RNA–Protein interactions for RNA: ENST00000292478.8

PTCD1-201, Transcript of pentatricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD1, Length 5,582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-201ENST00000292478 SRXN1Q9BYN0 137 aa11.03□□□□□ -0.64
PTCD1-201ENST00000292478 RCC1P18754 421 aaPredicted RBP11.02□□□□□ -0.64
PTCD1-201ENST00000292478 GPR6P46095 362 aaPredicted RBP11.02□□□□□ -0.64
PTCD1-201ENST00000292478 MMDQ15546 238 aa11.02□□□□□ -0.64
PTCD1-201ENST00000292478 ISOC2Q96AB3 205 aa11.02□□□□□ -0.64
PTCD1-201ENST00000292478 WDR90Q96KV7 1748 aa11.02□□□□□ -0.65
PTCD1-201ENST00000292478 HYPMO75409 117 aa11.02□□□□□ -0.65
PTCD1-201ENST00000292478 FAM3BP58499 235 aaPredicted RBP11.02□□□□□ -0.65
PTCD1-201ENST00000292478 TMEM171Q8WVE6 324 aa11.02□□□□□ -0.65
PTCD1-201ENST00000292478 PAXXQ9BUH6 204 aa11.02□□□□□ -0.65
PTCD1-201ENST00000292478 JPT1Q9UK76 154 aa11.02□□□□□ -0.65
PTCD1-201ENST00000292478 BRCA1P38398 1863 aaKnown RBP11.02□□□□□ -0.65
PTCD1-201ENST00000292478 M0R143 59 aa11.02□□□□□ -0.65
PTCD1-201ENST00000292478 LMX1BO60663 402 aa11.02□□□□□ -0.65
PTCD1-201ENST00000292478 CTSBP07858 339 aa11.02□□□□□ -0.65
PTCD1-201ENST00000292478 RPL27AP46776 148 aaKnown RBP11.02□□□□□ -0.65
PTCD1-201ENST00000292478 NRN1LQ496H8 165 aa11.02□□□□□ -0.65
PTCD1-201ENST00000292478 TMUB1Q9BVT8 246 aa11.02□□□□□ -0.65
PTCD1-201ENST00000292478 PTGDSP41222 190 aa11.02□□□□□ -0.65
PTCD1-201ENST00000292478 CCL13Q99616 98 aa11.02□□□□□ -0.65
PTCD1-201ENST00000292478 SFXN3Q9BWM7 321 aa11.02□□□□□ -0.65
PTCD1-201ENST00000292478 IDI2-AS1Q9NZ38 188 aa11.02□□□□□ -0.65
PTCD1-201ENST00000292478 WASHC3Q9Y3C0 194 aa11.02□□□□□ -0.65
PTCD1-201ENST00000292478 PACRGQ96M98 296 aaPredicted RBP11.01□□□□□ -0.65
PTCD1-201ENST00000292478 RSRP1Q9BUV0 290 aa11.01□□□□□ -0.65
PTCD1-201ENST00000292478 PXMP4Q9Y6I8 212 aa11.01□□□□□ -0.65
PTCD1-201ENST00000292478 NKX2-8O15522 239 aa11.01□□□□□ -0.65
PTCD1-201ENST00000292478 CYB5R3P00387 301 aaPredicted RBP11.01□□□□□ -0.65
PTCD1-201ENST00000292478 RPS11P62280 158 aaKnown RBP eCLIP11.01□□□□□ -0.65
PTCD1-201ENST00000292478 LYRM7Q5U5X0 104 aa11.01□□□□□ -0.65
PTCD1-201ENST00000292478 PRR7Q8TB68 274 aa11.01□□□□□ -0.65
PTCD1-201ENST00000292478 KCNMB1Q16558 191 aa11.01□□□□□ -0.65
PTCD1-201ENST00000292478 MMD2Q8IY49 270 aa11.01□□□□□ -0.65
PTCD1-201ENST00000292478 ITLN1Q8WWA0 313 aa11.01□□□□□ -0.65
PTCD1-201ENST00000292478 MAP1LC3CQ9BXW4 147 aa11.01□□□□□ -0.65
PTCD1-201ENST00000292478 A0A1W2PRD5 423 aa11.01□□□□□ -0.65
PTCD1-201ENST00000292478 A0A1W2PRF3 423 aa11.01□□□□□ -0.65
PTCD1-201ENST00000292478 A0A1W2PRM7 423 aa11.01□□□□□ -0.65
PTCD1-201ENST00000292478 THY1P04216 161 aa11.01□□□□□ -0.65
PTCD1-201ENST00000292478 ATP5IP56385 69 aaPredicted RBP11.01□□□□□ -0.65
PTCD1-201ENST00000292478 LINC00114Q6XXX2 140 aa11.01□□□□□ -0.65
PTCD1-201ENST00000292478 GTF2H5Q6ZYL4 71 aa11.01□□□□□ -0.65
PTCD1-201ENST00000292478 OR5AU1Q8NGC0 362 aa11.01□□□□□ -0.65
PTCD1-201ENST00000292478 RBKSQ9H477 322 aa11.01□□□□□ -0.65
PTCD1-201ENST00000292478 BET1LQ9NYM9 111 aa11.01□□□□□ -0.65
PTCD1-201ENST00000292478 NAGKQ9UJ70 344 aa11.01□□□□□ -0.65
PTCD1-201ENST00000292478 SCN3AQ9NY46 2000 aa11.01□□□□□ -0.65
PTCD1-201ENST00000292478 BRWD1Q9NSI6 2320 aa11.01□□□□□ -0.65
PTCD1-201ENST00000292478 MFSD2BA6NFX1 497 aa11.01□□□□□ -0.65
PTCD1-201ENST00000292478 DLL1O00548 723 aa11.01□□□□□ -0.65
PTCD1-201ENST00000292478 ADAM11O75078 769 aa11.01□□□□□ -0.65
PTCD1-201ENST00000292478 Q1RN00 199 aa11.01□□□□□ -0.65
PTCD1-201ENST00000292478 C19orf48Q6RUI8 117 aa11.01□□□□□ -0.65
PTCD1-201ENST00000292478 ODAMA1E959 279 aa11□□□□□ -0.65
PTCD1-201ENST00000292478 MUC1P15941 1255 aaPredicted RBP11□□□□□ -0.65
PTCD1-201ENST00000292478 UBE2V2Q15819 145 aa11□□□□□ -0.65
PTCD1-201ENST00000292478 C16orf82Q7Z2V1 217 aa11□□□□□ -0.65
PTCD1-201ENST00000292478 GPR146Q96CH1 333 aa11□□□□□ -0.65
PTCD1-201ENST00000292478 SNRNP40Q96DI7 357 aaKnown RBP11□□□□□ -0.65
PTCD1-201ENST00000292478 VPS25Q9BRG1 176 aa11□□□□□ -0.65
PTCD1-201ENST00000292478 C5orf66Q9H5L9 145 aa11□□□□□ -0.65
PTCD1-201ENST00000292478 APCSP02743 223 aa11□□□□□ -0.65
PTCD1-201ENST00000292478 ADRA2AP08913 450 aa11□□□□□ -0.65
PTCD1-201ENST00000292478 TMPRSS3P57727 454 aa11□□□□□ -0.65
PTCD1-201ENST00000292478 RNF151Q2KHN1 245 aa11□□□□□ -0.65
PTCD1-201ENST00000292478 PPP1R32Q7Z5V6 425 aa11□□□□□ -0.65
PTCD1-201ENST00000292478 HSPB8Q9UJY1 196 aa11□□□□□ -0.65
PTCD1-201ENST00000292478 CBY1Q9Y3M2 126 aa11□□□□□ -0.65
PTCD1-201ENST00000292478 OR10J1P30954 320 aa11□□□□□ -0.65
PTCD1-201ENST00000292478 CCL8P80075 99 aa11□□□□□ -0.65
PTCD1-201ENST00000292478 FGFRL1Q8N441 504 aa11□□□□□ -0.65
PTCD1-201ENST00000292478 APCDD1LQ8NCL9 501 aa11□□□□□ -0.65
PTCD1-201ENST00000292478 MS4A3Q96HJ5 214 aa11□□□□□ -0.65
PTCD1-201ENST00000292478 SCNM1Q9BWG6 230 aa11□□□□□ -0.65
PTCD1-201ENST00000292478 FUT9Q9Y231 359 aa11□□□□□ -0.65
PTCD1-201ENST00000292478 CEACAM18A8MTB9 384 aa11□□□□□ -0.65
PTCD1-201ENST00000292478 TCAPO15273 167 aa11□□□□□ -0.65
PTCD1-201ENST00000292478 OR2A4O95047 310 aa11□□□□□ -0.65
PTCD1-201ENST00000292478 MT-ND6P03923 174 aa11□□□□□ -0.65
PTCD1-201ENST00000292478 HIST3H3Q16695 136 aa11□□□□□ -0.65
PTCD1-201ENST00000292478 WDFY1Q8IWB7 410 aa11□□□□□ -0.65
PTCD1-201ENST00000292478 OR2A7Q96R45 310 aa11□□□□□ -0.65
PTCD1-201ENST00000292478 CALYQ9NYX4 217 aa11□□□□□ -0.65
PTCD1-201ENST00000292478 M0QZK8 103 aa10.99□□□□□ -0.65
PTCD1-201ENST00000292478 GGCTO75223 188 aaKnown RBP10.99□□□□□ -0.65
PTCD1-201ENST00000292478 HIST1H1BP16401 226 aaKnown RBP10.99□□□□□ -0.65
PTCD1-201ENST00000292478 ID1P41134 155 aa10.99□□□□□ -0.65
PTCD1-201ENST00000292478 TCL1AP56279 114 aa10.99□□□□□ -0.65
PTCD1-201ENST00000292478 GAMTQ14353 236 aa10.99□□□□□ -0.65
PTCD1-201ENST00000292478 TMEM116Q8NCL8 245 aa10.99□□□□□ -0.65
PTCD1-201ENST00000292478 TAF15Q92804 592 aaKnown RBP eCLIP10.99□□□□□ -0.65
PTCD1-201ENST00000292478 SRD5A3Q9H8P0 318 aa10.99□□□□□ -0.65
PTCD1-201ENST00000292478 RPL8P62917 257 aaKnown RBP10.99□□□□□ -0.65
PTCD1-201ENST00000292478 LBHQ53QV2 105 aaPredicted RBP10.99□□□□□ -0.65
PTCD1-201ENST00000292478 NCMAPQ5T1S8 102 aa10.99□□□□□ -0.65
PTCD1-201ENST00000292478 KLF14Q8TD94 323 aaPredicted RBP10.99□□□□□ -0.65
PTCD1-201ENST00000292478 NINQ8N4C6 2090 aa10.99□□□□□ -0.65
PTCD1-201ENST00000292478 ZNF236Q9UL36 1845 aa10.99□□□□□ -0.65
PTCD1-201ENST00000292478 G0S2P27469 103 aa10.99□□□□□ -0.65
PTCD1-201ENST00000292478 ZNF658BQ4V348 819 aaPredicted RBP10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms