RNA–Protein interactions for RNA: ENST00000227503.13

SF1-201, Transcript of splicing factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SF1, Length 2,850 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-201ENST00000227503 ZNF114Q8NC26 417 aa11.98□□□□□ -0.49
SF1-201ENST00000227503 CPEB3Q8NE35 698 aaKnown RBP11.98□□□□□ -0.49
SF1-201ENST00000227503 IMMP1LQ96LU5 166 aa11.98□□□□□ -0.49
SF1-201ENST00000227503 TUBG2Q9NRH3 451 aa11.98□□□□□ -0.49
SF1-201ENST00000227503 PSENENQ9NZ42 101 aa11.98□□□□□ -0.49
SF1-201ENST00000227503 FAM186AA6NE01 2351 aa11.98□□□□□ -0.49
SF1-201ENST00000227503 TRAV39A0A0B4J263 110 aa11.98□□□□□ -0.49
SF1-201ENST00000227503 CCL25O15444 150 aa11.98□□□□□ -0.49
SF1-201ENST00000227503 PDCD6O75340 191 aa11.98□□□□□ -0.49
SF1-201ENST00000227503 IFNA1P01562 189 aa11.98□□□□□ -0.49
SF1-201ENST00000227503 UMODP07911 640 aa11.98□□□□□ -0.49
SF1-201ENST00000227503 CRYGSP22914 178 aa11.98□□□□□ -0.49
SF1-201ENST00000227503 COL8A2P25067 703 aa11.98□□□□□ -0.49
SF1-201ENST00000227503 DSCR4P56555 118 aaPredicted RBP11.98□□□□□ -0.49
SF1-201ENST00000227503 LINC00310P59036 64 aa11.98□□□□□ -0.49
SF1-201ENST00000227503 RPL15P61313 204 aaKnown RBP11.98□□□□□ -0.49
SF1-201ENST00000227503 FAM27BQ5VT28 67 aa11.98□□□□□ -0.49
SF1-201ENST00000227503 TDHQ8IZJ6 230 aa11.98□□□□□ -0.49
SF1-201ENST00000227503 OR1L6Q8NGR2 347 aa11.98□□□□□ -0.49
SF1-201ENST00000227503 SAP25Q8TEE9 199 aa11.98□□□□□ -0.49
SF1-201ENST00000227503 PIGCQ92535 297 aa11.98□□□□□ -0.49
SF1-201ENST00000227503 SPTSSAQ969W0 71 aa11.98□□□□□ -0.49
SF1-201ENST00000227503 WDR54Q9H977 334 aa11.98□□□□□ -0.49
SF1-201ENST00000227503 ERRFI1Q9UJM3 462 aaPredicted RBP11.98□□□□□ -0.49
SF1-201ENST00000227503 G3V3Y1 287 aa11.97□□□□□ -0.49
SF1-201ENST00000227503 TCN2P20062 427 aa11.97□□□□□ -0.49
SF1-201ENST00000227503 CBLN1P23435 193 aa11.97□□□□□ -0.49
SF1-201ENST00000227503 MPLP40238 635 aa11.97□□□□□ -0.49
SF1-201ENST00000227503 SRPXP78539 464 aa11.97□□□□□ -0.49
SF1-201ENST00000227503 CISD2Q8N5K1 135 aaKnown RBP11.97□□□□□ -0.49
SF1-201ENST00000227503 ZNF709Q8N972 641 aa11.97□□□□□ -0.49
SF1-201ENST00000227503 EXTL1Q92935 676 aa11.97□□□□□ -0.49
SF1-201ENST00000227503 VAMP8Q9BV40 100 aa11.97□□□□□ -0.49
SF1-201ENST00000227503 ULBP2Q9BZM5 246 aa11.97□□□□□ -0.49
SF1-201ENST00000227503 SH2D2AQ9NP31 389 aa11.97□□□□□ -0.49
SF1-201ENST00000227503 FSCN3Q9NQT6 498 aa11.97□□□□□ -0.49
SF1-201ENST00000227503 YLPM1P49750 1951 aaKnown RBP11.97□□□□□ -0.49
SF1-201ENST00000227503 IGKV1-6A0A0C4DH72 117 aa11.97□□□□□ -0.49
SF1-201ENST00000227503 A0A0J9YW62 118 aa11.97□□□□□ -0.49
SF1-201ENST00000227503 TNFSF13O75888 250 aa11.97□□□□□ -0.49
SF1-201ENST00000227503 NDUFB8O95169 186 aa11.97□□□□□ -0.49
SF1-201ENST00000227503 UCP1P25874 307 aa11.97□□□□□ -0.49
SF1-201ENST00000227503 CARD18P57730 90 aa11.97□□□□□ -0.49
SF1-201ENST00000227503 NUFIP2Q7Z417 695 aaKnown RBP11.97□□□□□ -0.49
SF1-201ENST00000227503 SRXN1Q9BYN0 137 aa11.97□□□□□ -0.49
SF1-201ENST00000227503 WNT5BQ9H1J7 359 aa11.97□□□□□ -0.49
SF1-201ENST00000227503 ZNF703Q9H7S9 590 aaPredicted RBP11.97□□□□□ -0.49
SF1-201ENST00000227503 YPEL1O60688 119 aa11.97□□□□□ -0.49
SF1-201ENST00000227503 SERF1AO75920 110 aa11.97□□□□□ -0.49
SF1-201ENST00000227503 COX6A1P12074 109 aa11.97□□□□□ -0.49
SF1-201ENST00000227503 S100A7P31151 101 aa11.97□□□□□ -0.49
SF1-201ENST00000227503 PSMB3P49720 205 aa11.97□□□□□ -0.49
SF1-201ENST00000227503 COTL1Q14019 142 aa11.97□□□□□ -0.49
SF1-201ENST00000227503 OR5P3Q8WZ94 311 aa11.97□□□□□ -0.49
SF1-201ENST00000227503 SPSB1Q96BD6 273 aa11.97□□□□□ -0.49
SF1-201ENST00000227503 YPEL2Q96QA6 119 aa11.97□□□□□ -0.49
SF1-201ENST00000227503 KIAA1324LA8MWY0 1029 aaPredicted RBP11.96□□□□□ -0.49
SF1-201ENST00000227503 TNFSF11O14788 317 aa11.96□□□□□ -0.49
SF1-201ENST00000227503 PGLYRP1O75594 196 aaPredicted RBP11.96□□□□□ -0.49
SF1-201ENST00000227503 NRASP01111 189 aa11.96□□□□□ -0.49
SF1-201ENST00000227503 CXCL12P48061 93 aa11.96□□□□□ -0.49
SF1-201ENST00000227503 THBS3P49746 956 aa11.96□□□□□ -0.49
SF1-201ENST00000227503 CIB3Q96Q77 187 aaPredicted RBP11.96□□□□□ -0.49
SF1-201ENST00000227503 FREM1Q5H8C1 2179 aa11.96□□□□□ -0.5
SF1-201ENST00000227503 SYNGR3O43761 229 aa11.96□□□□□ -0.5
SF1-201ENST00000227503 NTF4P34130 210 aa11.96□□□□□ -0.5
SF1-201ENST00000227503 PLCXD3Q63HM9 321 aa11.96□□□□□ -0.5
SF1-201ENST00000227503 HLA-CQ95604 372 aa11.96□□□□□ -0.5
SF1-201ENST00000227503 CLDN23Q96B33 292 aa11.96□□□□□ -0.5
SF1-201ENST00000227503 WDR61Q9GZS3 305 aaKnown RBP11.96□□□□□ -0.5
SF1-201ENST00000227503 URB1O60287 2271 aaKnown RBP11.95□□□□□ -0.5
SF1-201ENST00000227503 NAPSAO96009 420 aa11.95□□□□□ -0.5
SF1-201ENST00000227503 PTTG1IPP53801 180 aa11.95□□□□□ -0.5
SF1-201ENST00000227503 RBM11P57052 281 aaKnown RBP11.95□□□□□ -0.5
SF1-201ENST00000227503 KRTDAPP60985 99 aa11.95□□□□□ -0.5
SF1-201ENST00000227503 PPP1CBP62140 327 aa11.95□□□□□ -0.5
SF1-201ENST00000227503 LRRC75BQ2VPJ9 315 aa11.95□□□□□ -0.5
SF1-201ENST00000227503 ASCL4Q6XD76 172 aa11.95□□□□□ -0.5
SF1-201ENST00000227503 SGMS2Q8NHU3 365 aa11.95□□□□□ -0.5
SF1-201ENST00000227503 AGMATQ9BSE5 352 aa11.95□□□□□ -0.5
SF1-201ENST00000227503 ZDHHC11Q9H8X9 412 aa11.95□□□□□ -0.5
SF1-201ENST00000227503 TMEM9BQ9NQ34 198 aa11.95□□□□□ -0.5
SF1-201ENST00000227503 ZFP30Q9Y2G7 519 aa11.95□□□□□ -0.5
SF1-201ENST00000227503 PXMP4Q9Y6I8 212 aa11.95□□□□□ -0.5
SF1-201ENST00000227503 KIAA1549Q9HCM3 1950 aa11.95□□□□□ -0.5
SF1-201ENST00000227503 SH2D1BO14796 132 aa11.95□□□□□ -0.5
SF1-201ENST00000227503 SYNGR2O43760 224 aa11.95□□□□□ -0.5
SF1-201ENST00000227503 KLF7O75840 302 aaPredicted RBP11.95□□□□□ -0.5
SF1-201ENST00000227503 SERPINE2P07093 398 aa11.95□□□□□ -0.5
SF1-201ENST00000227503 RAC1P63000 192 aa11.95□□□□□ -0.5
SF1-201ENST00000227503 TEX43Q6ZNM6 134 aa11.95□□□□□ -0.5
SF1-201ENST00000227503 CENPVQ7Z7K6 275 aaPredicted RBP11.95□□□□□ -0.5
SF1-201ENST00000227503 WDR5BQ86VZ2 330 aa11.95□□□□□ -0.5
SF1-201ENST00000227503 IL1F10Q8WWZ1 152 aa11.95□□□□□ -0.5
SF1-201ENST00000227503 HIPK2Q9H2X6 1198 aa11.95□□□□□ -0.5
SF1-201ENST00000227503 IGKV1-39P01597 117 aa11.94□□□□□ -0.5
SF1-201ENST00000227503 IGKV1D-39P04432 117 aa11.94□□□□□ -0.5
SF1-201ENST00000227503 SSR4P51571 173 aa11.94□□□□□ -0.5
SF1-201ENST00000227503 TMEM183BQ1AE95 376 aa11.94□□□□□ -0.5
SF1-201ENST00000227503 COL5A1-AS1Q5SY13 56 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms