RNA–Protein interactions for RNA: ENST00000283415.3

LPCAT1-201, Transcript of lysophosphatidylcholine acyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LPCAT1, Length 3,966 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT1-201ENST00000283415 DCTN5Q9BTE1 182 aa11.74□□□□□ -0.53
LPCAT1-201ENST00000283415 GNG10P50151 68 aa11.74□□□□□ -0.53
LPCAT1-201ENST00000283415 TMEM41BQ5BJD5 291 aa11.74□□□□□ -0.53
LPCAT1-201ENST00000283415 FAM185AQ8N0U4 392 aa11.74□□□□□ -0.53
LPCAT1-201ENST00000283415 Q8NFD4 153 aa11.74□□□□□ -0.53
LPCAT1-201ENST00000283415 H1FXQ92522 213 aaKnown RBP11.74□□□□□ -0.53
LPCAT1-201ENST00000283415 MUC3AQ02505 3323 aa11.73□□□□□ -0.53
LPCAT1-201ENST00000283415 TMEM265A0A087WTH1 108 aa11.73□□□□□ -0.53
LPCAT1-201ENST00000283415 ZNF716A6NP11 495 aa11.73□□□□□ -0.53
LPCAT1-201ENST00000283415 SP5Q6BEB4 398 aaPredicted RBP11.73□□□□□ -0.53
LPCAT1-201ENST00000283415 OR52L2PQ8NGH6 319 aa11.73□□□□□ -0.53
LPCAT1-201ENST00000283415 C11orf1Q9H5F2 150 aa11.73□□□□□ -0.53
LPCAT1-201ENST00000283415 CRIM1Q9NZV1 1036 aa11.73□□□□□ -0.53
LPCAT1-201ENST00000283415 hCG_38984A0A1B0GV85 526 aa11.73□□□□□ -0.53
LPCAT1-201ENST00000283415 DNPH1O43598 174 aa11.73□□□□□ -0.53
LPCAT1-201ENST00000283415 FGF7P21781 194 aa11.73□□□□□ -0.53
LPCAT1-201ENST00000283415 PRAMEF5Q5TYX0 476 aa11.73□□□□□ -0.53
LPCAT1-201ENST00000283415 CLDN34H7C241 214 aa11.73□□□□□ -0.53
LPCAT1-201ENST00000283415 GAPDHP04406 335 aaKnown RBP11.73□□□□□ -0.53
LPCAT1-201ENST00000283415 FAM201AQ5SY85 155 aa11.73□□□□□ -0.53
LPCAT1-201ENST00000283415 LRTM2Q8N967 370 aa11.73□□□□□ -0.53
LPCAT1-201ENST00000283415 SAMD10Q9BYL1 202 aa11.73□□□□□ -0.53
LPCAT1-201ENST00000283415 CLN8Q9UBY8 286 aa11.73□□□□□ -0.53
LPCAT1-201ENST00000283415 ZNF320A2RRD8 509 aa11.72□□□□□ -0.53
LPCAT1-201ENST00000283415 AQP7O14520 342 aa11.72□□□□□ -0.53
LPCAT1-201ENST00000283415 ST8SIA5O15466 376 aa11.72□□□□□ -0.53
LPCAT1-201ENST00000283415 KLK10O43240 276 aa11.72□□□□□ -0.53
LPCAT1-201ENST00000283415 FCGR3BO75015 233 aa11.72□□□□□ -0.53
LPCAT1-201ENST00000283415 ZNF737O75373 536 aa11.72□□□□□ -0.53
LPCAT1-201ENST00000283415 PMELP40967 661 aa11.72□□□□□ -0.53
LPCAT1-201ENST00000283415 GGNQ86UU5 652 aa11.72□□□□□ -0.53
LPCAT1-201ENST00000283415 WFDC8Q8IUA0 241 aa11.72□□□□□ -0.53
LPCAT1-201ENST00000283415 IL36GQ9NZH8 169 aa11.72□□□□□ -0.53
LPCAT1-201ENST00000283415 POLDIP2Q9Y2S7 368 aa11.72□□□□□ -0.53
LPCAT1-201ENST00000283415 RPL36A-HNRNPH2H7BZ11 118 aa11.72□□□□□ -0.53
LPCAT1-201ENST00000283415 SYNGR2O43760 224 aa11.72□□□□□ -0.53
LPCAT1-201ENST00000283415 LINC00205P59089 165 aa11.72□□□□□ -0.53
LPCAT1-201ENST00000283415 SLC38A11Q08AI6 406 aa11.72□□□□□ -0.53
LPCAT1-201ENST00000283415 FAM53AQ6NSI3 398 aaPredicted RBP11.72□□□□□ -0.53
LPCAT1-201ENST00000283415 GALMQ96C23 342 aa11.72□□□□□ -0.53
LPCAT1-201ENST00000283415 RPS23P62266 143 aaKnown RBP11.72□□□□□ -0.53
LPCAT1-201ENST00000283415 FBXW9Q5XUX1 488 aa11.72□□□□□ -0.53
LPCAT1-201ENST00000283415 OR1L1Q8NH94 360 aa11.72□□□□□ -0.53
LPCAT1-201ENST00000283415 LURAP1Q96LR2 239 aa11.72□□□□□ -0.53
LPCAT1-201ENST00000283415 RPH3ALQ9UNE2 315 aa11.72□□□□□ -0.53
LPCAT1-201ENST00000283415 TP53TG5Q9Y2B4 290 aa11.72□□□□□ -0.53
LPCAT1-201ENST00000283415 CHD8Q9HCK8 2581 aa11.71□□□□□ -0.53
LPCAT1-201ENST00000283415 NEURL1O76050 574 aa11.71□□□□□ -0.53
LPCAT1-201ENST00000283415 ACTL6BO94805 426 aa11.71□□□□□ -0.53
LPCAT1-201ENST00000283415 ERVK-16P61578 105 aa11.71□□□□□ -0.53
LPCAT1-201ENST00000283415 MSMO1Q15800 293 aa11.71□□□□□ -0.53
LPCAT1-201ENST00000283415 FAM103A1Q9BTL3 118 aaKnown RBP11.71□□□□□ -0.53
LPCAT1-201ENST00000283415 GGACTQ9BVM4 153 aa11.71□□□□□ -0.53
LPCAT1-201ENST00000283415 TMEM222Q9H0R3 208 aa11.71□□□□□ -0.53
LPCAT1-201ENST00000283415 CATR1Q13166 79 aa11.71□□□□□ -0.53
LPCAT1-201ENST00000283415 OR10P1Q8NGE3 313 aa11.71□□□□□ -0.53
LPCAT1-201ENST00000283415 LRRC29Q8WV35 223 aa11.71□□□□□ -0.53
LPCAT1-201ENST00000283415 RPRMQ9NS64 109 aa11.71□□□□□ -0.53
LPCAT1-201ENST00000283415 TAAR3PQ9P1P4 343 aa11.71□□□□□ -0.53
LPCAT1-201ENST00000283415 FAM208BQ5VWN6 2430 aa11.71□□□□□ -0.53
LPCAT1-201ENST00000283415 SPTBN4Q9H254 2564 aa11.71□□□□□ -0.54
LPCAT1-201ENST00000283415 NBEAQ8NFP9 2946 aa11.71□□□□□ -0.54
LPCAT1-201ENST00000283415 YLPM1P49750 1951 aaKnown RBP11.71□□□□□ -0.54
LPCAT1-201ENST00000283415 M0R1X1 148 aa11.71□□□□□ -0.54
LPCAT1-201ENST00000283415 NDUFS6O75380 124 aaKnown RBP11.71□□□□□ -0.54
LPCAT1-201ENST00000283415 CD5P06127 495 aa11.71□□□□□ -0.54
LPCAT1-201ENST00000283415 DTYMKP23919 212 aa11.71□□□□□ -0.54
LPCAT1-201ENST00000283415 RTP5Q14D33 572 aa11.71□□□□□ -0.54
LPCAT1-201ENST00000283415 FFAR4Q5NUL3 377 aa11.71□□□□□ -0.54
LPCAT1-201ENST00000283415 GPR146Q96CH1 333 aa11.71□□□□□ -0.54
LPCAT1-201ENST00000283415 BOD1Q96IK1 185 aa11.71□□□□□ -0.54
LPCAT1-201ENST00000283415 GUCD1Q96NT3 240 aa11.71□□□□□ -0.54
LPCAT1-201ENST00000283415 OPN3Q9H1Y3 402 aaPredicted RBP11.71□□□□□ -0.54
LPCAT1-201ENST00000283415 DLL3Q9NYJ7 618 aa11.71□□□□□ -0.54
LPCAT1-201ENST00000283415 ZMAT5Q9UDW3 170 aaKnown RBP11.71□□□□□ -0.54
LPCAT1-201ENST00000283415 PMS2P11Q13670 270 aa11.7□□□□□ -0.54
LPCAT1-201ENST00000283415 CEACAM21Q3KPI0 293 aa11.7□□□□□ -0.54
LPCAT1-201ENST00000283415 ABLIM2Q6H8Q1 611 aa11.7□□□□□ -0.54
LPCAT1-201ENST00000283415 SPNS3Q6ZMD2 512 aa11.7□□□□□ -0.54
LPCAT1-201ENST00000283415 VKORC1L1Q8N0U8 176 aa11.7□□□□□ -0.54
LPCAT1-201ENST00000283415 FDCSPQ8NFU4 85 aa11.7□□□□□ -0.54
LPCAT1-201ENST00000283415 MOB3AQ96BX8 217 aa11.7□□□□□ -0.54
LPCAT1-201ENST00000283415 PACRGQ96M98 296 aaPredicted RBP11.7□□□□□ -0.54
LPCAT1-201ENST00000283415 ZNF703Q9H7S9 590 aaPredicted RBP11.7□□□□□ -0.54
LPCAT1-201ENST00000283415 PLEKHA3Q9HB20 300 aa11.7□□□□□ -0.54
LPCAT1-201ENST00000283415 MRPS18CQ9Y3D5 142 aaKnown RBP11.7□□□□□ -0.54
LPCAT1-201ENST00000283415 A0A087X0M5 115 aa11.7□□□□□ -0.54
LPCAT1-201ENST00000283415 A0A1B0GX30 115 aa11.7□□□□□ -0.54
LPCAT1-201ENST00000283415 XKRY2A2RUG3 117 aa11.7□□□□□ -0.54
LPCAT1-201ENST00000283415 OR2H2O95918 312 aa11.7□□□□□ -0.54
LPCAT1-201ENST00000283415 SLC25A6P12236 298 aa11.7□□□□□ -0.54
LPCAT1-201ENST00000283415 FAM3BP58499 235 aaPredicted RBP11.7□□□□□ -0.54
LPCAT1-201ENST00000283415 OR4A16Q8NH70 328 aa11.7□□□□□ -0.54
LPCAT1-201ENST00000283415 IER2Q9BTL4 223 aa11.7□□□□□ -0.54
LPCAT1-201ENST00000283415 FUT9Q9Y231 359 aa11.7□□□□□ -0.54
LPCAT1-201ENST00000283415 LRP5LA4QPB2 252 aa11.7□□□□□ -0.54
LPCAT1-201ENST00000283415 CTXN2P0C2S0 81 aa11.7□□□□□ -0.54
LPCAT1-201ENST00000283415 APELAP0DMC3 54 aa11.7□□□□□ -0.54
LPCAT1-201ENST00000283415 GPR12P47775 334 aa11.7□□□□□ -0.54
LPCAT1-201ENST00000283415 TMEM211Q6ICI0 200 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms