RNA–Protein interactions for RNA: ENST00000267838.6

LYSMD2-201, Transcript of LysM domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD2, Length 1,759 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2-201ENST00000267838 ODAMA1E959 279 aa17.13■□□□□ 0.33
LYSMD2-201ENST00000267838 ZG16O60844 167 aa17.13■□□□□ 0.33
LYSMD2-201ENST00000267838 DEDDO75618 318 aa17.13■□□□□ 0.33
LYSMD2-201ENST00000267838 AKR1C2P52895 323 aa17.13■□□□□ 0.33
LYSMD2-201ENST00000267838 AKR1C1Q04828 323 aa17.13■□□□□ 0.33
LYSMD2-201ENST00000267838 KIAA2026Q5HYC2 2103 aa17.13■□□□□ 0.33
LYSMD2-201ENST00000267838 LRTM2Q8N967 370 aa17.13■□□□□ 0.33
LYSMD2-201ENST00000267838 OR5D13Q8NGL4 314 aa17.13■□□□□ 0.33
LYSMD2-201ENST00000267838 MSI2Q96DH6 328 aaKnown RBP17.13■□□□□ 0.33
LYSMD2-201ENST00000267838 TP53RKQ96S44 253 aa17.13■□□□□ 0.33
LYSMD2-201ENST00000267838 PARP11Q9NR21 331 aa17.13■□□□□ 0.33
LYSMD2-201ENST00000267838 IGSF10Q6WRI0 2623 aa17.13■□□□□ 0.33
LYSMD2-201ENST00000267838 GYPAP02724 150 aa17.12■□□□□ 0.33
LYSMD2-201ENST00000267838 PVALBP20472 110 aaPredicted RBP17.12■□□□□ 0.33
LYSMD2-201ENST00000267838 SWI5Q1ZZU3 235 aa17.12■□□□□ 0.33
LYSMD2-201ENST00000267838 TMEM268Q5VZI3 342 aa17.12■□□□□ 0.33
LYSMD2-201ENST00000267838 RPL7L1Q6DKI1 246 aaKnown RBP17.12■□□□□ 0.33
LYSMD2-201ENST00000267838 C1orf87Q8N0U7 546 aa17.12■□□□□ 0.33
LYSMD2-201ENST00000267838 ITLN2Q8WWU7 325 aaPredicted RBP17.12■□□□□ 0.33
LYSMD2-201ENST00000267838 GAFA1Q96PS6 74 aa17.12■□□□□ 0.33
LYSMD2-201ENST00000267838 DCTN5Q9BTE1 182 aa17.12■□□□□ 0.33
LYSMD2-201ENST00000267838 ZNF665Q9H7R5 613 aa17.12■□□□□ 0.33
LYSMD2-201ENST00000267838 DSCAMO60469 2012 aa17.12■□□□□ 0.33
LYSMD2-201ENST00000267838 MED6O75586 246 aa17.12■□□□□ 0.33
LYSMD2-201ENST00000267838 SELLP14151 372 aa17.12■□□□□ 0.33
LYSMD2-201ENST00000267838 AGAP20933 346 aa17.12■□□□□ 0.33
LYSMD2-201ENST00000267838 S100GP29377 79 aa17.12■□□□□ 0.33
LYSMD2-201ENST00000267838 SSTR5P35346 364 aa17.12■□□□□ 0.33
LYSMD2-201ENST00000267838 HFEQ30201 348 aa17.12■□□□□ 0.33
LYSMD2-201ENST00000267838 ZNF788Q6ZQV5 615 aa17.12■□□□□ 0.33
LYSMD2-201ENST00000267838 LGI3Q8N145 548 aa17.12■□□□□ 0.33
LYSMD2-201ENST00000267838 MUC15Q8N387 334 aa17.12■□□□□ 0.33
LYSMD2-201ENST00000267838 OR52L2PQ8NGH6 319 aa17.12■□□□□ 0.33
LYSMD2-201ENST00000267838 CCL13Q99616 98 aa17.12■□□□□ 0.33
LYSMD2-201ENST00000267838 PARP12Q9H0J9 701 aaKnown RBP17.12■□□□□ 0.33
LYSMD2-201ENST00000267838 HRH4Q9H3N8 390 aa17.12■□□□□ 0.33
LYSMD2-201ENST00000267838 RBM7Q9Y580 266 aaKnown RBP17.12■□□□□ 0.33
LYSMD2-201ENST00000267838 TMEM178BH3BS89 294 aa17.11■□□□□ 0.33
LYSMD2-201ENST00000267838 PGLYRP1O75594 196 aaPredicted RBP17.11■□□□□ 0.33
LYSMD2-201ENST00000267838 F2RL1P55085 397 aa17.11■□□□□ 0.33
LYSMD2-201ENST00000267838 GGNBP1Q5YKI7 109 aa17.11■□□□□ 0.33
LYSMD2-201ENST00000267838 DUX4L9Q6RFH8 374 aaPredicted RBP17.11■□□□□ 0.33
LYSMD2-201ENST00000267838 C18orf12Q96KH6 178 aa17.11■□□□□ 0.33
LYSMD2-201ENST00000267838 GPHA2Q96T91 129 aa17.11■□□□□ 0.33
LYSMD2-201ENST00000267838 TOLLIPQ9H0E2 274 aa17.11■□□□□ 0.33
LYSMD2-201ENST00000267838 TMEM222Q9H0R3 208 aa17.11■□□□□ 0.33
LYSMD2-201ENST00000267838 TMEM106BQ9NUM4 274 aa17.11■□□□□ 0.33
LYSMD2-201ENST00000267838 TRAV38-1A0A0B4J264 116 aa17.1■□□□□ 0.33
LYSMD2-201ENST00000267838 C15orf65H3BRN8 121 aa17.1■□□□□ 0.33
LYSMD2-201ENST00000267838 SPINT2O43291 252 aa17.1■□□□□ 0.33
LYSMD2-201ENST00000267838 GZMHP20718 246 aa17.1■□□□□ 0.33
LYSMD2-201ENST00000267838 EDDM3BP56851 147 aa17.1■□□□□ 0.33
LYSMD2-201ENST00000267838 SRPXP78539 464 aa17.1■□□□□ 0.33
LYSMD2-201ENST00000267838 CR1LQ2VPA4 569 aa17.1■□□□□ 0.33
LYSMD2-201ENST00000267838 CCL17Q92583 94 aa17.1■□□□□ 0.33
LYSMD2-201ENST00000267838 NINJ1Q92982 152 aa17.1■□□□□ 0.33
LYSMD2-201ENST00000267838 FAM234AQ9H0X4 552 aa17.1■□□□□ 0.33
LYSMD2-201ENST00000267838 NCOR1P1Q9H4R4 102 aa17.1■□□□□ 0.33
LYSMD2-201ENST00000267838 FBXL17Q9UF56 701 aa17.1■□□□□ 0.33
LYSMD2-201ENST00000267838 MLXQ9UH92 298 aa17.1■□□□□ 0.33
LYSMD2-201ENST00000267838 FBXO9Q9UK97 447 aaPredicted RBP17.1■□□□□ 0.33
LYSMD2-201ENST00000267838 UBE2J1Q9Y385 318 aaPredicted RBP17.1■□□□□ 0.33
LYSMD2-201ENST00000267838 ROS1P08922 2347 aa17.1■□□□□ 0.33
LYSMD2-201ENST00000267838 KALRNO60229 2985 aa17.1■□□□□ 0.33
LYSMD2-201ENST00000267838 MEX3AA1L020 520 aaKnown RBP17.1■□□□□ 0.33
LYSMD2-201ENST00000267838 E5RGE8 158 aa17.1■□□□□ 0.33
LYSMD2-201ENST00000267838 TNFSF12O43508 249 aa17.1■□□□□ 0.33
LYSMD2-201ENST00000267838 IGLV2-14P01704 120 aa17.1■□□□□ 0.33
LYSMD2-201ENST00000267838 OR8U9P0C7N5 309 aa17.1■□□□□ 0.33
LYSMD2-201ENST00000267838 SRSF3P84103 164 aaKnown RBP17.1■□□□□ 0.33
LYSMD2-201ENST00000267838 GNMTQ14749 295 aa17.1■□□□□ 0.33
LYSMD2-201ENST00000267838 IQCF2Q8IXL9 164 aa17.1■□□□□ 0.33
LYSMD2-201ENST00000267838 OR8U1Q8NH10 309 aa17.1■□□□□ 0.33
LYSMD2-201ENST00000267838 AKR1E2Q96JD6 320 aa17.1■□□□□ 0.33
LYSMD2-201ENST00000267838 NSG2Q9Y328 171 aa17.1■□□□□ 0.33
LYSMD2-201ENST00000267838 TANC2Q9HCD6 1990 aa17.09■□□□□ 0.33
LYSMD2-201ENST00000267838 SMG1Q96Q15 3661 aaKnown RBP17.09■□□□□ 0.33
LYSMD2-201ENST00000267838 EPG5Q9HCE0 2579 aa17.09■□□□□ 0.33
LYSMD2-201ENST00000267838 PPIAL4EA0A075B759 164 aa17.09■□□□□ 0.33
LYSMD2-201ENST00000267838 PPIAL4DF5H284 164 aa17.09■□□□□ 0.33
LYSMD2-201ENST00000267838 PPIAL4FP0DN26 164 aa17.09■□□□□ 0.33
LYSMD2-201ENST00000267838 LPAR6P43657 344 aa17.09■□□□□ 0.33
LYSMD2-201ENST00000267838 BTNL8Q6UX41 500 aa17.09■□□□□ 0.33
LYSMD2-201ENST00000267838 MEX3BQ6ZN04 569 aaKnown RBP17.09■□□□□ 0.33
LYSMD2-201ENST00000267838 LYZL2Q7Z4W2 148 aa17.09■□□□□ 0.33
LYSMD2-201ENST00000267838 FOXRED2Q8IWF2 684 aa17.09■□□□□ 0.33
LYSMD2-201ENST00000267838 FAM216BQ8N7L0 139 aa17.09■□□□□ 0.33
LYSMD2-201ENST00000267838 RFESDQ8TAC1 157 aa17.09■□□□□ 0.33
LYSMD2-201ENST00000267838 C14orf79Q96F83 325 aa17.09■□□□□ 0.33
LYSMD2-201ENST00000267838 OR6C3Q9NZP0 311 aa17.09■□□□□ 0.33
LYSMD2-201ENST00000267838 KCNS2Q9ULS6 477 aa17.09■□□□□ 0.33
LYSMD2-201ENST00000267838 PPIAL4AQ9Y536 164 aa17.09■□□□□ 0.33
LYSMD2-201ENST00000267838 KLF2Q9Y5W3 355 aaPredicted RBP17.09■□□□□ 0.33
LYSMD2-201ENST00000267838 ADGRG4Q8IZF6 3080 aa17.09■□□□□ 0.33
LYSMD2-201ENST00000267838 ARFGEF3Q5TH69 2177 aa17.08■□□□□ 0.33
LYSMD2-201ENST00000267838 NKX6-3A6NJ46 265 aa17.08■□□□□ 0.33
LYSMD2-201ENST00000267838 RNASEK-C17orf49H0YIS7 233 aa17.08■□□□□ 0.33
LYSMD2-201ENST00000267838 HTD2P86397 168 aa17.08■□□□□ 0.33
LYSMD2-201ENST00000267838 COMMD1Q8N668 190 aa17.08■□□□□ 0.33
LYSMD2-201ENST00000267838 UBAC2Q8NBM4 344 aa17.08■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms