RNA–Protein interactions for RNA: ENST00000266079.4

PRPF6-201, Transcript of pre-mRNA processing factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF6, Length 3,044 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF6-201ENST00000266079 CPEB3Q8NE35 698 aaKnown RBP10.73□□□□□ -0.69
PRPF6-201ENST00000266079 OR10A7Q8NGE5 316 aa10.73□□□□□ -0.69
PRPF6-201ENST00000266079 OR1K1Q8NGR3 316 aa10.73□□□□□ -0.69
PRPF6-201ENST00000266079 TMEM171Q8WVE6 324 aa10.73□□□□□ -0.69
PRPF6-201ENST00000266079 R3HDM4Q96D70 268 aa10.73□□□□□ -0.69
PRPF6-201ENST00000266079 HIPK2Q9H2X6 1198 aa10.73□□□□□ -0.69
PRPF6-201ENST00000266079 GP6Q9HCN6 339 aa10.73□□□□□ -0.69
PRPF6-201ENST00000266079 PNRC2Q9NPJ4 139 aaKnown RBP10.73□□□□□ -0.69
PRPF6-201ENST00000266079 SLC7A11Q9UPY5 501 aa10.73□□□□□ -0.69
PRPF6-201ENST00000266079 CTSSP25774 331 aa10.73□□□□□ -0.69
PRPF6-201ENST00000266079 TLE4Q04727 773 aa10.73□□□□□ -0.69
PRPF6-201ENST00000266079 FAM57BQ71RH2 274 aa10.73□□□□□ -0.69
PRPF6-201ENST00000266079 ST6GALNAC3Q8NDV1 305 aa10.73□□□□□ -0.69
PRPF6-201ENST00000266079 GNPNAT1Q96EK6 184 aaPredicted RBP10.73□□□□□ -0.69
PRPF6-201ENST00000266079 SRD5A3Q9H8P0 318 aa10.73□□□□□ -0.69
PRPF6-201ENST00000266079 PLSCR4Q9NRQ2 329 aa10.73□□□□□ -0.69
PRPF6-201ENST00000266079 PLEKHJ1Q9NW61 149 aa10.73□□□□□ -0.69
PRPF6-201ENST00000266079 LRBAP50851 2863 aa10.72□□□□□ -0.69
PRPF6-201ENST00000266079 FAM90A27PA6NNH2 459 aa10.72□□□□□ -0.69
PRPF6-201ENST00000266079 M0R143 59 aa10.72□□□□□ -0.69
PRPF6-201ENST00000266079 MSTNO14793 375 aa10.72□□□□□ -0.69
PRPF6-201ENST00000266079 CGAP01215 116 aa10.72□□□□□ -0.69
PRPF6-201ENST00000266079 CELA3BP08861 270 aa10.72□□□□□ -0.69
PRPF6-201ENST00000266079 ZNF25P17030 456 aaPredicted RBP10.72□□□□□ -0.69
PRPF6-201ENST00000266079 CEACAM8P31997 349 aaPredicted RBP10.72□□□□□ -0.69
PRPF6-201ENST00000266079 IDH3GP51553 393 aaPredicted RBP10.72□□□□□ -0.69
PRPF6-201ENST00000266079 RAB11AP62491 216 aa10.72□□□□□ -0.69
PRPF6-201ENST00000266079 COL10A1Q03692 680 aa10.72□□□□□ -0.69
PRPF6-201ENST00000266079 PHLDA2Q53GA4 152 aa10.72□□□□□ -0.69
PRPF6-201ENST00000266079 SLC25A26Q70HW3 274 aa10.72□□□□□ -0.69
PRPF6-201ENST00000266079 RND1Q92730 232 aa10.72□□□□□ -0.69
PRPF6-201ENST00000266079 OR2H1Q9GZK4 316 aa10.72□□□□□ -0.69
PRPF6-201ENST00000266079 WNT5BQ9H1J7 359 aa10.72□□□□□ -0.69
PRPF6-201ENST00000266079 PLEKHF2Q9H8W4 249 aa10.72□□□□□ -0.69
PRPF6-201ENST00000266079 E9PLN8 166 aa10.72□□□□□ -0.69
PRPF6-201ENST00000266079 TK1P04183 234 aa10.72□□□□□ -0.69
PRPF6-201ENST00000266079 CST2P09228 141 aa10.72□□□□□ -0.69
PRPF6-201ENST00000266079 GNLYP22749 145 aa10.72□□□□□ -0.69
PRPF6-201ENST00000266079 OMGP23515 440 aa10.72□□□□□ -0.69
PRPF6-201ENST00000266079 UBE2NP61088 152 aaKnown RBP10.72□□□□□ -0.69
PRPF6-201ENST00000266079 TGFBR3Q03167 851 aa10.72□□□□□ -0.69
PRPF6-201ENST00000266079 RAB35Q15286 201 aa10.72□□□□□ -0.69
PRPF6-201ENST00000266079 KCNMB1Q16558 191 aa10.72□□□□□ -0.69
PRPF6-201ENST00000266079 ZNF880Q6PDB4 577 aa10.72□□□□□ -0.69
PRPF6-201ENST00000266079 FOXL2NBQ6ZUU3 175 aa10.72□□□□□ -0.69
PRPF6-201ENST00000266079 MYPOPQ86VE0 399 aaPredicted RBP10.72□□□□□ -0.69
PRPF6-201ENST00000266079 OR5L1Q8NGL2 311 aa10.72□□□□□ -0.69
PRPF6-201ENST00000266079 NPRL2Q8WTW4 380 aa10.72□□□□□ -0.69
PRPF6-201ENST00000266079 SLC2A9Q9NRM0 540 aa10.72□□□□□ -0.69
PRPF6-201ENST00000266079 NECAP2Q9NVZ3 263 aa10.72□□□□□ -0.69
PRPF6-201ENST00000266079 C5orf49A4QMS7 147 aa10.71□□□□□ -0.69
PRPF6-201ENST00000266079 ZNF850A8MQ14 1090 aa10.71□□□□□ -0.69
PRPF6-201ENST00000266079 FXYD4P59646 89 aa10.71□□□□□ -0.69
PRPF6-201ENST00000266079 RSPO1Q2MKA7 263 aaPredicted RBP10.71□□□□□ -0.69
PRPF6-201ENST00000266079 MDP1Q86V88 176 aa10.71□□□□□ -0.69
PRPF6-201ENST00000266079 CMTM1Q8IZ96 169 aa10.71□□□□□ -0.69
PRPF6-201ENST00000266079 BCL2L2Q92843 193 aaPredicted RBP10.71□□□□□ -0.69
PRPF6-201ENST00000266079 SYT3Q9BQG1 590 aa10.71□□□□□ -0.69
PRPF6-201ENST00000266079 CTDSP1Q9GZU7 261 aa10.71□□□□□ -0.69
PRPF6-201ENST00000266079 SDF2L1Q9HCN8 221 aa10.71□□□□□ -0.69
PRPF6-201ENST00000266079 VAX2Q9UIW0 290 aa10.71□□□□□ -0.69
PRPF6-201ENST00000266079 ZNF205O95201 554 aa10.71□□□□□ -0.69
PRPF6-201ENST00000266079 MMP7P09237 267 aaPredicted RBP10.71□□□□□ -0.69
PRPF6-201ENST00000266079 C21orf62-AS1Q17RA5 79 aa10.71□□□□□ -0.69
PRPF6-201ENST00000266079 TMEM252Q8N6L7 170 aa10.71□□□□□ -0.69
PRPF6-201ENST00000266079 SLC35G3Q8N808 338 aa10.71□□□□□ -0.69
PRPF6-201ENST00000266079 OR5C1Q8NGR4 320 aa10.71□□□□□ -0.69
PRPF6-201ENST00000266079 OR2AE1Q8NHA4 323 aa10.71□□□□□ -0.69
PRPF6-201ENST00000266079 ELL3Q9HB65 397 aaPredicted RBP10.71□□□□□ -0.69
PRPF6-201ENST00000266079 FAM221AA4D161 298 aa10.71□□□□□ -0.7
PRPF6-201ENST00000266079 M0R135 149 aa10.71□□□□□ -0.7
PRPF6-201ENST00000266079 HOXC12P31275 282 aa10.71□□□□□ -0.7
PRPF6-201ENST00000266079 CA7P43166 264 aa10.71□□□□□ -0.7
PRPF6-201ENST00000266079 CDSNQ15517 529 aa10.71□□□□□ -0.7
PRPF6-201ENST00000266079 GABRA6Q16445 453 aa10.71□□□□□ -0.7
PRPF6-201ENST00000266079 DPPA3Q6W0C5 159 aa10.71□□□□□ -0.7
PRPF6-201ENST00000266079 C22orf34Q6ZV56 151 aa10.71□□□□□ -0.7
PRPF6-201ENST00000266079 OR1F12Q8NHA8 337 aa10.71□□□□□ -0.7
PRPF6-201ENST00000266079 ZNF799Q96GE5 643 aa10.71□□□□□ -0.7
PRPF6-201ENST00000266079 HIST1H2AAQ96QV6 131 aa10.71□□□□□ -0.7
PRPF6-201ENST00000266079 XKRY2A2RUG3 117 aa10.7□□□□□ -0.7
PRPF6-201ENST00000266079 PHF1O43189 567 aaPredicted RBP10.7□□□□□ -0.7
PRPF6-201ENST00000266079 CDS2O95674 445 aa10.7□□□□□ -0.7
PRPF6-201ENST00000266079 LCATP04180 440 aa10.7□□□□□ -0.7
PRPF6-201ENST00000266079 DYNLT3P51808 116 aa10.7□□□□□ -0.7
PRPF6-201ENST00000266079 RUNX1Q01196 453 aa10.7□□□□□ -0.7
PRPF6-201ENST00000266079 SFXN3Q9BWM7 321 aa10.7□□□□□ -0.7
PRPF6-201ENST00000266079 LYRM2Q9NU23 88 aaPredicted RBP10.7□□□□□ -0.7
PRPF6-201ENST00000266079 TRAV1-1A0A0B4J248 108 aa10.7□□□□□ -0.7
PRPF6-201ENST00000266079 NKX2-6A6NCS4 301 aa10.7□□□□□ -0.7
PRPF6-201ENST00000266079 OR4A8P0C604 315 aa10.7□□□□□ -0.7
PRPF6-201ENST00000266079 OPRM1P35372 400 aa10.7□□□□□ -0.7
PRPF6-201ENST00000266079 NKX2-1P43699 371 aaPredicted RBP10.7□□□□□ -0.7
PRPF6-201ENST00000266079 PAX5Q02548 391 aa10.7□□□□□ -0.7
PRPF6-201ENST00000266079 SNAI3Q3KNW1 292 aa10.7□□□□□ -0.7
PRPF6-201ENST00000266079 OR11L1Q8NGX0 322 aa10.7□□□□□ -0.7
PRPF6-201ENST00000266079 VKORC1Q9BQB6 163 aa10.7□□□□□ -0.7
PRPF6-201ENST00000266079 CISD1Q9NZ45 108 aaKnown RBP10.7□□□□□ -0.7
PRPF6-201ENST00000266079 GNG13Q9P2W3 67 aa10.7□□□□□ -0.7
PRPF6-201ENST00000266079 A8MXE2 369 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms