□□□ -1.19
PDPN-201ENST00000294489 ARV1Q9H2C2 271 aa7.6□□□□□ -1.19
PDPN-201ENST00000294489 KCNJ16Q9NPI9 418 aa7.6□□□□□ -1.19
PDPN-201ENST00000294489 MEX3AA1L020 520 aaKnown RBP7.6□□□□□ -1.19
PDPN-201ENST00000294489 CLDN1O95832 211 aa7.6□□□□□ -1.19
PDPN-201ENST00000294489 MUC1P15941 1255 aaPredicted RBP7.6□□□□□ -1.19
PDPN-201ENST00000294489 TAGLNQ01995 201 aaKnown RBP7.6□□□□□ -1.19
PDPN-201ENST00000294489 LTC4SQ16873 150 aa7.6□□□□□ -1.19
PDPN-201ENST00000294489 FAM201AQ5SY85 155 aa7.6□□□□□ -1.19
PDPN-201ENST00000294489 FGFRL1Q8N441 504 aa7.6□□□□□ -1.19
PDPN-201ENST00000294489 TCTEX1D2Q8WW35 142 aa7.6□□□□□ -1.19
PDPN-201ENST00000294489 HSD17B10Q99714 261 aaKnown RBP7.6□□□□□ -1.19
PDPN-201ENST00000294489 EGLN1Q9GZT9 426 aa7.6□□□□□ -1.19
PDPN-201ENST00000294489 ZNF665Q9H7R5 613 aa7.6□□□□□ -1.19
PDPN-201ENST00000294489 MMP26Q9NRE1 261 aa7.6□□□□□ -1.19
PDPN-201ENST00000294489 PSG11Q9UQ72 335 aa7.6□□□□□ -1.19
PDPN-201ENST00000294489 RNF115Q9Y4L5 304 aa7.6□□□□□ -1.19
PDPN-201ENST00000294489 IGSF23A1L1A6 192 aa7.59□□□□□ -1.19
PDPN-201ENST00000294489 IGKV1-5P01602 117 aa7.59□□□□□ -1.19
PDPN-201ENST00000294489 CGB3P0DN86 165 aa7.59□□□□□ -1.19
PDPN-201ENST00000294489 CGB7P0DN87 165 aa7.59□□□□□ -1.19
PDPN-201ENST00000294489 OMGP23515 440 aa7.59□□□□□ -1.19
PDPN-201ENST00000294489 CCL8P80075 99 aa7.59□□□□□ -1.19
PDPN-201ENST00000294489 TUSC1Q2TAM9 212 aa7.59□□□□□ -1.19
PDPN-201ENST00000294489 STX12Q86Y82 276 aa7.59□□□□□ -1.19
PDPN-201ENST00000294489 DEFB108BQ8NET1 73 aa7.59□□□□□ -1.19
PDPN-201ENST00000294489 LINC01560Q8TB33 94 aa7.59□□□□□ -1.19
PDPN-201ENST00000294489 NARS2Q96I59 477 aaKnown RBP7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms