RNA–Protein interactions for RNA: ENST00000261007.9

CHRNA1-201, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene CHRNA1, Length 1,980 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-201ENST00000261007 DLEU1O43261 78 aa9.18□□□□□ -0.94
CHRNA1-201ENST00000261007 ZNF737O75373 536 aa9.18□□□□□ -0.94
CHRNA1-201ENST00000261007 TUSC2O75896 110 aa9.18□□□□□ -0.94
CHRNA1-201ENST00000261007 MBP02144 154 aa9.18□□□□□ -0.94
CHRNA1-201ENST00000261007 WNT2P09544 360 aa9.18□□□□□ -0.94
CHRNA1-201ENST00000261007 CTXN2P0C2S0 81 aa9.18□□□□□ -0.94
CHRNA1-201ENST00000261007 PATE4P0C8F1 98 aa9.18□□□□□ -0.94
CHRNA1-201ENST00000261007 G0S2P27469 103 aa9.18□□□□□ -0.94
CHRNA1-201ENST00000261007 OR10J1P30954 320 aa9.18□□□□□ -0.94
CHRNA1-201ENST00000261007 IDH3GP51553 393 aaPredicted RBP9.18□□□□□ -0.94
CHRNA1-201ENST00000261007 ARG2P78540 354 aa9.18□□□□□ -0.94
CHRNA1-201ENST00000261007 HERPUD1Q15011 391 aa9.18□□□□□ -0.94
CHRNA1-201ENST00000261007 LRRC75BQ2VPJ9 315 aa9.18□□□□□ -0.94
CHRNA1-201ENST00000261007 BRICD5Q6PL45 260 aa9.18□□□□□ -0.94
CHRNA1-201ENST00000261007 ZNF818PQ6ZRF7 136 aa9.18□□□□□ -0.94
CHRNA1-201ENST00000261007 OR2T10Q8NGZ9 312 aa9.18□□□□□ -0.94
CHRNA1-201ENST00000261007 FGFBP3Q8TAT2 258 aa9.18□□□□□ -0.94
CHRNA1-201ENST00000261007 ZNF442Q9H7R0 627 aa9.18□□□□□ -0.94
CHRNA1-201ENST00000261007 TRGV5A0A0B4J1U4 118 aa9.17□□□□□ -0.94
CHRNA1-201ENST00000261007 MAP1LC3B2A6NCE7 125 aa9.17□□□□□ -0.94
CHRNA1-201ENST00000261007 KIAA1324LA8MWY0 1029 aaPredicted RBP9.17□□□□□ -0.94
CHRNA1-201ENST00000261007 J3QW42 95 aa9.17□□□□□ -0.94
CHRNA1-201ENST00000261007 CNOT4O95628 575 aaKnown RBP9.17□□□□□ -0.94
CHRNA1-201ENST00000261007 CD55P08174 381 aa9.17□□□□□ -0.94
CHRNA1-201ENST00000261007 EDN3P14138 238 aa9.17□□□□□ -0.94
CHRNA1-201ENST00000261007 LCN2P80188 198 aa9.17□□□□□ -0.94
CHRNA1-201ENST00000261007 MEF2BQ02080 365 aaPredicted RBP9.17□□□□□ -0.94
CHRNA1-201ENST00000261007 ZNF766Q5HY98 468 aa9.17□□□□□ -0.94
CHRNA1-201ENST00000261007 TEX38Q6PEX7 206 aa9.17□□□□□ -0.94
CHRNA1-201ENST00000261007 MRPL21Q7Z2W9 205 aaKnown RBP9.17□□□□□ -0.94
CHRNA1-201ENST00000261007 ZNF573Q86YE8 665 aa9.17□□□□□ -0.94
CHRNA1-201ENST00000261007 GAPTQ8N292 157 aa9.17□□□□□ -0.94
CHRNA1-201ENST00000261007 ZNF525Q8N782 197 aa9.17□□□□□ -0.94
CHRNA1-201ENST00000261007 Q8NFD4 153 aa9.17□□□□□ -0.94
CHRNA1-201ENST00000261007 PIGCQ92535 297 aa9.17□□□□□ -0.94
CHRNA1-201ENST00000261007 REPIN1Q9BWE0 567 aaKnown RBP9.17□□□□□ -0.94
CHRNA1-201ENST00000261007 MAP1LC3BQ9GZQ8 125 aa9.17□□□□□ -0.94
CHRNA1-201ENST00000261007 OR51I2Q9H344 312 aa9.17□□□□□ -0.94
CHRNA1-201ENST00000261007 GOLT1BQ9Y3E0 138 aa9.17□□□□□ -0.94
CHRNA1-201ENST00000261007 TIMM9Q9Y5J7 89 aa9.17□□□□□ -0.94
CHRNA1-201ENST00000261007 LAMA1P25391 3075 aa9.17□□□□□ -0.94
CHRNA1-201ENST00000261007 A0A0C4DFX4 3053 aa9.17□□□□□ -0.94
CHRNA1-201ENST00000261007 SLC22A20A6NK97 555 aa9.17□□□□□ -0.94
CHRNA1-201ENST00000261007 VENTXO95231 258 aa9.17□□□□□ -0.94
CHRNA1-201ENST00000261007 HLA-HP01893 362 aa9.17□□□□□ -0.94
CHRNA1-201ENST00000261007 RPLP1P05386 114 aaKnown RBP9.17□□□□□ -0.94
CHRNA1-201ENST00000261007 S100GP29377 79 aa9.17□□□□□ -0.94
CHRNA1-201ENST00000261007 CNN1P51911 297 aaKnown RBP9.17□□□□□ -0.94
CHRNA1-201ENST00000261007 ERVS71-1P61550 626 aa9.17□□□□□ -0.94
CHRNA1-201ENST00000261007 ZNF295-AS1Q8N0V1 137 aa9.17□□□□□ -0.94
CHRNA1-201ENST00000261007 CPEB3Q8NE35 698 aaKnown RBP9.17□□□□□ -0.94
CHRNA1-201ENST00000261007 PCGF1Q9BSM1 259 aa9.17□□□□□ -0.94
CHRNA1-201ENST00000261007 RSG1Q9BU20 258 aa9.17□□□□□ -0.94
CHRNA1-201ENST00000261007 RBKSQ9H477 322 aa9.17□□□□□ -0.94
CHRNA1-201ENST00000261007 VSIRQ9H7M9 311 aa9.17□□□□□ -0.94
CHRNA1-201ENST00000261007 IGHV3-9P01782 118 aa9.16□□□□□ -0.94
CHRNA1-201ENST00000261007 TUBG1P23258 451 aa9.16□□□□□ -0.94
CHRNA1-201ENST00000261007 FGF8P55075 233 aaPredicted RBP9.16□□□□□ -0.94
CHRNA1-201ENST00000261007 HBG1P69891 147 aa9.16□□□□□ -0.94
CHRNA1-201ENST00000261007 HBG2P69892 147 aa9.16□□□□□ -0.94
CHRNA1-201ENST00000261007 KCNIP4Q6PIL6 250 aa9.16□□□□□ -0.94
CHRNA1-201ENST00000261007 IGF2-ASQ6U949 168 aa9.16□□□□□ -0.94
CHRNA1-201ENST00000261007 SSX7Q7RTT5 188 aa9.16□□□□□ -0.94
CHRNA1-201ENST00000261007 PNPLA5Q7Z6Z6 429 aaPredicted RBP9.16□□□□□ -0.94
CHRNA1-201ENST00000261007 TMEM37Q8WXS4 190 aa9.16□□□□□ -0.94
CHRNA1-201ENST00000261007 GPR146Q96CH1 333 aa9.16□□□□□ -0.94
CHRNA1-201ENST00000261007 TMEM208Q9BTX3 173 aa9.16□□□□□ -0.94
CHRNA1-201ENST00000261007 ZDHHC11Q9H8X9 412 aa9.16□□□□□ -0.94
CHRNA1-201ENST00000261007 CBLN4Q9NTU7 201 aa9.16□□□□□ -0.94
CHRNA1-201ENST00000261007 SLC39A9Q9NUM3 307 aa9.16□□□□□ -0.94
CHRNA1-201ENST00000261007 NAGKQ9UJ70 344 aa9.16□□□□□ -0.94
CHRNA1-201ENST00000261007 FUT9Q9Y231 359 aa9.16□□□□□ -0.94
CHRNA1-201ENST00000261007 KIR2DS1A0A191URI9 304 aa9.15□□□□□ -0.94
CHRNA1-201ENST00000261007 SS18L1O75177 396 aaPredicted RBP9.15□□□□□ -0.94
CHRNA1-201ENST00000261007 PGLYRP1O75594 196 aaPredicted RBP9.15□□□□□ -0.94
CHRNA1-201ENST00000261007 SCGB1D1O95968 90 aa9.15□□□□□ -0.94
CHRNA1-201ENST00000261007 F2RP25116 425 aa9.15□□□□□ -0.94
CHRNA1-201ENST00000261007 KIR2DS4P43632 304 aa9.15□□□□□ -0.94
CHRNA1-201ENST00000261007 PSMB3P49720 205 aa9.15□□□□□ -0.94
CHRNA1-201ENST00000261007 TMEM267Q0VDI3 215 aaPredicted RBP9.15□□□□□ -0.94
CHRNA1-201ENST00000261007 KIR2DS1Q14954 304 aa9.15□□□□□ -0.94
CHRNA1-201ENST00000261007 ZDHHC23Q8IYP9 409 aa9.15□□□□□ -0.94
CHRNA1-201ENST00000261007 C17orf78Q8N4C9 275 aa9.15□□□□□ -0.94
CHRNA1-201ENST00000261007 NECAP1Q8NC96 275 aa9.15□□□□□ -0.94
CHRNA1-201ENST00000261007 EXTL1Q92935 676 aa9.15□□□□□ -0.94
CHRNA1-201ENST00000261007 LHX4Q969G2 390 aa9.15□□□□□ -0.94
CHRNA1-201ENST00000261007 LSM10Q969L4 123 aaKnown RBP9.15□□□□□ -0.94
CHRNA1-201ENST00000261007 WDYHV1Q96HA8 205 aa9.15□□□□□ -0.94
CHRNA1-201ENST00000261007 WDR61Q9GZS3 305 aaKnown RBP9.15□□□□□ -0.94
CHRNA1-201ENST00000261007 MANBALQ9NQG1 85 aa9.15□□□□□ -0.94
CHRNA1-201ENST00000261007 POLR3KQ9Y2Y1 108 aaPredicted RBP9.15□□□□□ -0.94
CHRNA1-201ENST00000261007 C5orf49A4QMS7 147 aa9.15□□□□□ -0.95
CHRNA1-201ENST00000261007 LRP5LA4QPB2 252 aa9.15□□□□□ -0.95
CHRNA1-201ENST00000261007 SYNGR2O43760 224 aa9.15□□□□□ -0.95
CHRNA1-201ENST00000261007 NAPSAO96009 420 aa9.15□□□□□ -0.95
CHRNA1-201ENST00000261007 CD99P14209 185 aa9.15□□□□□ -0.95
CHRNA1-201ENST00000261007 OR3A1P47881 315 aa9.15□□□□□ -0.95
CHRNA1-201ENST00000261007 CEACAM21Q3KPI0 293 aa9.15□□□□□ -0.95
CHRNA1-201ENST00000261007 FBXW9Q5XUX1 488 aa9.15□□□□□ -0.95
CHRNA1-201ENST00000261007 LINC00596Q86U02 117 aa9.15□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms