RNA–Protein interactions for RNA: ENST00000262291.8

VMP1-201, Transcript of vacuole membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMP1, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-201ENST00000262291 WFDC8Q8IUA0 241 aa11.42□□□□□ -0.58
VMP1-201ENST00000262291 RNASE11Q8TAA1 199 aaKnown RBP11.42□□□□□ -0.58
VMP1-201ENST00000262291 PLPPR2Q96GM1 343 aa11.42□□□□□ -0.58
VMP1-201ENST00000262291 ATG101Q9BSB4 218 aa11.42□□□□□ -0.58
VMP1-201ENST00000262291 GAR1Q9NY12 217 aaKnown RBP11.42□□□□□ -0.58
VMP1-201ENST00000262291 PPP1R3CQ9UQK1 317 aa11.42□□□□□ -0.58
VMP1-201ENST00000262291 RBM7Q9Y580 266 aaKnown RBP11.42□□□□□ -0.58
VMP1-201ENST00000262291 A0A1B0GV50 99 aa11.42□□□□□ -0.58
VMP1-201ENST00000262291 NKX2-6A6NCS4 301 aa11.42□□□□□ -0.58
VMP1-201ENST00000262291 A8MXE2 369 aa11.42□□□□□ -0.58
VMP1-201ENST00000262291 FAM157AC9JC47 383 aa11.42□□□□□ -0.58
VMP1-201ENST00000262291 MBPP02686 304 aaPredicted RBP11.42□□□□□ -0.58
VMP1-201ENST00000262291 CD5P06127 495 aa11.42□□□□□ -0.58
VMP1-201ENST00000262291 KITLGP21583 273 aa11.42□□□□□ -0.58
VMP1-201ENST00000262291 LTC4SQ16873 150 aa11.42□□□□□ -0.58
VMP1-201ENST00000262291 ZNF497Q6ZNH5 498 aa11.42□□□□□ -0.58
VMP1-201ENST00000262291 CCDC71LQ8N9Z2 235 aa11.42□□□□□ -0.58
VMP1-201ENST00000262291 OR1L1Q8NH94 360 aa11.42□□□□□ -0.58
VMP1-201ENST00000262291 CNTNAP3Q9BZ76 1288 aa11.42□□□□□ -0.58
VMP1-201ENST00000262291 TAF9BQ9HBM6 251 aa11.42□□□□□ -0.58
VMP1-201ENST00000262291 RNF150Q9ULK6 438 aa11.42□□□□□ -0.58
VMP1-201ENST00000262291 NUDT19A8MXV4 375 aa11.41□□□□□ -0.58
VMP1-201ENST00000262291 ZNF16P17020 682 aaPredicted RBP11.41□□□□□ -0.58
VMP1-201ENST00000262291 SULT1A1P50225 295 aa11.41□□□□□ -0.58
VMP1-201ENST00000262291 ASCL1P50553 236 aa11.41□□□□□ -0.58
VMP1-201ENST00000262291 UCP3P55916 312 aa11.41□□□□□ -0.58
VMP1-201ENST00000262291 EDDM3AQ14507 147 aa11.41□□□□□ -0.58
VMP1-201ENST00000262291 ZNF146Q15072 292 aa11.41□□□□□ -0.58
VMP1-201ENST00000262291 ACP7Q6ZNF0 438 aa11.41□□□□□ -0.58
VMP1-201ENST00000262291 Q8IYB0 196 aa11.41□□□□□ -0.58
VMP1-201ENST00000262291 CD300LFQ8TDQ1 290 aa11.41□□□□□ -0.58
VMP1-201ENST00000262291 GALNT14Q96FL9 552 aa11.41□□□□□ -0.58
VMP1-201ENST00000262291 C18orf12Q96KH6 178 aa11.41□□□□□ -0.58
VMP1-201ENST00000262291 SFXN3Q9BWM7 321 aa11.41□□□□□ -0.58
VMP1-201ENST00000262291 KCNS2Q9ULS6 477 aa11.41□□□□□ -0.58
VMP1-201ENST00000262291 MEMO1Q9Y316 297 aa11.41□□□□□ -0.58
VMP1-201ENST00000262291 A0A1B0GWJ7 208 aa11.41□□□□□ -0.58
VMP1-201ENST00000262291 TMEM210A6NLX4 147 aa11.41□□□□□ -0.58
VMP1-201ENST00000262291 TUSC2O75896 110 aa11.41□□□□□ -0.58
VMP1-201ENST00000262291 HOXA5P20719 270 aa11.41□□□□□ -0.58
VMP1-201ENST00000262291 OR3A1P47881 315 aa11.41□□□□□ -0.58
VMP1-201ENST00000262291 COL10A1Q03692 680 aa11.41□□□□□ -0.58
VMP1-201ENST00000262291 MBNL2Q5VZF2 373 aaKnown RBP11.41□□□□□ -0.58
VMP1-201ENST00000262291 RPL7L1Q6DKI1 246 aaKnown RBP11.41□□□□□ -0.58
VMP1-201ENST00000262291 Q6ZS49 121 aa11.41□□□□□ -0.58
VMP1-201ENST00000262291 MOGAT3Q86VF5 341 aa11.41□□□□□ -0.58
VMP1-201ENST00000262291 LGI3Q8N145 548 aa11.41□□□□□ -0.58
VMP1-201ENST00000262291 RFESDQ8TAC1 157 aa11.41□□□□□ -0.58
VMP1-201ENST00000262291 MAGT1Q9H0U3 335 aa11.41□□□□□ -0.58
VMP1-201ENST00000262291 POLEQ07864 2286 aa11.41□□□□□ -0.58
VMP1-201ENST00000262291 TRBV6-7A0A0A0MS04 114 aa11.4□□□□□ -0.58
VMP1-201ENST00000262291 MED19A0JLT2 244 aaPredicted RBP11.4□□□□□ -0.58
VMP1-201ENST00000262291 SFTPCP11686 197 aa11.4□□□□□ -0.58
VMP1-201ENST00000262291 HIST1H1BP16401 226 aaKnown RBP11.4□□□□□ -0.58
VMP1-201ENST00000262291 GABRA2P47869 451 aa11.4□□□□□ -0.58
VMP1-201ENST00000262291 CDX1P47902 265 aaPredicted RBP11.4□□□□□ -0.58
VMP1-201ENST00000262291 GLIPR1P48060 266 aa11.4□□□□□ -0.58
VMP1-201ENST00000262291 SPNS3Q6ZMD2 512 aa11.4□□□□□ -0.58
VMP1-201ENST00000262291 Q6ZRG5 221 aa11.4□□□□□ -0.58
VMP1-201ENST00000262291 MRGPRDQ8TDS7 321 aa11.4□□□□□ -0.58
VMP1-201ENST00000262291 BOD1Q96IK1 185 aa11.4□□□□□ -0.58
VMP1-201ENST00000262291 OR2V2Q96R30 315 aa11.4□□□□□ -0.58
VMP1-201ENST00000262291 GPR61Q9BZJ8 451 aa11.4□□□□□ -0.58
VMP1-201ENST00000262291 DOK5Q9P104 306 aa11.4□□□□□ -0.58
VMP1-201ENST00000262291 TAAR3PQ9P1P4 343 aa11.4□□□□□ -0.58
VMP1-201ENST00000262291 COL6A6A6NMZ7 2263 aa11.4□□□□□ -0.58
VMP1-201ENST00000262291 IGHV3-43A0A0B4J1X8 118 aa11.4□□□□□ -0.58
VMP1-201ENST00000262291 IGHV3-43DP0DP04 118 aa11.4□□□□□ -0.58
VMP1-201ENST00000262291 EPHA1P21709 976 aa11.4□□□□□ -0.58
VMP1-201ENST00000262291 CEACAM6P40199 344 aa11.4□□□□□ -0.58
VMP1-201ENST00000262291 GNMTQ14749 295 aa11.4□□□□□ -0.58
VMP1-201ENST00000262291 ZNF880Q6PDB4 577 aa11.4□□□□□ -0.58
VMP1-201ENST00000262291 TGIF2LYQ8IUE0 185 aa11.4□□□□□ -0.58
VMP1-201ENST00000262291 ZNF695Q8IW36 515 aa11.4□□□□□ -0.58
VMP1-201ENST00000262291 ZCCHC24Q8N2G6 241 aaKnown RBP11.4□□□□□ -0.58
VMP1-201ENST00000262291 OR52L2PQ8NGH6 319 aa11.4□□□□□ -0.58
VMP1-201ENST00000262291 SMIM8Q96KF7 97 aa11.4□□□□□ -0.58
VMP1-201ENST00000262291 RIMS4Q9H426 269 aaPredicted RBP11.4□□□□□ -0.58
VMP1-201ENST00000262291 OR2W1Q9Y3N9 320 aa11.4□□□□□ -0.58
VMP1-201ENST00000262291 PGLYRP1O75594 196 aaPredicted RBP11.39□□□□□ -0.59
VMP1-201ENST00000262291 IFNA17P01571 189 aa11.39□□□□□ -0.59
VMP1-201ENST00000262291 IGHV3-13P01766 116 aa11.39□□□□□ -0.59
VMP1-201ENST00000262291 IGHV3-7P01780 117 aa11.39□□□□□ -0.59
VMP1-201ENST00000262291 HKR1P10072 659 aa11.39□□□□□ -0.59
VMP1-201ENST00000262291 RELQ04864 619 aaPredicted RBP11.39□□□□□ -0.59
VMP1-201ENST00000262291 TESK1Q15569 626 aa11.39□□□□□ -0.59
VMP1-201ENST00000262291 H1FOOQ8IZA3 346 aaPredicted RBP11.39□□□□□ -0.59
VMP1-201ENST00000262291 CD177Q8N6Q3 437 aa11.39□□□□□ -0.59
VMP1-201ENST00000262291 COQ2Q96H96 371 aa11.39□□□□□ -0.59
VMP1-201ENST00000262291 NEU1Q99519 415 aa11.39□□□□□ -0.59
VMP1-201ENST00000262291 MRPL37Q9BZE1 423 aaKnown RBP11.39□□□□□ -0.59
VMP1-201ENST00000262291 HES4Q9HCC6 221 aa11.39□□□□□ -0.59
VMP1-201ENST00000262291 PLA2G2EQ9NZK7 142 aa11.39□□□□□ -0.59
VMP1-201ENST00000262291 SSUH2Q9Y2M2 353 aa11.39□□□□□ -0.59
VMP1-201ENST00000262291 DEFB108AA8MXU0 73 aa11.39□□□□□ -0.59
VMP1-201ENST00000262291 K7EPK0 472 aa11.39□□□□□ -0.59
VMP1-201ENST00000262291 ADAM20O43506 726 aa11.39□□□□□ -0.59
VMP1-201ENST00000262291 DVL1P1P54792 670 aaPredicted RBP11.39□□□□□ -0.59
VMP1-201ENST00000262291 KLF3P57682 345 aaPredicted RBP11.39□□□□□ -0.59
VMP1-201ENST00000262291 FAM71E2Q8N5Q1 922 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms