RNA–Protein interactions for RNA: ENST00000251739.9

VPS50-201, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS50, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-201ENST00000251739 TAS2R43P59537 309 aa7.98□□□□□ -1.13
VPS50-201ENST00000251739 HMGN3Q15651 99 aa7.98□□□□□ -1.13
VPS50-201ENST00000251739 LRRC36Q1X8D7 754 aa7.98□□□□□ -1.13
VPS50-201ENST00000251739 AWAT2Q6E213 333 aa7.98□□□□□ -1.13
VPS50-201ENST00000251739 FAM71F2Q6NXP2 309 aa7.98□□□□□ -1.13
VPS50-201ENST00000251739 NKAIN3Q8N8D7 197 aa7.98□□□□□ -1.13
VPS50-201ENST00000251739 ZNF555Q8NEP9 628 aa7.98□□□□□ -1.13
VPS50-201ENST00000251739 OR52L2PQ8NGH6 319 aa7.98□□□□□ -1.13
VPS50-201ENST00000251739 OR1N2Q8NGR9 330 aa7.98□□□□□ -1.13
VPS50-201ENST00000251739 GGHQ92820 318 aa7.98□□□□□ -1.13
VPS50-201ENST00000251739 TMEM80Q96HE8 168 aa7.98□□□□□ -1.13
VPS50-201ENST00000251739 YPEL2Q96QA6 119 aa7.98□□□□□ -1.13
VPS50-201ENST00000251739 ANKRD60Q9BZ19 345 aa7.98□□□□□ -1.13
VPS50-201ENST00000251739 WSB1Q9Y6I7 421 aa7.98□□□□□ -1.13
VPS50-201ENST00000251739 CRTAPO75718 401 aaPredicted RBP7.97□□□□□ -1.13
VPS50-201ENST00000251739 NAPSAO96009 420 aa7.97□□□□□ -1.13
VPS50-201ENST00000251739 MAS1P04201 325 aa7.97□□□□□ -1.13
VPS50-201ENST00000251739 CAPGP40121 348 aa7.97□□□□□ -1.13
VPS50-201ENST00000251739 RAB9AP51151 201 aa7.97□□□□□ -1.13
VPS50-201ENST00000251739 ST3GAL4Q11206 333 aa7.97□□□□□ -1.13
VPS50-201ENST00000251739 ZNF880Q6PDB4 577 aa7.97□□□□□ -1.13
VPS50-201ENST00000251739 ZNF429Q86V71 674 aa7.97□□□□□ -1.13
VPS50-201ENST00000251739 ASCL2Q99929 193 aa7.97□□□□□ -1.13
VPS50-201ENST00000251739 SULT4A1Q9BR01 284 aa7.97□□□□□ -1.13
VPS50-201ENST00000251739 ISYNA1Q9NPH2 558 aa7.97□□□□□ -1.13
VPS50-201ENST00000251739 PARP11Q9NR21 331 aa7.97□□□□□ -1.13
VPS50-201ENST00000251739 KCNIP1Q9NZI2 227 aa7.97□□□□□ -1.13
VPS50-201ENST00000251739 GHRLQ9UBU3 117 aa7.97□□□□□ -1.13
VPS50-201ENST00000251739 SMAD5-AS1Q9Y6J3 95 aa7.97□□□□□ -1.13
VPS50-201ENST00000251739 EPPK1P58107 5090 aaKnown RBP7.97□□□□□ -1.13
VPS50-201ENST00000251739 EFCAB10A6NFE3 127 aa7.96□□□□□ -1.14
VPS50-201ENST00000251739 OVOL1O14753 267 aa7.96□□□□□ -1.14
VPS50-201ENST00000251739 RGS11O94810 467 aa7.96□□□□□ -1.14
VPS50-201ENST00000251739 CD37P11049 281 aa7.96□□□□□ -1.14
VPS50-201ENST00000251739 EGR2P11161 476 aaPredicted RBP7.96□□□□□ -1.14
VPS50-201ENST00000251739 MED21Q13503 144 aa7.96□□□□□ -1.14
VPS50-201ENST00000251739 C1orf100Q5SVJ3 147 aa7.96□□□□□ -1.14
VPS50-201ENST00000251739 TTC23Q5W5X9 447 aa7.96□□□□□ -1.14
VPS50-201ENST00000251739 TMEM65Q6PI78 240 aa7.96□□□□□ -1.14
VPS50-201ENST00000251739 FAM131AQ6UXB0 335 aa7.96□□□□□ -1.14
VPS50-201ENST00000251739 SBSPONQ8IVN8 264 aa7.96□□□□□ -1.14
VPS50-201ENST00000251739 PACRGLQ8N7B6 248 aa7.96□□□□□ -1.14
VPS50-201ENST00000251739 SETD9Q8NE22 299 aa7.96□□□□□ -1.14
VPS50-201ENST00000251739 OR2AK2Q8NG84 335 aa7.96□□□□□ -1.14
VPS50-201ENST00000251739 DCUN1D4Q92564 292 aa7.96□□□□□ -1.14
VPS50-201ENST00000251739 THRSPQ92748 146 aa7.96□□□□□ -1.14
VPS50-201ENST00000251739 FAM46BQ96A09 425 aa7.96□□□□□ -1.14
VPS50-201ENST00000251739 OR5B12Q96R08 314 aa7.96□□□□□ -1.14
VPS50-201ENST00000251739 AGMATQ9BSE5 352 aa7.96□□□□□ -1.14
VPS50-201ENST00000251739 TOLLIPQ9H0E2 274 aa7.96□□□□□ -1.14
VPS50-201ENST00000251739 PARP12Q9H0J9 701 aaKnown RBP7.96□□□□□ -1.14
VPS50-201ENST00000251739 CST11Q9H112 138 aa7.96□□□□□ -1.14
VPS50-201ENST00000251739 ALX4Q9H161 411 aaPredicted RBP7.96□□□□□ -1.14
VPS50-201ENST00000251739 BATF3Q9NR55 127 aa7.96□□□□□ -1.14
VPS50-201ENST00000251739 FKBP14Q9NWM8 211 aa7.96□□□□□ -1.14
VPS50-201ENST00000251739 CNOT2Q9NZN8 540 aaKnown RBP7.96□□□□□ -1.14
VPS50-201ENST00000251739 PNMA8CA0A1B0GUJ8 204 aa7.95□□□□□ -1.14
VPS50-201ENST00000251739 OR5H14A6NHG9 310 aa7.95□□□□□ -1.14
VPS50-201ENST00000251739 ITGB1BP1O14713 200 aa7.95□□□□□ -1.14
VPS50-201ENST00000251739 LGALS1P09382 135 aaKnown RBP7.95□□□□□ -1.14
VPS50-201ENST00000251739 GNAO1P09471 354 aa7.95□□□□□ -1.14
VPS50-201ENST00000251739 UBBP0CG47 229 aa7.95□□□□□ -1.14
VPS50-201ENST00000251739 CT45A6P0DMU7 189 aa7.95□□□□□ -1.14
VPS50-201ENST00000251739 CT45A5P0DMU8 189 aa7.95□□□□□ -1.14
VPS50-201ENST00000251739 CT45A7P0DMV0 189 aa7.95□□□□□ -1.14
VPS50-201ENST00000251739 CELP19835 753 aa7.95□□□□□ -1.14
VPS50-201ENST00000251739 MAPK3P27361 379 aaPredicted RBP7.95□□□□□ -1.14
VPS50-201ENST00000251739 WNT4P56705 351 aa7.95□□□□□ -1.14
VPS50-201ENST00000251739 RPS27AP62979 156 aaKnown RBP7.95□□□□□ -1.14
VPS50-201ENST00000251739 CX3CL1P78423 397 aa7.95□□□□□ -1.14
VPS50-201ENST00000251739 QRFPP83859 136 aa7.95□□□□□ -1.14
VPS50-201ENST00000251739 UNC119Q13432 240 aa7.95□□□□□ -1.14
VPS50-201ENST00000251739 ZNF660Q6AZW8 331 aaPredicted RBP7.95□□□□□ -1.14
VPS50-201ENST00000251739 LIN54Q6MZP7 749 aa7.95□□□□□ -1.14
VPS50-201ENST00000251739 ACSM6Q6P461 480 aa7.95□□□□□ -1.14
VPS50-201ENST00000251739 CD200R1LQ6Q8B3 271 aa7.95□□□□□ -1.14
VPS50-201ENST00000251739 LRRTM1Q86UE6 522 aa7.95□□□□□ -1.14
VPS50-201ENST00000251739 TCTEX1D1Q8N7M0 179 aa7.95□□□□□ -1.14
VPS50-201ENST00000251739 MUC7Q8TAX7 377 aa7.95□□□□□ -1.14
VPS50-201ENST00000251739 CYGBQ8WWM9 190 aa7.95□□□□□ -1.14
VPS50-201ENST00000251739 DLX4Q92988 240 aaPredicted RBP7.95□□□□□ -1.14
VPS50-201ENST00000251739 GALMQ96C23 342 aa7.95□□□□□ -1.14
VPS50-201ENST00000251739 RCHY1Q96PM5 261 aa7.95□□□□□ -1.14
VPS50-201ENST00000251739 TM2D1Q9BX74 207 aa7.95□□□□□ -1.14
VPS50-201ENST00000251739 FBXL15Q9H469 300 aa7.95□□□□□ -1.14
VPS50-201ENST00000251739 PLCXD1Q9NUJ7 323 aa7.95□□□□□ -1.14
VPS50-201ENST00000251739 SLC23A1Q9UHI7 598 aa7.95□□□□□ -1.14
VPS50-201ENST00000251739 PSORS1C1Q9UIG5 152 aa7.95□□□□□ -1.14
VPS50-201ENST00000251739 FOXA2Q9Y261 457 aaPredicted RBP7.95□□□□□ -1.14
VPS50-201ENST00000251739 LRRC42Q9Y546 428 aa7.95□□□□□ -1.14
VPS50-201ENST00000251739 NUBP2Q9Y5Y2 271 aa7.95□□□□□ -1.14
VPS50-201ENST00000251739 IGHV4OR15-8A0A075B7B6 117 aa7.94□□□□□ -1.14
VPS50-201ENST00000251739 A0A087WW49 117 aa7.94□□□□□ -1.14
VPS50-201ENST00000251739 TRBV6-6A0A0A6YYG2 114 aa7.94□□□□□ -1.14
VPS50-201ENST00000251739 H0YJW9 148 aa7.94□□□□□ -1.14
VPS50-201ENST00000251739 RRHO14718 337 aa7.94□□□□□ -1.14
VPS50-201ENST00000251739 PROP1O75360 226 aa7.94□□□□□ -1.14
VPS50-201ENST00000251739 BAG2O95816 211 aa7.94□□□□□ -1.14
VPS50-201ENST00000251739 SPNP16150 400 aa7.94□□□□□ -1.14
VPS50-201ENST00000251739 HTR2CP28335 458 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms