RNA–Protein interactions for RNA: ENST00000262539.7

PTPN3-201, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 5 BASIC

Gene PTPN3, Length 6,832 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-201ENST00000262539 PI4KAP42356 2102 aa7.06□□□□□ -1.28
PTPN3-201ENST00000262539 WNT2P09544 360 aa7.06□□□□□ -1.28
PTPN3-201ENST00000262539 MUC1P15941 1255 aaPredicted RBP7.06□□□□□ -1.28
PTPN3-201ENST00000262539 HLA-DRB3P79483 266 aa7.06□□□□□ -1.28
PTPN3-201ENST00000262539 LIAT1Q6ZQX7 453 aa7.06□□□□□ -1.28
PTPN3-201ENST00000262539 FDCSPQ8NFU4 85 aa7.06□□□□□ -1.28
PTPN3-201ENST00000262539 EAF1Q96JC9 268 aaPredicted RBP7.06□□□□□ -1.28
PTPN3-201ENST00000262539 TDRD6O60522 2096 aaKnown RBP7.06□□□□□ -1.28
PTPN3-201ENST00000262539 PQLC2LA1A4F0 135 aa7.06□□□□□ -1.28
PTPN3-201ENST00000262539 C9orf170A2RU37 121 aa7.06□□□□□ -1.28
PTPN3-201ENST00000262539 GNG7O60262 68 aa7.06□□□□□ -1.28
PTPN3-201ENST00000262539 FCGR3AP08637 254 aa7.06□□□□□ -1.28
PTPN3-201ENST00000262539 UBE2V2Q15819 145 aa7.06□□□□□ -1.28
PTPN3-201ENST00000262539 KPTNQ9Y664 436 aa7.06□□□□□ -1.28
PTPN3-201ENST00000262539 PPP1CCP36873 323 aaKnown RBP7.06□□□□□ -1.28
PTPN3-201ENST00000262539 QRFPP83859 136 aa7.06□□□□□ -1.28
PTPN3-201ENST00000262539 ATP6V1FQ16864 119 aa7.06□□□□□ -1.28
PTPN3-201ENST00000262539 OR2D2Q9H210 308 aa7.06□□□□□ -1.28
PTPN3-201ENST00000262539 RCC2Q9P258 522 aaKnown RBP7.06□□□□□ -1.28
PTPN3-201ENST00000262539 SIX6O95475 246 aa7.05□□□□□ -1.28
PTPN3-201ENST00000262539 GPANK1O95872 356 aa7.05□□□□□ -1.28
PTPN3-201ENST00000262539 PPYP01298 95 aa7.05□□□□□ -1.28
PTPN3-201ENST00000262539 RRASP10301 218 aa7.05□□□□□ -1.28
PTPN3-201ENST00000262539 CD40P25942 277 aa7.05□□□□□ -1.28
PTPN3-201ENST00000262539 ERVFC1-1P60608 527 aa7.05□□□□□ -1.28
PTPN3-201ENST00000262539 SIGLECL1Q8N7X8 197 aa7.05□□□□□ -1.28
PTPN3-201ENST00000262539 WBP1Q96G27 269 aa7.05□□□□□ -1.28
PTPN3-201ENST00000262539 GFI1Q99684 422 aa7.05□□□□□ -1.28
PTPN3-201ENST00000262539 ELF5Q9UKW6 265 aaPredicted RBP7.05□□□□□ -1.28
PTPN3-201ENST00000262539 MMP24Q9Y5R2 645 aa7.05□□□□□ -1.28
PTPN3-201ENST00000262539 KRASP01116 189 aa7.05□□□□□ -1.28
PTPN3-201ENST00000262539 EFNB2P52799 333 aa7.05□□□□□ -1.28
PTPN3-201ENST00000262539 MUC15Q8N387 334 aa7.05□□□□□ -1.28
PTPN3-201ENST00000262539 YAE1D1Q9NRH1 226 aa7.05□□□□□ -1.28
PTPN3-201ENST00000262539 KCNK7Q9Y2U2 307 aa7.05□□□□□ -1.28
PTPN3-201ENST00000262539 OR2W1Q9Y3N9 320 aa7.05□□□□□ -1.28
PTPN3-201ENST00000262539 TRBV6-7A0A0A0MS04 114 aa7.05□□□□□ -1.28
PTPN3-201ENST00000262539 E9PLN8 166 aa7.05□□□□□ -1.28
PTPN3-201ENST00000262539 RBFOX2O43251 390 aaKnown RBP eCLIP7.05□□□□□ -1.28
PTPN3-201ENST00000262539 SPNP16150 400 aa7.05□□□□□ -1.28
PTPN3-201ENST00000262539 KIR2DL2P43627 348 aaPredicted RBP7.05□□□□□ -1.28
PTPN3-201ENST00000262539 PPP1R1AQ13522 171 aa7.05□□□□□ -1.28
PTPN3-201ENST00000262539 LY6EQ16553 131 aa7.05□□□□□ -1.28
PTPN3-201ENST00000262539 POC1AQ8NBT0 407 aa7.05□□□□□ -1.28
PTPN3-201ENST00000262539 OR10A7Q8NGE5 316 aa7.05□□□□□ -1.28
PTPN3-201ENST00000262539 SSC4DQ8WTU2 575 aa7.05□□□□□ -1.28
PTPN3-201ENST00000262539 NEIL1Q96FI4 390 aaPredicted RBP7.05□□□□□ -1.28
PTPN3-201ENST00000262539 VKORC1Q9BQB6 163 aa7.05□□□□□ -1.28
PTPN3-201ENST00000262539 CLN8Q9UBY8 286 aa7.05□□□□□ -1.28
PTPN3-201ENST00000262539 G3V3Q6 166 aa7.05□□□□□ -1.28
PTPN3-201ENST00000262539 ITGB1BP1O14713 200 aa7.05□□□□□ -1.28
PTPN3-201ENST00000262539 PAX5Q02548 391 aa7.05□□□□□ -1.28
PTPN3-201ENST00000262539 SLC25A40Q8TBP6 338 aa7.05□□□□□ -1.28
PTPN3-201ENST00000262539 IGKV1-9A0A0C4DH69 117 aa7.05□□□□□ -1.28
PTPN3-201ENST00000262539 S100A8P05109 93 aa7.05□□□□□ -1.28
PTPN3-201ENST00000262539 KRTAP27-1Q3LI81 207 aa7.05□□□□□ -1.28
PTPN3-201ENST00000262539 DHRS11Q6UWP2 260 aa7.05□□□□□ -1.28
PTPN3-201ENST00000262539 TMUB2Q71RG4 321 aa7.05□□□□□ -1.28
PTPN3-201ENST00000262539 C1orf147Q96MC9 270 aaPredicted RBP7.05□□□□□ -1.28
PTPN3-201ENST00000262539 CABLES2Q9BTV7 478 aa7.05□□□□□ -1.28
PTPN3-201ENST00000262539 OR2J1Q9GZK6 312 aa7.05□□□□□ -1.28
PTPN3-201ENST00000262539 PARP11Q9NR21 331 aa7.05□□□□□ -1.28
PTPN3-201ENST00000262539 RNF7Q9UBF6 113 aa7.05□□□□□ -1.28
PTPN3-201ENST00000262539 MPC2O95563 127 aa7.04□□□□□ -1.28
PTPN3-201ENST00000262539 IGKV3-15P01624 115 aa7.04□□□□□ -1.28
PTPN3-201ENST00000262539 PI3P19957 117 aa7.04□□□□□ -1.28
PTPN3-201ENST00000262539 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.04□□□□□ -1.28
PTPN3-201ENST00000262539 SNX22Q96L94 193 aa7.04□□□□□ -1.28
PTPN3-201ENST00000262539 INSIG2Q9Y5U4 225 aa7.04□□□□□ -1.28
PTPN3-201ENST00000262539 APC2O95996 2303 aa7.04□□□□□ -1.28
PTPN3-201ENST00000262539 PLXND1Q9Y4D7 1925 aa7.04□□□□□ -1.28
PTPN3-201ENST00000262539 A0A1B0GU03 582 aa7.04□□□□□ -1.28
PTPN3-201ENST00000262539 SOCS1O15524 211 aa7.04□□□□□ -1.28
PTPN3-201ENST00000262539 HPXP02790 462 aa7.04□□□□□ -1.28
PTPN3-201ENST00000262539 TMEM50BP56557 158 aa7.04□□□□□ -1.28
PTPN3-201ENST00000262539 EBLN2Q6P2I7 272 aa7.04□□□□□ -1.28
PTPN3-201ENST00000262539 ZNF66Q6ZN08 573 aa7.04□□□□□ -1.28
PTPN3-201ENST00000262539 NRIP2Q9BQI9 281 aa7.04□□□□□ -1.28
PTPN3-201ENST00000262539 SCN3AQ9NY46 2000 aa7.04□□□□□ -1.28
PTPN3-201ENST00000262539 LINC00862A6NCI5 91 aa7.04□□□□□ -1.28
PTPN3-201ENST00000262539 OOEPA6NGQ2 149 aa7.04□□□□□ -1.28
PTPN3-201ENST00000262539 TRIM77I1YAP6 450 aa7.04□□□□□ -1.28
PTPN3-201ENST00000262539 P2RY1P47900 373 aa7.04□□□□□ -1.28
PTPN3-201ENST00000262539 KLRB1Q12918 225 aa7.04□□□□□ -1.28
PTPN3-201ENST00000262539 IZUMO4Q1ZYL8 232 aa7.04□□□□□ -1.28
PTPN3-201ENST00000262539 C9orf62Q8N4C0 152 aa7.04□□□□□ -1.28
PTPN3-201ENST00000262539 PARD6AQ9NPB6 346 aa7.04□□□□□ -1.28
PTPN3-201ENST00000262539 SIAH2O43255 324 aa7.04□□□□□ -1.28
PTPN3-201ENST00000262539 LANCL1O43813 399 aa7.04□□□□□ -1.28
PTPN3-201ENST00000262539 CEACAM8P31997 349 aaPredicted RBP7.04□□□□□ -1.28
PTPN3-201ENST00000262539 SLC35E4Q6ICL7 350 aa7.04□□□□□ -1.28
PTPN3-201ENST00000262539 VSTM2AQ8TAG5 236 aa7.04□□□□□ -1.28
PTPN3-201ENST00000262539 RBPMSQ93062 196 aaKnown RBP7.04□□□□□ -1.28
PTPN3-201ENST00000262539 LHX4Q969G2 390 aa7.04□□□□□ -1.28
PTPN3-201ENST00000262539 PERPQ96FX8 193 aa7.04□□□□□ -1.28
PTPN3-201ENST00000262539 RNF2Q99496 336 aa7.04□□□□□ -1.28
PTPN3-201ENST00000262539 TMPRSS5Q9H3S3 457 aa7.04□□□□□ -1.28
PTPN3-201ENST00000262539 ZNF665Q9H7R5 613 aa7.04□□□□□ -1.28
PTPN3-201ENST00000262539 VSIG4Q9Y279 399 aa7.04□□□□□ -1.28
PTPN3-201ENST00000262539 LPAR6P43657 344 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms