RNA–Protein interactions for RNA: ENST00000262396.10

TRAF4-202, Transcript of TNF receptor associated factor 4, humanhuman

TSL 1 (best) BASIC

Gene TRAF4, Length 683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-202ENST00000262396 PYHIN1Q6K0P9 492 aa9.54□□□□□ -0.88
TRAF4-202ENST00000262396 FAM71F2Q6NXP2 309 aa9.54□□□□□ -0.88
TRAF4-202ENST00000262396 ZNF833PQ6ZTB9 187 aa9.54□□□□□ -0.88
TRAF4-202ENST00000262396 C5orf24Q7Z6I8 188 aa9.54□□□□□ -0.88
TRAF4-202ENST00000262396 TCTEX1D1Q8N7M0 179 aa9.54□□□□□ -0.88
TRAF4-202ENST00000262396 NANOGP1Q8N7R0 232 aa9.54□□□□□ -0.88
TRAF4-202ENST00000262396 OR6Q1Q8NGQ2 317 aa9.54□□□□□ -0.88
TRAF4-202ENST00000262396 DCUN1D4Q92564 292 aa9.54□□□□□ -0.88
TRAF4-202ENST00000262396 SULT4A1Q9BR01 284 aa9.54□□□□□ -0.88
TRAF4-202ENST00000262396 RIMS4Q9H426 269 aaPredicted RBP9.54□□□□□ -0.88
TRAF4-202ENST00000262396 ZNF221Q9UK13 617 aa9.54□□□□□ -0.88
TRAF4-202ENST00000262396 MGAT4AQ9UM21 535 aa9.54□□□□□ -0.88
TRAF4-202ENST00000262396 WASHC3Q9Y3C0 194 aa9.54□□□□□ -0.88
TRAF4-202ENST00000262396 RRHO14718 337 aa9.53□□□□□ -0.88
TRAF4-202ENST00000262396 APOA2P02652 100 aa9.53□□□□□ -0.88
TRAF4-202ENST00000262396 HSMCR30P0CW71 290 aa9.53□□□□□ -0.88
TRAF4-202ENST00000262396 SRMP19623 302 aa9.53□□□□□ -0.88
TRAF4-202ENST00000262396 ZBTB25P24278 435 aa9.53□□□□□ -0.88
TRAF4-202ENST00000262396 CHATP28329 748 aa9.53□□□□□ -0.88
TRAF4-202ENST00000262396 PPIFP30405 207 aaKnown RBP9.53□□□□□ -0.88
TRAF4-202ENST00000262396 CEACAM6P40199 344 aa9.53□□□□□ -0.88
TRAF4-202ENST00000262396 TPPP2P59282 170 aa9.53□□□□□ -0.88
TRAF4-202ENST00000262396 RPS16P62249 146 aaKnown RBP9.53□□□□□ -0.88
TRAF4-202ENST00000262396 GNB1P62873 340 aa9.53□□□□□ -0.88
TRAF4-202ENST00000262396 CBX3Q13185 183 aa9.53□□□□□ -0.88
TRAF4-202ENST00000262396 FHL3Q13643 280 aa9.53□□□□□ -0.88
TRAF4-202ENST00000262396 HMGN3Q15651 99 aa9.53□□□□□ -0.88
TRAF4-202ENST00000262396 ACTBL2Q562R1 376 aa9.53□□□□□ -0.88
TRAF4-202ENST00000262396 RPL39P5Q59GN2 51 aa9.53□□□□□ -0.88
TRAF4-202ENST00000262396 SIGIRRQ6IA17 410 aa9.53□□□□□ -0.88
TRAF4-202ENST00000262396 UNQ5815/PRO19632Q6UWF5 114 aa9.53□□□□□ -0.88
TRAF4-202ENST00000262396 GLDNQ6ZMI3 551 aaPredicted RBP9.53□□□□□ -0.88
TRAF4-202ENST00000262396 PPP1R27Q86WC6 154 aa9.53□□□□□ -0.88
TRAF4-202ENST00000262396 PHYHIPQ92561 330 aa9.53□□□□□ -0.88
TRAF4-202ENST00000262396 UFD1Q92890 307 aa9.53□□□□□ -0.88
TRAF4-202ENST00000262396 FLYWCH2Q96CP2 140 aaKnown RBP9.53□□□□□ -0.88
TRAF4-202ENST00000262396 RITA1Q96K30 269 aa9.53□□□□□ -0.88
TRAF4-202ENST00000262396 MS4A10Q96PG2 267 aa9.53□□□□□ -0.88
TRAF4-202ENST00000262396 RSRP1Q9BUV0 290 aa9.53□□□□□ -0.88
TRAF4-202ENST00000262396 ELOVL1Q9BW60 279 aa9.53□□□□□ -0.88
TRAF4-202ENST00000262396 ZMAT4Q9H898 229 aa9.53□□□□□ -0.88
TRAF4-202ENST00000262396 PALMDQ9NP74 551 aa9.53□□□□□ -0.88
TRAF4-202ENST00000262396 METTL1Q9UBP6 276 aaKnown RBP9.53□□□□□ -0.88
TRAF4-202ENST00000262396 SCOCQ9UIL1 159 aa9.53□□□□□ -0.88
TRAF4-202ENST00000262396 LSM4Q9Y4Z0 139 aaKnown RBP9.53□□□□□ -0.88
TRAF4-202ENST00000262396 I3L521 148 aa9.52□□□□□ -0.89
TRAF4-202ENST00000262396 RBBP9O75884 186 aa9.52□□□□□ -0.89
TRAF4-202ENST00000262396 CNIH1O95406 144 aa9.52□□□□□ -0.89
TRAF4-202ENST00000262396 BPNT1O95861 308 aa9.52□□□□□ -0.89
TRAF4-202ENST00000262396 IGHV3-11P01762 117 aa9.52□□□□□ -0.89
TRAF4-202ENST00000262396 ARSBP15848 533 aa9.52□□□□□ -0.89
TRAF4-202ENST00000262396 SLURP1P55000 103 aa9.52□□□□□ -0.89
TRAF4-202ENST00000262396 CX3CL1P78423 397 aa9.52□□□□□ -0.89
TRAF4-202ENST00000262396 RUNX1Q01196 453 aa9.52□□□□□ -0.89
TRAF4-202ENST00000262396 INSL4Q14641 139 aa9.52□□□□□ -0.89
TRAF4-202ENST00000262396 SPHARQ15513 63 aa9.52□□□□□ -0.89
TRAF4-202ENST00000262396 LY6G6FQ5SQ64 297 aa9.52□□□□□ -0.89
TRAF4-202ENST00000262396 ODF3L1Q8IXM7 274 aa9.52□□□□□ -0.89
TRAF4-202ENST00000262396 SVOPQ8N4V2 548 aa9.52□□□□□ -0.89
TRAF4-202ENST00000262396 ZNF485Q8NCK3 441 aa9.52□□□□□ -0.89
TRAF4-202ENST00000262396 NPBQ8NG41 125 aa9.52□□□□□ -0.89
TRAF4-202ENST00000262396 OR6M1Q8NGM8 313 aa9.52□□□□□ -0.89
TRAF4-202ENST00000262396 CASTOR1Q8WTX7 329 aa9.52□□□□□ -0.89
TRAF4-202ENST00000262396 ABHD14BQ96IU4 210 aa9.52□□□□□ -0.89
TRAF4-202ENST00000262396 TSNAXQ99598 290 aaKnown RBP9.52□□□□□ -0.89
TRAF4-202ENST00000262396 NICN1Q9BSH3 213 aa9.52□□□□□ -0.89
TRAF4-202ENST00000262396 CCDC90BQ9GZT6 254 aa9.52□□□□□ -0.89
TRAF4-202ENST00000262396 ALX4Q9H161 411 aaPredicted RBP9.52□□□□□ -0.89
TRAF4-202ENST00000262396 PLCXD1Q9NUJ7 323 aa9.52□□□□□ -0.89
TRAF4-202ENST00000262396 RBM7Q9Y580 266 aaKnown RBP9.52□□□□□ -0.89
TRAF4-202ENST00000262396 C13orf42A0A1B0GVH6 325 aa9.51□□□□□ -0.89
TRAF4-202ENST00000262396 C3orf84H3BNL1 204 aa9.51□□□□□ -0.89
TRAF4-202ENST00000262396 SLC22A1O15245 554 aa9.51□□□□□ -0.89
TRAF4-202ENST00000262396 NDUFA3O95167 84 aa9.51□□□□□ -0.89
TRAF4-202ENST00000262396 IGLV1-40P01703 118 aa9.51□□□□□ -0.89
TRAF4-202ENST00000262396 CDK1P06493 297 aa9.51□□□□□ -0.89
TRAF4-202ENST00000262396 LGALS1P09382 135 aaKnown RBP9.51□□□□□ -0.89
TRAF4-202ENST00000262396 GNAO1P09471 354 aa9.51□□□□□ -0.89
TRAF4-202ENST00000262396 OR8U9P0C7N5 309 aa9.51□□□□□ -0.89
TRAF4-202ENST00000262396 HLA-DRB3P79483 266 aa9.51□□□□□ -0.89
TRAF4-202ENST00000262396 P2RY14Q15391 338 aa9.51□□□□□ -0.89
TRAF4-202ENST00000262396 RAB11BQ15907 218 aa9.51□□□□□ -0.89
TRAF4-202ENST00000262396 SRSF7Q16629 238 aaKnown RBP eCLIP9.51□□□□□ -0.89
TRAF4-202ENST00000262396 OVCH2Q7RTZ1 564 aa9.51□□□□□ -0.89
TRAF4-202ENST00000262396 GRPEL2Q8TAA5 225 aa9.51□□□□□ -0.89
TRAF4-202ENST00000262396 ARPC1AQ92747 370 aa9.51□□□□□ -0.89
TRAF4-202ENST00000262396 TMEM203Q969S6 136 aa9.51□□□□□ -0.89
TRAF4-202ENST00000262396 CMSS1Q9BQ75 279 aaKnown RBP9.51□□□□□ -0.89
TRAF4-202ENST00000262396 FAM103A1Q9BTL3 118 aaKnown RBP9.51□□□□□ -0.89
TRAF4-202ENST00000262396 IFI27L2Q9H2X8 130 aa9.51□□□□□ -0.89
TRAF4-202ENST00000262396 KCNK15Q9H427 330 aa9.51□□□□□ -0.89
TRAF4-202ENST00000262396 AK3Q9UIJ7 227 aa9.51□□□□□ -0.89
TRAF4-202ENST00000262396 ERICH4A6NGS2 130 aa9.5□□□□□ -0.89
TRAF4-202ENST00000262396 H0YJW9 148 aa9.5□□□□□ -0.89
TRAF4-202ENST00000262396 ARL6IP5O75915 188 aa9.5□□□□□ -0.89
TRAF4-202ENST00000262396 TRGV3P03979 118 aa9.5□□□□□ -0.89
TRAF4-202ENST00000262396 HSPB1P04792 205 aaKnown RBP9.5□□□□□ -0.89
TRAF4-202ENST00000262396 CT45A6P0DMU7 189 aa9.5□□□□□ -0.89
TRAF4-202ENST00000262396 CT45A5P0DMU8 189 aa9.5□□□□□ -0.89
TRAF4-202ENST00000262396 CT45A7P0DMV0 189 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms