RNA–Protein interactions for RNA: ENST00000290460.7

SCUBE1-201, Transcript of signal peptide, CUB domain and EGF like domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene SCUBE1, Length 2,258 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE1-201ENST00000290460 FGF8P55075 233 aaPredicted RBP16.75■□□□□ 0.27
SCUBE1-201ENST00000290460 ZNF816Q0VGE8 651 aaPredicted RBP16.75■□□□□ 0.27
SCUBE1-201ENST00000290460 ZNF726P1Q15940 193 aa16.75■□□□□ 0.27
SCUBE1-201ENST00000290460 FIP1L1Q6UN15 594 aaKnown RBP16.75■□□□□ 0.27
SCUBE1-201ENST00000290460 LCN15Q6UWW0 184 aa16.75■□□□□ 0.27
SCUBE1-201ENST00000290460 ZNF429Q86V71 674 aa16.75■□□□□ 0.27
SCUBE1-201ENST00000290460 MRGPRDQ8TDS7 321 aa16.75■□□□□ 0.27
SCUBE1-201ENST00000290460 RBMXL1Q96E39 390 aaKnown RBP16.75■□□□□ 0.27
SCUBE1-201ENST00000290460 COQ2Q96H96 371 aa16.75■□□□□ 0.27
SCUBE1-201ENST00000290460 METRNQ9UJH8 293 aa16.75■□□□□ 0.27
SCUBE1-201ENST00000290460 HBZP02008 142 aa16.75■□□□□ 0.27
SCUBE1-201ENST00000290460 HSPB1P04792 205 aaKnown RBP16.75■□□□□ 0.27
SCUBE1-201ENST00000290460 IL2RGP31785 369 aa16.75■□□□□ 0.27
SCUBE1-201ENST00000290460 G6PCP35575 357 aa16.75■□□□□ 0.27
SCUBE1-201ENST00000290460 MEOX2P50222 304 aa16.75■□□□□ 0.27
SCUBE1-201ENST00000290460 BTNL3Q6UXE8 466 aa16.75■□□□□ 0.27
SCUBE1-201ENST00000290460 DPPA3Q6W0C5 159 aa16.75■□□□□ 0.27
SCUBE1-201ENST00000290460 ZNF645Q8N7E2 425 aa16.75■□□□□ 0.27
SCUBE1-201ENST00000290460 ZNF665Q9H7R5 613 aa16.75■□□□□ 0.27
SCUBE1-201ENST00000290460 ZFP92A6NM28 416 aa16.74■□□□□ 0.27
SCUBE1-201ENST00000290460 PTBP3O95758 552 aaKnown RBP16.74■□□□□ 0.27
SCUBE1-201ENST00000290460 HBE1P02100 147 aa16.74■□□□□ 0.27
SCUBE1-201ENST00000290460 ACAA1P09110 424 aaPredicted RBP16.74■□□□□ 0.27
SCUBE1-201ENST00000290460 TAGLN2P37802 199 aaKnown RBP16.74■□□□□ 0.27
SCUBE1-201ENST00000290460 CD200P41217 278 aa16.74■□□□□ 0.27
SCUBE1-201ENST00000290460 GABRA2P47869 451 aa16.74■□□□□ 0.27
SCUBE1-201ENST00000290460 UBE2KP61086 200 aa16.74■□□□□ 0.27
SCUBE1-201ENST00000290460 RBMS3Q6XE24 437 aaKnown RBP16.74■□□□□ 0.27
SCUBE1-201ENST00000290460 UNKLQ9H9P5 680 aaKnown RBP16.74■□□□□ 0.27
SCUBE1-201ENST00000290460 TIMM8AO60220 97 aaPredicted RBP16.73■□□□□ 0.27
SCUBE1-201ENST00000290460 CECR9P0C854 216 aa16.73■□□□□ 0.27
SCUBE1-201ENST00000290460 LINC00205P59089 165 aa16.73■□□□□ 0.27
SCUBE1-201ENST00000290460 RAB2AP61019 212 aa16.73■□□□□ 0.27
SCUBE1-201ENST00000290460 DLK1P80370 383 aa16.73■□□□□ 0.27
SCUBE1-201ENST00000290460 OR8G2PQ6IF36 304 aa16.73■□□□□ 0.27
SCUBE1-201ENST00000290460 WDR82Q6UXN9 313 aa16.73■□□□□ 0.27
SCUBE1-201ENST00000290460 ACP7Q6ZNF0 438 aa16.73■□□□□ 0.27
SCUBE1-201ENST00000290460 YPEL4Q96NS1 127 aa16.73■□□□□ 0.27
SCUBE1-201ENST00000290460 SPAARA0A1B0GVQ0 90 aa16.73■□□□□ 0.27
SCUBE1-201ENST00000290460 C1QTNF9BB2RNN3 333 aa16.73■□□□□ 0.27
SCUBE1-201ENST00000290460 SSTR5P35346 364 aa16.73■□□□□ 0.27
SCUBE1-201ENST00000290460 DEFB124Q8NES8 71 aa16.73■□□□□ 0.27
SCUBE1-201ENST00000290460 OR4C12Q96R67 309 aa16.73■□□□□ 0.27
SCUBE1-201ENST00000290460 MMP24Q9Y5R2 645 aa16.73■□□□□ 0.27
SCUBE1-201ENST00000290460 IGHV3-43A0A0B4J1X8 118 aa16.72■□□□□ 0.27
SCUBE1-201ENST00000290460 UBE2L5PA0A1B0GUS4 154 aa16.72■□□□□ 0.27
SCUBE1-201ENST00000290460 LOC102723971A0A1B0GUV8 181 aa16.72■□□□□ 0.27
SCUBE1-201ENST00000290460 CLDN1O95832 211 aa16.72■□□□□ 0.27
SCUBE1-201ENST00000290460 IGHV3-43DP0DP04 118 aa16.72■□□□□ 0.27
SCUBE1-201ENST00000290460 COX5AP20674 150 aa16.72■□□□□ 0.27
SCUBE1-201ENST00000290460 GLIPR1P48060 266 aa16.72■□□□□ 0.27
SCUBE1-201ENST00000290460 ELLP55199 621 aaPredicted RBP16.72■□□□□ 0.27
SCUBE1-201ENST00000290460 HBG1P69891 147 aa16.72■□□□□ 0.27
SCUBE1-201ENST00000290460 HBG2P69892 147 aa16.72■□□□□ 0.27
SCUBE1-201ENST00000290460 ZNF343Q6P1L6 599 aa16.72■□□□□ 0.27
SCUBE1-201ENST00000290460 MUCL1Q96DR8 90 aa16.72■□□□□ 0.27
SCUBE1-201ENST00000290460 HIPK2Q9H2X6 1198 aa16.72■□□□□ 0.27
SCUBE1-201ENST00000290460 RBKSQ9H477 322 aa16.72■□□□□ 0.27
SCUBE1-201ENST00000290460 ICE1Q9Y2F5 2266 aa16.72■□□□□ 0.27
SCUBE1-201ENST00000290460 PTPRBP23467 1997 aa16.72■□□□□ 0.27
SCUBE1-201ENST00000290460 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP16.72■□□□□ 0.27
SCUBE1-201ENST00000290460 RNF212BA8MTL3 300 aa16.72■□□□□ 0.27
SCUBE1-201ENST00000290460 S1PR2O95136 353 aa16.72■□□□□ 0.27
SCUBE1-201ENST00000290460 BRWD1-AS2P59051 145 aa16.72■□□□□ 0.27
SCUBE1-201ENST00000290460 TNFRSF9Q07011 255 aa16.72■□□□□ 0.27
SCUBE1-201ENST00000290460 FABP9Q0Z7S8 132 aa16.72■□□□□ 0.27
SCUBE1-201ENST00000290460 LRRC75BQ2VPJ9 315 aa16.72■□□□□ 0.27
SCUBE1-201ENST00000290460 ZNF787Q6DD87 383 aa16.72■□□□□ 0.27
SCUBE1-201ENST00000290460 RFESDQ8TAC1 157 aa16.72■□□□□ 0.27
SCUBE1-201ENST00000290460 RCC1LQ96I51 464 aaKnown RBP16.72■□□□□ 0.27
SCUBE1-201ENST00000290460 CXXC4Q9H2H0 198 aa16.72■□□□□ 0.27
SCUBE1-201ENST00000290460 URGCP-MRPS24S4R325 110 aa16.72■□□□□ 0.27
SCUBE1-201ENST00000290460 TRAV1-1A0A0B4J248 108 aa16.71■□□□□ 0.27
SCUBE1-201ENST00000290460 OOEPA6NGQ2 149 aa16.71■□□□□ 0.27
SCUBE1-201ENST00000290460 C17orf98A8MV24 154 aa16.71■□□□□ 0.27
SCUBE1-201ENST00000290460 UBE2CO00762 179 aa16.71■□□□□ 0.27
SCUBE1-201ENST00000290460 KHDC3LQ587J8 217 aa16.71■□□□□ 0.27
SCUBE1-201ENST00000290460 SLC35E4Q6ICL7 350 aa16.71■□□□□ 0.27
SCUBE1-201ENST00000290460 NIPSNAP3BQ9BS92 247 aa16.71■□□□□ 0.27
SCUBE1-201ENST00000290460 WDR61Q9GZS3 305 aaKnown RBP16.71■□□□□ 0.27
SCUBE1-201ENST00000290460 DEFB108AA8MXU0 73 aa16.71■□□□□ 0.27
SCUBE1-201ENST00000290460 CD55P08174 381 aa16.71■□□□□ 0.27
SCUBE1-201ENST00000290460 RAB11AP62491 216 aa16.71■□□□□ 0.27
SCUBE1-201ENST00000290460 COL10A1Q03692 680 aa16.71■□□□□ 0.27
SCUBE1-201ENST00000290460 SLC38A11Q08AI6 406 aa16.71■□□□□ 0.27
SCUBE1-201ENST00000290460 HEPN1Q6WQI6 88 aa16.71■□□□□ 0.27
SCUBE1-201ENST00000290460 OR13A1Q8NGR1 328 aa16.71■□□□□ 0.27
SCUBE1-201ENST00000290460 NINJ1Q92982 152 aa16.71■□□□□ 0.27
SCUBE1-201ENST00000290460 DCTN5Q9BTE1 182 aa16.71■□□□□ 0.27
SCUBE1-201ENST00000290460 CLN8Q9UBY8 286 aa16.71■□□□□ 0.27
SCUBE1-201ENST00000290460 RP1L1Q8IWN7 2480 aaPredicted RBP16.7■□□□□ 0.26
SCUBE1-201ENST00000290460 PPIHO43447 177 aaKnown RBP16.7■□□□□ 0.26
SCUBE1-201ENST00000290460 RPS16P62249 146 aaKnown RBP16.7■□□□□ 0.26
SCUBE1-201ENST00000290460 EIF4EBP1Q13541 118 aaPredicted RBP16.7■□□□□ 0.26
SCUBE1-201ENST00000290460 TCTEX1D2Q8WW35 142 aa16.7■□□□□ 0.26
SCUBE1-201ENST00000290460 PSMG3Q9BT73 122 aaPredicted RBP16.7■□□□□ 0.26
SCUBE1-201ENST00000290460 OPN3Q9H1Y3 402 aaPredicted RBP16.7■□□□□ 0.26
SCUBE1-201ENST00000290460 HCFC1P51610 2035 aa16.7■□□□□ 0.26
SCUBE1-201ENST00000290460 MGAQ8IWI9 3026 aa16.7■□□□□ 0.26
SCUBE1-201ENST00000290460 ODAMA1E959 279 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms