RNA–Protein interactions for RNA: ENST00000290178.4

PAXBP1-201, Transcript of PAX3 and PAX7 binding protein 1, humanhuman

TSL 1 (best) BASIC

Gene PAXBP1, Length 2,564 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAXBP1-201ENST00000290178 SNIP1Q8TAD8 396 aaKnown RBP18.21■□□□□ 0.51
PAXBP1-201ENST00000290178 COQ2Q96H96 371 aa18.21■□□□□ 0.51
PAXBP1-201ENST00000290178 ZNF665Q9H7R5 613 aa18.21■□□□□ 0.51
PAXBP1-201ENST00000290178 IGHV3-43A0A0B4J1X8 118 aa18.21■□□□□ 0.51
PAXBP1-201ENST00000290178 TMEM30CPA0ZSE6 113 aa18.21■□□□□ 0.51
PAXBP1-201ENST00000290178 PTBP3O95758 552 aaKnown RBP18.21■□□□□ 0.51
PAXBP1-201ENST00000290178 IGHG3P01860 377 aa18.21■□□□□ 0.51
PAXBP1-201ENST00000290178 IGHV3-43DP0DP04 118 aa18.21■□□□□ 0.51
PAXBP1-201ENST00000290178 OR4C12Q96R67 309 aa18.21■□□□□ 0.51
PAXBP1-201ENST00000290178 HSPB1P04792 205 aaKnown RBP18.2■□□□□ 0.5
PAXBP1-201ENST00000290178 CD55P08174 381 aa18.2■□□□□ 0.5
PAXBP1-201ENST00000290178 GABRA2P47869 451 aa18.2■□□□□ 0.5
PAXBP1-201ENST00000290178 RPS16P62249 146 aaKnown RBP18.2■□□□□ 0.5
PAXBP1-201ENST00000290178 FABP9Q0Z7S8 132 aa18.2■□□□□ 0.5
PAXBP1-201ENST00000290178 GUSBP1Q15486 140 aa18.2■□□□□ 0.5
PAXBP1-201ENST00000290178 RFESDQ8TAC1 157 aa18.2■□□□□ 0.5
PAXBP1-201ENST00000290178 RBMXL1Q96E39 390 aaKnown RBP18.2■□□□□ 0.5
PAXBP1-201ENST00000290178 YPEL4Q96NS1 127 aa18.2■□□□□ 0.5
PAXBP1-201ENST00000290178 URGCP-MRPS24S4R325 110 aa18.2■□□□□ 0.5
PAXBP1-201ENST00000290178 SPAARA0A1B0GVQ0 90 aa18.2■□□□□ 0.5
PAXBP1-201ENST00000290178 IGKV3-15P01624 115 aa18.2■□□□□ 0.5
PAXBP1-201ENST00000290178 GLIPR1P48060 266 aa18.2■□□□□ 0.5
PAXBP1-201ENST00000290178 BRWD1-AS2P59051 145 aa18.2■□□□□ 0.5
PAXBP1-201ENST00000290178 ZNF645Q8N7E2 425 aa18.2■□□□□ 0.5
PAXBP1-201ENST00000290178 RBKSQ9H477 322 aa18.2■□□□□ 0.5
PAXBP1-201ENST00000290178 TMEM210A6NLX4 147 aa18.19■□□□□ 0.5
PAXBP1-201ENST00000290178 DEFB108AA8MXU0 73 aa18.19■□□□□ 0.5
PAXBP1-201ENST00000290178 TIMM8AO60220 97 aaPredicted RBP18.19■□□□□ 0.5
PAXBP1-201ENST00000290178 HBE1P02100 147 aa18.19■□□□□ 0.5
PAXBP1-201ENST00000290178 CECR9P0C854 216 aa18.19■□□□□ 0.5
PAXBP1-201ENST00000290178 SSTR5P35346 364 aa18.19■□□□□ 0.5
PAXBP1-201ENST00000290178 ELLP55199 621 aaPredicted RBP18.19■□□□□ 0.5
PAXBP1-201ENST00000290178 WDR82Q6UXN9 313 aa18.19■□□□□ 0.5
PAXBP1-201ENST00000290178 DEFB124Q8NES8 71 aa18.19■□□□□ 0.5
PAXBP1-201ENST00000290178 MUCL1Q96DR8 90 aa18.19■□□□□ 0.5
PAXBP1-201ENST00000290178 DCTN5Q9BTE1 182 aa18.19■□□□□ 0.5
PAXBP1-201ENST00000290178 USF3Q68DE3 2245 aa18.19■□□□□ 0.5
PAXBP1-201ENST00000290178 EP300Q09472 2414 aaPredicted RBP18.19■□□□□ 0.5
PAXBP1-201ENST00000290178 LOC102723971A0A1B0GUV8 181 aa18.19■□□□□ 0.5
PAXBP1-201ENST00000290178 C17orf98A8MV24 154 aa18.19■□□□□ 0.5
PAXBP1-201ENST00000290178 CLDN1O95832 211 aa18.19■□□□□ 0.5
PAXBP1-201ENST00000290178 NQO2P16083 231 aa18.19■□□□□ 0.5
PAXBP1-201ENST00000290178 HOXC12P31275 282 aa18.19■□□□□ 0.5
PAXBP1-201ENST00000290178 CD200P41217 278 aa18.19■□□□□ 0.5
PAXBP1-201ENST00000290178 RAB2AP61019 212 aa18.19■□□□□ 0.5
PAXBP1-201ENST00000290178 LRRC75BQ2VPJ9 315 aa18.19■□□□□ 0.5
PAXBP1-201ENST00000290178 ALKBH2Q6NS38 261 aa18.19■□□□□ 0.5
PAXBP1-201ENST00000290178 DPPA3Q6W0C5 159 aa18.19■□□□□ 0.5
PAXBP1-201ENST00000290178 ACP7Q6ZNF0 438 aa18.19■□□□□ 0.5
PAXBP1-201ENST00000290178 UNKLQ9H9P5 680 aaKnown RBP18.19■□□□□ 0.5
PAXBP1-201ENST00000290178 ZNF787Q6DD87 383 aa18.18■□□□□ 0.5
PAXBP1-201ENST00000290178 FIP1L1Q6UN15 594 aaKnown RBP18.18■□□□□ 0.5
PAXBP1-201ENST00000290178 CHD3Q12873 2000 aaKnown RBP18.18■□□□□ 0.5
PAXBP1-201ENST00000290178 PIGBOS1A0A0B4J2F0 54 aa18.18■□□□□ 0.5
PAXBP1-201ENST00000290178 UBE2L5PA0A1B0GUS4 154 aa18.18■□□□□ 0.5
PAXBP1-201ENST00000290178 S1PR2O95136 353 aa18.18■□□□□ 0.5
PAXBP1-201ENST00000290178 RAB11AP62491 216 aa18.18■□□□□ 0.5
PAXBP1-201ENST00000290178 SLC16A13Q7RTY0 426 aa18.18■□□□□ 0.5
PAXBP1-201ENST00000290178 PLPPR2Q96GM1 343 aa18.18■□□□□ 0.5
PAXBP1-201ENST00000290178 CLN8Q9UBY8 286 aa18.18■□□□□ 0.5
PAXBP1-201ENST00000290178 SVILO95425 2214 aa18.18■□□□□ 0.5
PAXBP1-201ENST00000290178 OR5H1A6NKK0 313 aa18.17■□□□□ 0.5
PAXBP1-201ENST00000290178 C1QTNF9BB2RNN3 333 aa18.17■□□□□ 0.5
PAXBP1-201ENST00000290178 UBE2CO00762 179 aa18.17■□□□□ 0.5
PAXBP1-201ENST00000290178 HBG1P69891 147 aa18.17■□□□□ 0.5
PAXBP1-201ENST00000290178 HBG2P69892 147 aa18.17■□□□□ 0.5
PAXBP1-201ENST00000290178 COL10A1Q03692 680 aa18.17■□□□□ 0.5
PAXBP1-201ENST00000290178 TNFRSF9Q07011 255 aa18.17■□□□□ 0.5
PAXBP1-201ENST00000290178 KHDC3LQ587J8 217 aa18.17■□□□□ 0.5
PAXBP1-201ENST00000290178 HEPN1Q6WQI6 88 aa18.17■□□□□ 0.5
PAXBP1-201ENST00000290178 RCC1LQ96I51 464 aaKnown RBP18.17■□□□□ 0.5
PAXBP1-201ENST00000290178 NIPSNAP3BQ9BS92 247 aa18.17■□□□□ 0.5
PAXBP1-201ENST00000290178 WDR61Q9GZS3 305 aaKnown RBP18.17■□□□□ 0.5
PAXBP1-201ENST00000290178 CXXC4Q9H2H0 198 aa18.17■□□□□ 0.5
PAXBP1-201ENST00000290178 CACNA1HO95180 2353 aa18.17■□□□□ 0.5
PAXBP1-201ENST00000290178 OOEPA6NGQ2 149 aa18.17■□□□□ 0.5
PAXBP1-201ENST00000290178 TLE1Q04724 770 aa18.17■□□□□ 0.5
PAXBP1-201ENST00000290178 LTC4SQ16873 150 aa18.17■□□□□ 0.5
PAXBP1-201ENST00000290178 SPINK9Q5DT21 86 aa18.17■□□□□ 0.5
PAXBP1-201ENST00000290178 OR13A1Q8NGR1 328 aa18.17■□□□□ 0.5
PAXBP1-201ENST00000290178 TVP23CQ96ET8 276 aa18.17■□□□□ 0.5
PAXBP1-201ENST00000290178 DMXL1Q9Y485 3027 aa18.16■□□□□ 0.5
PAXBP1-201ENST00000290178 RPS10P46783 165 aaKnown RBP18.16■□□□□ 0.5
PAXBP1-201ENST00000290178 SLC38A11Q08AI6 406 aa18.16■□□□□ 0.5
PAXBP1-201ENST00000290178 SLC35E4Q6ICL7 350 aa18.16■□□□□ 0.5
PAXBP1-201ENST00000290178 BEND4Q6ZU67 534 aa18.16■□□□□ 0.5
PAXBP1-201ENST00000290178 ZNF610Q8N9Z0 462 aa18.16■□□□□ 0.5
PAXBP1-201ENST00000290178 TCTEX1D2Q8WW35 142 aa18.16■□□□□ 0.5
PAXBP1-201ENST00000290178 OPN3Q9H1Y3 402 aaPredicted RBP18.16■□□□□ 0.5
PAXBP1-201ENST00000290178 DOCK11Q5JSL3 2073 aa18.16■□□□□ 0.5
PAXBP1-201ENST00000290178 TRAV1-1A0A0B4J248 108 aa18.16■□□□□ 0.5
PAXBP1-201ENST00000290178 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP18.16■□□□□ 0.5
PAXBP1-201ENST00000290178 RNF212BA8MTL3 300 aa18.16■□□□□ 0.5
PAXBP1-201ENST00000290178 CXCL1P09341 107 aa18.16■□□□□ 0.5
PAXBP1-201ENST00000290178 HIPK2Q9H2X6 1198 aa18.16■□□□□ 0.5
PAXBP1-201ENST00000290178 ODAMA1E959 279 aa18.15■□□□□ 0.5
PAXBP1-201ENST00000290178 HMGB3O15347 200 aaKnown RBP18.15■□□□□ 0.5
PAXBP1-201ENST00000290178 COX5AP20674 150 aa18.15■□□□□ 0.5
PAXBP1-201ENST00000290178 EIF4EBP1Q13541 118 aaPredicted RBP18.15■□□□□ 0.5
PAXBP1-201ENST00000290178 NANPQ8TBE9 248 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms