RNA–Protein interactions for RNA: ENST00000270061.11

SSBP4-201, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP4, Length 1,768 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-201ENST00000270061 MPPED1O15442 326 aa20.27■□□□□ 0.84
SSBP4-201ENST00000270061 HSPA12AO43301 675 aa20.27■□□□□ 0.84
SSBP4-201ENST00000270061 HBZP02008 142 aa20.27■□□□□ 0.84
SSBP4-201ENST00000270061 GZMHP20718 246 aa20.27■□□□□ 0.84
SSBP4-201ENST00000270061 GSG1LQ6UXU4 331 aa20.27■□□□□ 0.84
SSBP4-201ENST00000270061 ZNF818PQ6ZRF7 136 aa20.27■□□□□ 0.84
SSBP4-201ENST00000270061 LRTM2Q8N967 370 aa20.27■□□□□ 0.84
SSBP4-201ENST00000270061 OR10V1Q8NGI7 309 aa20.27■□□□□ 0.84
SSBP4-201ENST00000270061 OR13A1Q8NGR1 328 aa20.27■□□□□ 0.84
SSBP4-201ENST00000270061 MRGPRDQ8TDS7 321 aa20.27■□□□□ 0.84
SSBP4-201ENST00000270061 TRAV20A0A0B4J274 112 aa20.26■□□□□ 0.83
SSBP4-201ENST00000270061 IGHV2-70P01814 119 aa20.26■□□□□ 0.83
SSBP4-201ENST00000270061 P2RX3P56373 397 aa20.26■□□□□ 0.83
SSBP4-201ENST00000270061 FGL1Q08830 312 aa20.26■□□□□ 0.83
SSBP4-201ENST00000270061 OR1L1Q8NH94 360 aa20.26■□□□□ 0.83
SSBP4-201ENST00000270061 PDCD10Q9BUL8 212 aa20.26■□□□□ 0.83
SSBP4-201ENST00000270061 PLSCR3Q9NRY6 295 aa20.26■□□□□ 0.83
SSBP4-201ENST00000270061 RDH8Q9NYR8 311 aa20.26■□□□□ 0.83
SSBP4-201ENST00000270061 BOLA1Q9Y3E2 137 aa20.26■□□□□ 0.83
SSBP4-201ENST00000270061 SIGLEC5O15389 551 aa20.26■□□□□ 0.83
SSBP4-201ENST00000270061 CEACAM6P40199 344 aa20.26■□□□□ 0.83
SSBP4-201ENST00000270061 LUMP51884 338 aaPredicted RBP20.26■□□□□ 0.83
SSBP4-201ENST00000270061 CYCSP99999 105 aaKnown RBP20.26■□□□□ 0.83
SSBP4-201ENST00000270061 EDDM3AQ14507 147 aa20.26■□□□□ 0.83
SSBP4-201ENST00000270061 CMTM1Q8IZ96 169 aa20.26■□□□□ 0.83
SSBP4-201ENST00000270061 TPRX1Q8N7U7 411 aa20.26■□□□□ 0.83
SSBP4-201ENST00000270061 BVESQ8NE79 360 aa20.26■□□□□ 0.83
SSBP4-201ENST00000270061 DEFB108BQ8NET1 73 aa20.26■□□□□ 0.83
SSBP4-201ENST00000270061 NMES1Q9C002 83 aa20.26■□□□□ 0.83
SSBP4-201ENST00000270061 CCL28Q9NRJ3 127 aa20.26■□□□□ 0.83
SSBP4-201ENST00000270061 PRR13Q9NZ81 148 aa20.26■□□□□ 0.83
SSBP4-201ENST00000270061 PPIAL4EA0A075B759 164 aa20.25■□□□□ 0.83
SSBP4-201ENST00000270061 PPIAL4DF5H284 164 aa20.25■□□□□ 0.83
SSBP4-201ENST00000270061 C15orf65H3BRN8 121 aa20.25■□□□□ 0.83
SSBP4-201ENST00000270061 OR5AC1P0C628 307 aa20.25■□□□□ 0.83
SSBP4-201ENST00000270061 PPIAL4FP0DN26 164 aa20.25■□□□□ 0.83
SSBP4-201ENST00000270061 HTD2P86397 168 aa20.25■□□□□ 0.83
SSBP4-201ENST00000270061 OR6C3Q9NZP0 311 aa20.25■□□□□ 0.83
SSBP4-201ENST00000270061 PPIAL4AQ9Y536 164 aa20.25■□□□□ 0.83
SSBP4-201ENST00000270061 HSPB11Q9Y547 144 aa20.25■□□□□ 0.83
SSBP4-201ENST00000270061 HMSDA8MTL9 139 aa20.24■□□□□ 0.83
SSBP4-201ENST00000270061 GYPAP02724 150 aa20.24■□□□□ 0.83
SSBP4-201ENST00000270061 SRP14P37108 136 aaKnown RBP20.24■□□□□ 0.83
SSBP4-201ENST00000270061 GLYATL2Q8WU03 294 aa20.24■□□□□ 0.83
SSBP4-201ENST00000270061 ARL11Q969Q4 196 aa20.24■□□□□ 0.83
SSBP4-201ENST00000270061 SEC22AQ96IW7 307 aa20.24■□□□□ 0.83
SSBP4-201ENST00000270061 AKR1E2Q96JD6 320 aa20.24■□□□□ 0.83
SSBP4-201ENST00000270061 C3orf85A0A1B0GTC6 90 aa20.23■□□□□ 0.83
SSBP4-201ENST00000270061 C5orf51A6NDU8 294 aa20.23■□□□□ 0.83
SSBP4-201ENST00000270061 FAM25EA8MYX2 175 aa20.23■□□□□ 0.83
SSBP4-201ENST00000270061 SPINT2O43291 252 aa20.23■□□□□ 0.83
SSBP4-201ENST00000270061 WNT2P09544 360 aa20.23■□□□□ 0.83
SSBP4-201ENST00000270061 S100GP29377 79 aa20.23■□□□□ 0.83
SSBP4-201ENST00000270061 IFITM2Q01629 132 aa20.23■□□□□ 0.83
SSBP4-201ENST00000270061 TMEM155Q4W5P6 130 aa20.23■□□□□ 0.83
SSBP4-201ENST00000270061 LIAT1Q6ZQX7 453 aa20.23■□□□□ 0.83
SSBP4-201ENST00000270061 GRPEL2Q8TAA5 225 aa20.23■□□□□ 0.83
SSBP4-201ENST00000270061 CCL13Q99616 98 aa20.23■□□□□ 0.83
SSBP4-201ENST00000270061 MDFIQ99750 246 aa20.23■□□□□ 0.83
SSBP4-201ENST00000270061 NKX6-3A6NJ46 265 aa20.23■□□□□ 0.83
SSBP4-201ENST00000270061 HSD17B6O14756 317 aa20.23■□□□□ 0.83
SSBP4-201ENST00000270061 TNFRSF13BO14836 293 aaPredicted RBP20.23■□□□□ 0.83
SSBP4-201ENST00000270061 ADAP1O75689 374 aa20.23■□□□□ 0.83
SSBP4-201ENST00000270061 LGALSLQ3ZCW2 172 aaPredicted RBP20.23■□□□□ 0.83
SSBP4-201ENST00000270061 TBC1D26Q86UD7 250 aa20.23■□□□□ 0.83
SSBP4-201ENST00000270061 UBALD1Q8TB05 177 aa20.23■□□□□ 0.83
SSBP4-201ENST00000270061 TMEM246Q9BRR3 403 aa20.23■□□□□ 0.83
SSBP4-201ENST00000270061 METTL8Q9H825 291 aaKnown RBP20.23■□□□□ 0.83
SSBP4-201ENST00000270061 KIAA2026Q5HYC2 2103 aa20.23■□□□□ 0.83
SSBP4-201ENST00000270061 TRAV14DV4A0A0A6YYC5 116 aa20.22■□□□□ 0.83
SSBP4-201ENST00000270061 CGB3P0DN86 165 aa20.22■□□□□ 0.83
SSBP4-201ENST00000270061 CGB7P0DN87 165 aa20.22■□□□□ 0.83
SSBP4-201ENST00000270061 SRPXP78539 464 aa20.22■□□□□ 0.83
SSBP4-201ENST00000270061 COMMD9Q9P000 198 aa20.22■□□□□ 0.83
SSBP4-201ENST00000270061 C13orf42A0A1B0GVH6 325 aa20.21■□□□□ 0.83
SSBP4-201ENST00000270061 PGLYRP1O75594 196 aaPredicted RBP20.21■□□□□ 0.83
SSBP4-201ENST00000270061 B3GALNT1O75752 331 aa20.21■□□□□ 0.83
SSBP4-201ENST00000270061 FSTL3O95633 263 aa20.21■□□□□ 0.83
SSBP4-201ENST00000270061 SSTR5P35346 364 aa20.21■□□□□ 0.83
SSBP4-201ENST00000270061 SP6Q3SY56 376 aa20.21■□□□□ 0.83
SSBP4-201ENST00000270061 LGI3Q8N145 548 aa20.21■□□□□ 0.83
SSBP4-201ENST00000270061 PPP1R1CQ8WVI7 109 aa20.21■□□□□ 0.83
SSBP4-201ENST00000270061 C2orf50Q96LR7 162 aa20.21■□□□□ 0.83
SSBP4-201ENST00000270061 DCTN5Q9BTE1 182 aa20.21■□□□□ 0.83
SSBP4-201ENST00000270061 GON7Q9BXV9 100 aa20.21■□□□□ 0.83
SSBP4-201ENST00000270061 RAB9BQ9NP90 201 aa20.21■□□□□ 0.83
SSBP4-201ENST00000270061 DNHD1Q96M86 4753 aa20.21■□□□□ 0.83
SSBP4-201ENST00000270061 PHF1O43189 567 aaPredicted RBP20.21■□□□□ 0.83
SSBP4-201ENST00000270061 IGLV2-14P01704 120 aa20.21■□□□□ 0.83
SSBP4-201ENST00000270061 SELLP14151 372 aa20.21■□□□□ 0.83
SSBP4-201ENST00000270061 EDDM3BP56851 147 aa20.21■□□□□ 0.83
SSBP4-201ENST00000270061 OR52L2PQ8NGH6 319 aa20.21■□□□□ 0.83
SSBP4-201ENST00000270061 FAM216AQ8WUB2 273 aa20.21■□□□□ 0.83
SSBP4-201ENST00000270061 TP53RKQ96S44 253 aa20.21■□□□□ 0.83
SSBP4-201ENST00000270061 TMEM222Q9H0R3 208 aa20.21■□□□□ 0.83
SSBP4-201ENST00000270061 PATZ1Q9HBE1 687 aaKnown RBP20.21■□□□□ 0.83
SSBP4-201ENST00000270061 A0A1B0GW55 424 aa20.2■□□□□ 0.82
SSBP4-201ENST00000270061 F2RL2O00254 374 aa20.2■□□□□ 0.82
SSBP4-201ENST00000270061 IFNA21P01568 189 aa20.2■□□□□ 0.82
SSBP4-201ENST00000270061 HOXB5P09067 269 aa20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms