RNA–Protein interactions for RNA: ENST00000225504.7

SUPT4H1-201, Transcript of SPT4 homolog, DSIF elongation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUPT4H1, Length 1,489 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1-201ENST00000225504 HOGA1Q86XE5 327 aa11.52□□□□□ -0.56
SUPT4H1-201ENST00000225504 TGIF2LXQ8IUE1 241 aa11.52□□□□□ -0.56
SUPT4H1-201ENST00000225504 SNX29P2Q8IUI4 249 aa11.52□□□□□ -0.56
SUPT4H1-201ENST00000225504 OR8H3Q8N146 312 aa11.52□□□□□ -0.56
SUPT4H1-201ENST00000225504 OR10J5Q8NHC4 309 aa11.52□□□□□ -0.56
SUPT4H1-201ENST00000225504 CCDC59Q9P031 241 aaKnown RBP11.52□□□□□ -0.56
SUPT4H1-201ENST00000225504 ANXA10Q9UJ72 324 aa11.52□□□□□ -0.56
SUPT4H1-201ENST00000225504 STAB1Q9NY15 2570 aa11.52□□□□□ -0.56
SUPT4H1-201ENST00000225504 SMIM31A0A1B0GVY4 71 aa11.51□□□□□ -0.57
SUPT4H1-201ENST00000225504 J3QRK9 145 aa11.51□□□□□ -0.57
SUPT4H1-201ENST00000225504 ITGB1BP1O14713 200 aa11.51□□□□□ -0.57
SUPT4H1-201ENST00000225504 LANCL1O43813 399 aa11.51□□□□□ -0.57
SUPT4H1-201ENST00000225504 OR8U9P0C7N5 309 aa11.51□□□□□ -0.57
SUPT4H1-201ENST00000225504 RAG2P55895 527 aa11.51□□□□□ -0.57
SUPT4H1-201ENST00000225504 LINC00205P59089 165 aa11.51□□□□□ -0.57
SUPT4H1-201ENST00000225504 BLCAPP62952 87 aa11.51□□□□□ -0.57
SUPT4H1-201ENST00000225504 HABP2Q14520 560 aaPredicted RBP11.51□□□□□ -0.57
SUPT4H1-201ENST00000225504 AWAT1Q58HT5 328 aa11.51□□□□□ -0.57
SUPT4H1-201ENST00000225504 DHRS7BQ6IAN0 325 aaPredicted RBP11.51□□□□□ -0.57
SUPT4H1-201ENST00000225504 CNIH2Q6PI25 160 aa11.51□□□□□ -0.57
SUPT4H1-201ENST00000225504 ZNF833PQ6ZTB9 187 aa11.51□□□□□ -0.57
SUPT4H1-201ENST00000225504 THNSL2Q86YJ6 484 aa11.51□□□□□ -0.57
SUPT4H1-201ENST00000225504 LAX1Q8IWV1 398 aa11.51□□□□□ -0.57
SUPT4H1-201ENST00000225504 H1FOOQ8IZA3 346 aaPredicted RBP11.51□□□□□ -0.57
SUPT4H1-201ENST00000225504 BEST4Q8NFU0 473 aa11.51□□□□□ -0.57
SUPT4H1-201ENST00000225504 OR8U1Q8NH10 309 aa11.51□□□□□ -0.57
SUPT4H1-201ENST00000225504 SNAPC3Q92966 411 aa11.51□□□□□ -0.57
SUPT4H1-201ENST00000225504 MRPL20Q9BYC9 149 aaKnown RBP11.51□□□□□ -0.57
SUPT4H1-201ENST00000225504 EXTL2Q9UBQ6 330 aa11.51□□□□□ -0.57
SUPT4H1-201ENST00000225504 RSL24D1Q9UHA3 163 aaKnown RBP11.51□□□□□ -0.57
SUPT4H1-201ENST00000225504 SIGLEC9Q9Y336 463 aa11.51□□□□□ -0.57
SUPT4H1-201ENST00000225504 DPPA5A6NC42 116 aa11.51□□□□□ -0.57
SUPT4H1-201ENST00000225504 RGS5O15539 181 aa11.51□□□□□ -0.57
SUPT4H1-201ENST00000225504 NDUFA7O95182 113 aa11.51□□□□□ -0.57
SUPT4H1-201ENST00000225504 IGKV1D-33P01593 117 aa11.51□□□□□ -0.57
SUPT4H1-201ENST00000225504 IGKV1-33P01594 117 aa11.51□□□□□ -0.57
SUPT4H1-201ENST00000225504 FAM106CPP0CH98 169 aa11.51□□□□□ -0.57
SUPT4H1-201ENST00000225504 NFYAP23511 347 aaPredicted RBP11.51□□□□□ -0.57
SUPT4H1-201ENST00000225504 PRSS3P35030 304 aa11.51□□□□□ -0.57
SUPT4H1-201ENST00000225504 ARHGDIBP52566 201 aa11.51□□□□□ -0.57
SUPT4H1-201ENST00000225504 RPL15P61313 204 aaKnown RBP11.51□□□□□ -0.57
SUPT4H1-201ENST00000225504 HES1Q14469 280 aa11.51□□□□□ -0.57
SUPT4H1-201ENST00000225504 LINC01006Q8NI28 216 aa11.51□□□□□ -0.57
SUPT4H1-201ENST00000225504 ABHD1Q96SE0 405 aa11.51□□□□□ -0.57
SUPT4H1-201ENST00000225504 NABP2Q9BQ15 211 aa11.51□□□□□ -0.57
SUPT4H1-201ENST00000225504 DCUN1D5Q9BTE7 237 aa11.51□□□□□ -0.57
SUPT4H1-201ENST00000225504 PITPNC1Q9UKF7 332 aa11.51□□□□□ -0.57
SUPT4H1-201ENST00000225504 SH2D7A6NKC9 451 aaPredicted RBP11.5□□□□□ -0.57
SUPT4H1-201ENST00000225504 RAB29O14966 203 aa11.5□□□□□ -0.57
SUPT4H1-201ENST00000225504 TSPAN9O75954 239 aa11.5□□□□□ -0.57
SUPT4H1-201ENST00000225504 AMY1AP04745 511 aa11.5□□□□□ -0.57
SUPT4H1-201ENST00000225504 AMY2AP04746 511 aa11.5□□□□□ -0.57
SUPT4H1-201ENST00000225504 COMPP49747 757 aaPredicted RBP11.5□□□□□ -0.57
SUPT4H1-201ENST00000225504 FOXL1Q12952 345 aa11.5□□□□□ -0.57
SUPT4H1-201ENST00000225504 FOXB2Q5VYV0 432 aa11.5□□□□□ -0.57
SUPT4H1-201ENST00000225504 LYSMD2Q8IV50 215 aa11.5□□□□□ -0.57
SUPT4H1-201ENST00000225504 DRAXINQ8NBI3 349 aaPredicted RBP11.5□□□□□ -0.57
SUPT4H1-201ENST00000225504 GPX8Q8TED1 209 aa11.5□□□□□ -0.57
SUPT4H1-201ENST00000225504 EDARADDQ8WWZ3 215 aa11.5□□□□□ -0.57
SUPT4H1-201ENST00000225504 C5orf30Q96GV9 206 aa11.5□□□□□ -0.57
SUPT4H1-201ENST00000225504 EAF1Q96JC9 268 aaPredicted RBP11.5□□□□□ -0.57
SUPT4H1-201ENST00000225504 RITA1Q96K30 269 aa11.5□□□□□ -0.57
SUPT4H1-201ENST00000225504 RBM14Q96PK6 669 aaKnown RBP11.5□□□□□ -0.57
SUPT4H1-201ENST00000225504 GINS4Q9BRT9 223 aa11.5□□□□□ -0.57
SUPT4H1-201ENST00000225504 NXF2Q9GZY0 626 aaKnown RBP11.5□□□□□ -0.57
SUPT4H1-201ENST00000225504 PIPOXQ9P0Z9 390 aa11.5□□□□□ -0.57
SUPT4H1-201ENST00000225504 DIRAS3O95661 229 aa11.49□□□□□ -0.57
SUPT4H1-201ENST00000225504 CT45A6P0DMU7 189 aa11.49□□□□□ -0.57
SUPT4H1-201ENST00000225504 CT45A5P0DMU8 189 aa11.49□□□□□ -0.57
SUPT4H1-201ENST00000225504 CT45A7P0DMV0 189 aa11.49□□□□□ -0.57
SUPT4H1-201ENST00000225504 CD1BP29016 333 aa11.49□□□□□ -0.57
SUPT4H1-201ENST00000225504 CBX5P45973 191 aa11.49□□□□□ -0.57
SUPT4H1-201ENST00000225504 EBI3Q14213 229 aa11.49□□□□□ -0.57
SUPT4H1-201ENST00000225504 RNASE12Q5GAN4 147 aaKnown RBP11.49□□□□□ -0.57
SUPT4H1-201ENST00000225504 GLDNQ6ZMI3 551 aaPredicted RBP11.49□□□□□ -0.57
SUPT4H1-201ENST00000225504 LIAT1Q6ZQX7 453 aa11.49□□□□□ -0.57
SUPT4H1-201ENST00000225504 SPATA3Q8NHX4 192 aa11.49□□□□□ -0.57
SUPT4H1-201ENST00000225504 MCFD2Q8NI22 146 aa11.49□□□□□ -0.57
SUPT4H1-201ENST00000225504 SLC25A33Q9BSK2 321 aa11.49□□□□□ -0.57
SUPT4H1-201ENST00000225504 C6orf62Q9GZU0 229 aaPredicted RBP11.49□□□□□ -0.57
SUPT4H1-201ENST00000225504 C16orf95Q9H693 158 aa11.49□□□□□ -0.57
SUPT4H1-201ENST00000225504 ZNF702PQ9H963 129 aa11.49□□□□□ -0.57
SUPT4H1-201ENST00000225504 ANAPC10Q9UM13 185 aa11.49□□□□□ -0.57
SUPT4H1-201ENST00000225504 IGKV1D-13A0A0B4J2D9 117 aa11.48□□□□□ -0.57
SUPT4H1-201ENST00000225504 ZNF701M0R085 212 aaPredicted RBP11.48□□□□□ -0.57
SUPT4H1-201ENST00000225504 OR2F2O95006 317 aa11.48□□□□□ -0.57
SUPT4H1-201ENST00000225504 CTXN2P0C2S0 81 aa11.48□□□□□ -0.57
SUPT4H1-201ENST00000225504 IGKV1-13P0DP09 117 aa11.48□□□□□ -0.57
SUPT4H1-201ENST00000225504 TMEM11P17152 192 aa11.48□□□□□ -0.57
SUPT4H1-201ENST00000225504 NAT1P18440 290 aa11.48□□□□□ -0.57
SUPT4H1-201ENST00000225504 TNFSF8P32971 234 aa11.48□□□□□ -0.57
SUPT4H1-201ENST00000225504 GPR12P47775 334 aa11.48□□□□□ -0.57
SUPT4H1-201ENST00000225504 SRSF4Q08170 494 aaKnown RBP11.48□□□□□ -0.57
SUPT4H1-201ENST00000225504 LSAMPQ13449 338 aa11.48□□□□□ -0.57
SUPT4H1-201ENST00000225504 C12orf54Q6X4T0 127 aa11.48□□□□□ -0.57
SUPT4H1-201ENST00000225504 Q8N6K4 173 aa11.48□□□□□ -0.57
SUPT4H1-201ENST00000225504 OR4F5Q8NH21 305 aa11.48□□□□□ -0.57
SUPT4H1-201ENST00000225504 S1PR3Q99500 378 aa11.48□□□□□ -0.57
SUPT4H1-201ENST00000225504 RAB18Q9NP72 206 aa11.48□□□□□ -0.57
SUPT4H1-201ENST00000225504 IFT46Q9NQC8 304 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms