RNA–Protein interactions for RNA: ENST00000277817.10

HERC4-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,371 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-201ENST00000277817 LHX4Q969G2 390 aa2.45□□□□□ -2.02
HERC4-201ENST00000277817 APOBEC3DQ96AK3 386 aaPredicted RBP2.45□□□□□ -2.02
HERC4-201ENST00000277817 GNPNAT1Q96EK6 184 aaPredicted RBP2.45□□□□□ -2.02
HERC4-201ENST00000277817 BBC3Q96PG8 261 aaPredicted RBP2.45□□□□□ -2.02
HERC4-201ENST00000277817 TCEAL7Q9BRU2 100 aa2.45□□□□□ -2.02
HERC4-201ENST00000277817 SAMD10Q9BYL1 202 aa2.45□□□□□ -2.02
HERC4-201ENST00000277817 ZFP64Q9NPA5 681 aa2.45□□□□□ -2.02
HERC4-201ENST00000277817 PSENENQ9NZ42 101 aa2.45□□□□□ -2.02
HERC4-201ENST00000277817 CPAMD8Q8IZJ3 1885 aa2.45□□□□□ -2.02
HERC4-201ENST00000277817 TLN1Q9Y490 2541 aaKnown RBP2.45□□□□□ -2.02
HERC4-201ENST00000277817 IGHV5-10-1A0A0J9YXX1 117 aa2.45□□□□□ -2.02
HERC4-201ENST00000277817 C7orf66A4D0T2 115 aa2.45□□□□□ -2.02
HERC4-201ENST00000277817 FAM24AA6NFZ4 105 aa2.45□□□□□ -2.02
HERC4-201ENST00000277817 ZNF727A8MUV8 499 aa2.45□□□□□ -2.02
HERC4-201ENST00000277817 DEFB108AA8MXU0 73 aa2.45□□□□□ -2.02
HERC4-201ENST00000277817 GPR31O00270 319 aa2.45□□□□□ -2.02
HERC4-201ENST00000277817 ITGB1BP1O14713 200 aa2.45□□□□□ -2.02
HERC4-201ENST00000277817 GEMIN2O14893 280 aaKnown RBP2.45□□□□□ -2.02
HERC4-201ENST00000277817 PPP1R2P9O14990 202 aa2.45□□□□□ -2.02
HERC4-201ENST00000277817 HMGB3O15347 200 aaKnown RBP2.45□□□□□ -2.02
HERC4-201ENST00000277817 CYB5BO43169 146 aa2.45□□□□□ -2.02
HERC4-201ENST00000277817 SOX15O60248 233 aa2.45□□□□□ -2.02
HERC4-201ENST00000277817 LMX1BO60663 402 aa2.45□□□□□ -2.02
HERC4-201ENST00000277817 NDUFS6O75380 124 aaKnown RBP2.45□□□□□ -2.02
HERC4-201ENST00000277817 ADRA2AP08913 450 aa2.45□□□□□ -2.02
HERC4-201ENST00000277817 RD3LP0DJH9 198 aa2.45□□□□□ -2.02
HERC4-201ENST00000277817 ZP3P21754 424 aa2.45□□□□□ -2.02
HERC4-201ENST00000277817 TMEM33P57088 247 aa2.45□□□□□ -2.02
HERC4-201ENST00000277817 ZNF816Q0VGE8 651 aaPredicted RBP2.45□□□□□ -2.02
HERC4-201ENST00000277817 PRDX4Q13162 271 aa2.45□□□□□ -2.02
HERC4-201ENST00000277817 GGTLC2Q14390 218 aa2.45□□□□□ -2.02
HERC4-201ENST00000277817 MICBQ29980 383 aa2.45□□□□□ -2.02
HERC4-201ENST00000277817 DEFB109BQ30KR1 87 aa2.45□□□□□ -2.02
HERC4-201ENST00000277817 MOGAT2Q3SYC2 334 aa2.45□□□□□ -2.02
HERC4-201ENST00000277817 FHL5Q5TD97 284 aa2.45□□□□□ -2.02
HERC4-201ENST00000277817 PRAMEF5Q5TYX0 476 aa2.45□□□□□ -2.02
HERC4-201ENST00000277817 PRAMEF6Q5VXH4 476 aa2.45□□□□□ -2.02
HERC4-201ENST00000277817 FAM71F2Q6NXP2 309 aa2.45□□□□□ -2.02
HERC4-201ENST00000277817 SLC38A6Q8IZM9 456 aa2.45□□□□□ -2.02
HERC4-201ENST00000277817 SLC25A45Q8N413 288 aa2.45□□□□□ -2.02
HERC4-201ENST00000277817 ZADH2Q8N4Q0 377 aa2.45□□□□□ -2.02
HERC4-201ENST00000277817 SCCPDHQ8NBX0 429 aa2.45□□□□□ -2.02
HERC4-201ENST00000277817 ZNF485Q8NCK3 441 aa2.45□□□□□ -2.02
HERC4-201ENST00000277817 LFNGQ8NES3 379 aa2.45□□□□□ -2.02
HERC4-201ENST00000277817 OR11H4Q8NGC9 324 aa2.45□□□□□ -2.02
HERC4-201ENST00000277817 OR11L1Q8NGX0 322 aa2.45□□□□□ -2.02
HERC4-201ENST00000277817 RNF133Q8WVZ7 376 aa2.45□□□□□ -2.02
HERC4-201ENST00000277817 RPUSD4Q96CM3 377 aaKnown RBP2.45□□□□□ -2.02
HERC4-201ENST00000277817 TVP23CQ96ET8 276 aa2.45□□□□□ -2.02
HERC4-201ENST00000277817 FAM173AQ9BQD7 235 aa2.45□□□□□ -2.02
HERC4-201ENST00000277817 PECRQ9BY49 303 aa2.45□□□□□ -2.02
HERC4-201ENST00000277817 FNDC4Q9H6D8 234 aaPredicted RBP2.45□□□□□ -2.02
HERC4-201ENST00000277817 PATZ1Q9HBE1 687 aaKnown RBP2.45□□□□□ -2.02
HERC4-201ENST00000277817 YAE1D1Q9NRH1 226 aa2.45□□□□□ -2.02
HERC4-201ENST00000277817 SIGLEC8Q9NYZ4 499 aa2.45□□□□□ -2.02
HERC4-201ENST00000277817 GPR160Q9UJ42 338 aa2.45□□□□□ -2.02
HERC4-201ENST00000277817 ELF5Q9UKW6 265 aaPredicted RBP2.45□□□□□ -2.02
HERC4-201ENST00000277817 FZR1Q9UM11 496 aa2.45□□□□□ -2.02
HERC4-201ENST00000277817 R4GN57 208 aa2.45□□□□□ -2.02
HERC4-201ENST00000277817 ICE1Q9Y2F5 2266 aa2.45□□□□□ -2.02
HERC4-201ENST00000277817 DMDP11532 3685 aa2.45□□□□□ -2.02
HERC4-201ENST00000277817 FBLL1A6NHQ2 334 aaKnown RBP2.45□□□□□ -2.02
HERC4-201ENST00000277817 CFDP00746 253 aaPredicted RBP2.45□□□□□ -2.02
HERC4-201ENST00000277817 IGHV3-13P01766 116 aa2.45□□□□□ -2.02
HERC4-201ENST00000277817 IGHV3-7P01780 117 aa2.45□□□□□ -2.02
HERC4-201ENST00000277817 CRYAAP02489 173 aa2.45□□□□□ -2.02
HERC4-201ENST00000277817 TTRP02766 147 aa2.45□□□□□ -2.02
HERC4-201ENST00000277817 CELA2AP08217 269 aa2.45□□□□□ -2.02
HERC4-201ENST00000277817 OR8U8P0C7N1 319 aa2.45□□□□□ -2.02
HERC4-201ENST00000277817 CXCL2P19875 107 aa2.45□□□□□ -2.02
HERC4-201ENST00000277817 CEACAM6P40199 344 aa2.45□□□□□ -2.02
HERC4-201ENST00000277817 DEFA6Q01524 100 aa2.45□□□□□ -2.02
HERC4-201ENST00000277817 FLI1Q01543 452 aaPredicted RBP2.45□□□□□ -2.02
HERC4-201ENST00000277817 SRSF9Q13242 221 aaKnown RBP eCLIP2.45□□□□□ -2.02
HERC4-201ENST00000277817 GUK1Q16774 197 aa2.45□□□□□ -2.02
HERC4-201ENST00000277817 SLC25A42Q86VD7 318 aa2.45□□□□□ -2.02
HERC4-201ENST00000277817 ABCA7Q8IZY2 2146 aa2.45□□□□□ -2.02
HERC4-201ENST00000277817 PRR26Q8N8Z3 221 aa2.45□□□□□ -2.02
HERC4-201ENST00000277817 TMEM104Q8NE00 496 aa2.45□□□□□ -2.02
HERC4-201ENST00000277817 OR10P1Q8NGE3 313 aa2.45□□□□□ -2.02
HERC4-201ENST00000277817 OR2Y1Q8NGV0 311 aa2.45□□□□□ -2.02
HERC4-201ENST00000277817 OR4F5Q8NH21 305 aa2.45□□□□□ -2.02
HERC4-201ENST00000277817 RNF138Q8WVD3 245 aa2.45□□□□□ -2.02
HERC4-201ENST00000277817 ZNRF4Q8WWF5 429 aa2.45□□□□□ -2.02
HERC4-201ENST00000277817 ERGIC1Q969X5 290 aa2.45□□□□□ -2.02
HERC4-201ENST00000277817 GALMQ96C23 342 aa2.45□□□□□ -2.02
HERC4-201ENST00000277817 ZNF501Q96CX3 271 aaPredicted RBP2.45□□□□□ -2.02
HERC4-201ENST00000277817 SLC25A38Q96DW6 304 aa2.45□□□□□ -2.02
HERC4-201ENST00000277817 ADGRG7Q96K78 797 aa2.45□□□□□ -2.02
HERC4-201ENST00000277817 ZNF385AQ96PM9 386 aaKnown RBP2.45□□□□□ -2.02
HERC4-201ENST00000277817 UHRF2Q96PU4 802 aa2.45□□□□□ -2.02
HERC4-201ENST00000277817 OR4F4Q96R69 305 aa2.45□□□□□ -2.02
HERC4-201ENST00000277817 RIMS4Q9H426 269 aaPredicted RBP2.45□□□□□ -2.02
HERC4-201ENST00000277817 ABCA4P78363 2273 aa2.45□□□□□ -2.02
HERC4-201ENST00000277817 TRGV5A0A0B4J1U4 118 aa2.45□□□□□ -2.02
HERC4-201ENST00000277817 TRAV39A0A0B4J263 110 aa2.45□□□□□ -2.02
HERC4-201ENST00000277817 C3orf85A0A1B0GTC6 90 aa2.45□□□□□ -2.02
HERC4-201ENST00000277817 RAB19A4D1S5 217 aa2.45□□□□□ -2.02
HERC4-201ENST00000277817 TSTD3H0UI37 97 aa2.45□□□□□ -2.02
HERC4-201ENST00000277817 M0R1B8 84 aa2.45□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms