RNA–Protein interactions for RNA: ENST00000259605.10

RNF38-201, Transcript of ring finger protein 38, humanhuman

TSL 1 (best) BASIC

Gene RNF38, Length 5,012 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-201ENST00000259605 FOXA1P55317 472 aa3.47□□□□□ -1.85
RNF38-201ENST00000259605 SLAQ13239 276 aa3.47□□□□□ -1.85
RNF38-201ENST00000259605 OR10J3Q5JRS4 329 aa3.47□□□□□ -1.85
RNF38-201ENST00000259605 SHISA2Q6UWI4 295 aa3.47□□□□□ -1.85
RNF38-201ENST00000259605 Q71RC1 249 aaPredicted RBP3.47□□□□□ -1.85
RNF38-201ENST00000259605 OR1N2Q8NGR9 330 aa3.47□□□□□ -1.85
RNF38-201ENST00000259605 PTX4Q96A99 478 aa3.47□□□□□ -1.85
RNF38-201ENST00000259605 QTRT1Q9BXR0 403 aaKnown RBP3.47□□□□□ -1.85
RNF38-201ENST00000259605 GPR27Q9NS67 375 aa3.47□□□□□ -1.85
RNF38-201ENST00000259605 FAM206AQ9NX38 181 aa3.47□□□□□ -1.85
RNF38-201ENST00000259605 HSF4Q9ULV5 492 aa3.47□□□□□ -1.85
RNF38-201ENST00000259605 U3KQ87 197 aa3.47□□□□□ -1.85
RNF38-201ENST00000259605 CEP250Q9BV73 2442 aa3.47□□□□□ -1.85
RNF38-201ENST00000259605 TMEM129A0AVI4 362 aa3.47□□□□□ -1.85
RNF38-201ENST00000259605 FITM1A5D6W6 292 aa3.47□□□□□ -1.85
RNF38-201ENST00000259605 FAM90A10PA6NDY2 464 aa3.47□□□□□ -1.85
RNF38-201ENST00000259605 FAM90A18PA6NE21 464 aa3.47□□□□□ -1.85
RNF38-201ENST00000259605 FAM90A16PA6NEW6 464 aa3.47□□□□□ -1.85
RNF38-201ENST00000259605 OR2W5A6NFC9 320 aa3.47□□□□□ -1.85
RNF38-201ENST00000259605 FAM90A20PA6NIJ5 464 aa3.47□□□□□ -1.85
RNF38-201ENST00000259605 FAM90A8PA6NJQ4 464 aa3.47□□□□□ -1.85
RNF38-201ENST00000259605 FAM90A7PA6NKC0 464 aa3.47□□□□□ -1.85
RNF38-201ENST00000259605 MPTX1A8MV57 137 aa3.47□□□□□ -1.85
RNF38-201ENST00000259605 FAM90A22PA8MWA6 464 aa3.47□□□□□ -1.85
RNF38-201ENST00000259605 FAM90A12PA8MX19 464 aa3.47□□□□□ -1.85
RNF38-201ENST00000259605 FAM90A5PA8MXJ8 464 aa3.47□□□□□ -1.85
RNF38-201ENST00000259605 FAM90A23PA8MXZ1 464 aa3.47□□□□□ -1.85
RNF38-201ENST00000259605 H3BMH7 237 aa3.47□□□□□ -1.85
RNF38-201ENST00000259605 UPK2O00526 184 aa3.47□□□□□ -1.85
RNF38-201ENST00000259605 IFI6P09912 130 aa3.47□□□□□ -1.85
RNF38-201ENST00000259605 FAM90A15PP0C7V4 464 aa3.47□□□□□ -1.85
RNF38-201ENST00000259605 FAM90A13PP0C7W8 464 aa3.47□□□□□ -1.85
RNF38-201ENST00000259605 FAM90A14PP0C7W9 464 aa3.47□□□□□ -1.85
RNF38-201ENST00000259605 FAM90A24PP0C7X0 464 aa3.47□□□□□ -1.85
RNF38-201ENST00000259605 EVI2AP22794 236 aa3.47□□□□□ -1.85
RNF38-201ENST00000259605 CX3CL1P78423 397 aa3.47□□□□□ -1.85
RNF38-201ENST00000259605 PLAC9Q5JTB6 97 aa3.47□□□□□ -1.85
RNF38-201ENST00000259605 RBM45Q8IUH3 476 aaKnown RBP3.47□□□□□ -1.85
RNF38-201ENST00000259605 GBGT1Q8N5D6 347 aa3.47□□□□□ -1.85
RNF38-201ENST00000259605 HGDQ93099 445 aa3.47□□□□□ -1.85
RNF38-201ENST00000259605 WDR34Q96EX3 536 aa3.47□□□□□ -1.85
RNF38-201ENST00000259605 RNF167Q9H6Y7 350 aa3.47□□□□□ -1.85
RNF38-201ENST00000259605 SDF2L1Q9HCN8 221 aa3.47□□□□□ -1.85
RNF38-201ENST00000259605 TBL2Q9Y4P3 447 aaKnown RBP3.47□□□□□ -1.85
RNF38-201ENST00000259605 STRCP1A6NGW2 1772 aa3.46□□□□□ -1.85
RNF38-201ENST00000259605 IGHV3-72A0A0B4J1Y9 119 aa3.46□□□□□ -1.85
RNF38-201ENST00000259605 UBE2L5PA0A1B0GUS4 154 aa3.46□□□□□ -1.85
RNF38-201ENST00000259605 CEACAM18A8MTB9 384 aa3.46□□□□□ -1.85
RNF38-201ENST00000259605 LINC00587B1AMM8 73 aa3.46□□□□□ -1.85
RNF38-201ENST00000259605 G3V3Q6 166 aa3.46□□□□□ -1.85
RNF38-201ENST00000259605 FCN1O00602 326 aa3.46□□□□□ -1.85
RNF38-201ENST00000259605 C1QL1O75973 258 aa3.46□□□□□ -1.85
RNF38-201ENST00000259605 CD8AP01732 235 aa3.46□□□□□ -1.85
RNF38-201ENST00000259605 CTSBP07858 339 aa3.46□□□□□ -1.85
RNF38-201ENST00000259605 FAM157CP0CG43 387 aa3.46□□□□□ -1.85
RNF38-201ENST00000259605 CRYGSP22914 178 aa3.46□□□□□ -1.85
RNF38-201ENST00000259605 CCL18P55774 89 aa3.46□□□□□ -1.85
RNF38-201ENST00000259605 SCAND1P57086 179 aa3.46□□□□□ -1.85
RNF38-201ENST00000259605 ZIC1Q15915 447 aa3.46□□□□□ -1.85
RNF38-201ENST00000259605 TEPPQ6URK8 271 aa3.46□□□□□ -1.85
RNF38-201ENST00000259605 LCNL1Q6ZST4 164 aa3.46□□□□□ -1.85
RNF38-201ENST00000259605 RELL2Q8NC24 303 aaPredicted RBP3.46□□□□□ -1.85
RNF38-201ENST00000259605 BVESQ8NE79 360 aa3.46□□□□□ -1.85
RNF38-201ENST00000259605 OR13C6PQ8NH95 151 aa3.46□□□□□ -1.85
RNF38-201ENST00000259605 MRAPQ8TCY5 172 aa3.46□□□□□ -1.85
RNF38-201ENST00000259605 GATA6Q92908 595 aa3.46□□□□□ -1.85
RNF38-201ENST00000259605 USMG5Q96IX5 58 aa3.46□□□□□ -1.85
RNF38-201ENST00000259605 UCN2Q96RP3 112 aa3.46□□□□□ -1.85
RNF38-201ENST00000259605 SORT1Q99523 831 aa3.46□□□□□ -1.85
RNF38-201ENST00000259605 SYT11Q9BT88 431 aa3.46□□□□□ -1.85
RNF38-201ENST00000259605 SVILO95425 2214 aa3.46□□□□□ -1.86
RNF38-201ENST00000259605 RGPD8O14715 1765 aaPredicted RBP3.46□□□□□ -1.86
RNF38-201ENST00000259605 CCDC88AQ3V6T2 1871 aa3.46□□□□□ -1.86
RNF38-201ENST00000259605 TMEM189A5PLL7 270 aa3.46□□□□□ -1.86
RNF38-201ENST00000259605 SLC17A2O00624 439 aa3.46□□□□□ -1.86
RNF38-201ENST00000259605 PRKNO60260 465 aaPredicted RBP3.46□□□□□ -1.86
RNF38-201ENST00000259605 IGKV1D-33P01593 117 aa3.46□□□□□ -1.86
RNF38-201ENST00000259605 IGKV1-33P01594 117 aa3.46□□□□□ -1.86
RNF38-201ENST00000259605 IGHA1P01876 353 aa3.46□□□□□ -1.86
RNF38-201ENST00000259605 IGHA2P01877 340 aa3.46□□□□□ -1.86
RNF38-201ENST00000259605 OR5AL1P0C617 328 aa3.46□□□□□ -1.86
RNF38-201ENST00000259605 SNRPBP14678 240 aaKnown RBP3.46□□□□□ -1.86
RNF38-201ENST00000259605 SLC6A1P30531 599 aa3.46□□□□□ -1.86
RNF38-201ENST00000259605 CLDN12P56749 244 aa3.46□□□□□ -1.86
RNF38-201ENST00000259605 CLDN18P56856 261 aa3.46□□□□□ -1.86
RNF38-201ENST00000259605 CLDN20P56880 219 aa3.46□□□□□ -1.86
RNF38-201ENST00000259605 KLF17Q5JT82 389 aaPredicted RBP3.46□□□□□ -1.86
RNF38-201ENST00000259605 SAPCD1Q5SSQ6 148 aa3.46□□□□□ -1.86
RNF38-201ENST00000259605 TMEM42Q69YG0 159 aa3.46□□□□□ -1.86
RNF38-201ENST00000259605 TMEM256Q8N2U0 113 aa3.46□□□□□ -1.86
RNF38-201ENST00000259605 TTC9CQ8N5M4 171 aa3.46□□□□□ -1.86
RNF38-201ENST00000259605 OR4C16Q8NGL9 310 aa3.46□□□□□ -1.86
RNF38-201ENST00000259605 ASB13Q8WXK3 278 aa3.46□□□□□ -1.86
RNF38-201ENST00000259605 ST6GALNAC6Q969X2 333 aa3.46□□□□□ -1.86
RNF38-201ENST00000259605 C2orf50Q96LR7 162 aa3.46□□□□□ -1.86
RNF38-201ENST00000259605 SPACA5Q96QH8 159 aa3.46□□□□□ -1.86
RNF38-201ENST00000259605 GABARAPL3Q9BY60 117 aa3.46□□□□□ -1.86
RNF38-201ENST00000259605 ZNF430Q9H8G1 570 aaPredicted RBP3.46□□□□□ -1.86
RNF38-201ENST00000259605 C21orf62Q9NYP8 219 aa3.46□□□□□ -1.86
RNF38-201ENST00000259605 ACACAQ13085 2346 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms