RNA–Protein interactions for RNA: ENST00000221922.10

CCDC9-201, Transcript of coiled-coil domain containing 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC9, Length 2,093 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-201ENST00000221922 LOC102723971A0A1B0GUV8 181 aa18.67■□□□□ 0.58
CCDC9-201ENST00000221922 CXorf65A6NEN9 183 aa18.67■□□□□ 0.58
CCDC9-201ENST00000221922 ZNF727A8MUV8 499 aa18.67■□□□□ 0.58
CCDC9-201ENST00000221922 H3BP45 60 aa18.67■□□□□ 0.58
CCDC9-201ENST00000221922 AGFG2O95081 481 aa18.67■□□□□ 0.58
CCDC9-201ENST00000221922 TMEM267Q0VDI3 215 aaPredicted RBP18.67■□□□□ 0.58
CCDC9-201ENST00000221922 P2RY6Q15077 328 aa18.67■□□□□ 0.58
CCDC9-201ENST00000221922 STARD4Q96DR4 205 aa18.67■□□□□ 0.58
CCDC9-201ENST00000221922 NIPSNAP3BQ9BS92 247 aa18.67■□□□□ 0.58
CCDC9-201ENST00000221922 SIRT7Q9NRC8 400 aa18.67■□□□□ 0.58
CCDC9-201ENST00000221922 RBM7Q9Y580 266 aaKnown RBP18.67■□□□□ 0.58
CCDC9-201ENST00000221922 SYNGR2O43760 224 aa18.67■□□□□ 0.58
CCDC9-201ENST00000221922 CLN5O75503 358 aa18.67■□□□□ 0.58
CCDC9-201ENST00000221922 IZUMO4Q1ZYL8 232 aa18.67■□□□□ 0.58
CCDC9-201ENST00000221922 C1orf174Q8IYL3 243 aa18.67■□□□□ 0.58
CCDC9-201ENST00000221922 PRR18Q8N4B5 295 aa18.67■□□□□ 0.58
CCDC9-201ENST00000221922 LIN7CQ9NUP9 197 aaKnown RBP18.67■□□□□ 0.58
CCDC9-201ENST00000221922 CACNG5Q9UF02 275 aa18.67■□□□□ 0.58
CCDC9-201ENST00000221922 TMEM30CPA0ZSE6 113 aa18.66■□□□□ 0.58
CCDC9-201ENST00000221922 MLNRO43193 412 aa18.66■□□□□ 0.58
CCDC9-201ENST00000221922 PPIHO43447 177 aaKnown RBP18.66■□□□□ 0.58
CCDC9-201ENST00000221922 KITLGP21583 273 aa18.66■□□□□ 0.58
CCDC9-201ENST00000221922 CEBPGP53567 150 aa18.66■□□□□ 0.58
CCDC9-201ENST00000221922 ELOBQ15370 118 aa18.66■□□□□ 0.58
CCDC9-201ENST00000221922 CXorf67Q86X51 503 aaPredicted RBP18.66■□□□□ 0.58
CCDC9-201ENST00000221922 ZNF610Q8N9Z0 462 aa18.66■□□□□ 0.58
CCDC9-201ENST00000221922 RNASE11Q8TAA1 199 aaKnown RBP18.66■□□□□ 0.58
CCDC9-201ENST00000221922 ZNF71Q9NQZ8 489 aaPredicted RBP18.66■□□□□ 0.58
CCDC9-201ENST00000221922 KCNIP1Q9NZI2 227 aa18.66■□□□□ 0.58
CCDC9-201ENST00000221922 LOC400499M0QZD8 3231 aa18.66■□□□□ 0.58
CCDC9-201ENST00000221922 TRAV39A0A0B4J263 110 aa18.65■□□□□ 0.58
CCDC9-201ENST00000221922 TIMM8AO60220 97 aaPredicted RBP18.65■□□□□ 0.58
CCDC9-201ENST00000221922 IGKV1-5P01602 117 aa18.65■□□□□ 0.58
CCDC9-201ENST00000221922 IGLV1-44P01699 117 aa18.65■□□□□ 0.58
CCDC9-201ENST00000221922 FABP1P07148 127 aa18.65■□□□□ 0.58
CCDC9-201ENST00000221922 CD200P41217 278 aa18.65■□□□□ 0.58
CCDC9-201ENST00000221922 RPS10P46783 165 aaKnown RBP18.65■□□□□ 0.58
CCDC9-201ENST00000221922 SEM1Q6ZVN7 128 aa18.65■□□□□ 0.58
CCDC9-201ENST00000221922 PSMG3Q9BT73 122 aaPredicted RBP18.65■□□□□ 0.58
CCDC9-201ENST00000221922 GSN-AS1Q9NRJ2 163 aa18.65■□□□□ 0.58
CCDC9-201ENST00000221922 OR14J1Q9UGF5 321 aa18.65■□□□□ 0.58
CCDC9-201ENST00000221922 KLK10O43240 276 aa18.65■□□□□ 0.58
CCDC9-201ENST00000221922 CECR9P0C854 216 aa18.65■□□□□ 0.58
CCDC9-201ENST00000221922 ZNF718Q3SXZ3 478 aa18.65■□□□□ 0.58
CCDC9-201ENST00000221922 ZNF585BQ52M93 769 aa18.65■□□□□ 0.58
CCDC9-201ENST00000221922 SLC25A24Q6NUK1 477 aa18.65■□□□□ 0.58
CCDC9-201ENST00000221922 Q8WTZ3 238 aa18.65■□□□□ 0.58
CCDC9-201ENST00000221922 MBD3L1Q8WWY6 194 aa18.65■□□□□ 0.58
CCDC9-201ENST00000221922 NIT2Q9NQR4 276 aa18.65■□□□□ 0.58
CCDC9-201ENST00000221922 RPRMQ9NS64 109 aa18.65■□□□□ 0.58
CCDC9-201ENST00000221922 RNF150Q9ULK6 438 aa18.65■□□□□ 0.58
CCDC9-201ENST00000221922 KCNS2Q9ULS6 477 aa18.65■□□□□ 0.58
CCDC9-201ENST00000221922 MUC6Q6W4X9 2439 aa18.65■□□□□ 0.58
CCDC9-201ENST00000221922 PRRC2CQ9Y520 2896 aaKnown RBP18.64■□□□□ 0.58
CCDC9-201ENST00000221922 GLIPR1P48060 266 aa18.64■□□□□ 0.57
CCDC9-201ENST00000221922 ZNF525Q8N782 197 aa18.64■□□□□ 0.57
CCDC9-201ENST00000221922 SCGB1C1Q8TD33 95 aa18.64■□□□□ 0.57
CCDC9-201ENST00000221922 OPN3Q9H1Y3 402 aaPredicted RBP18.64■□□□□ 0.57
CCDC9-201ENST00000221922 TMPRSS5Q9H3S3 457 aa18.64■□□□□ 0.57
CCDC9-201ENST00000221922 MMP24Q9Y5R2 645 aa18.64■□□□□ 0.57
CCDC9-201ENST00000221922 ZFHX4Q86UP3 3567 aa18.64■□□□□ 0.57
CCDC9-201ENST00000221922 IGHV3-64DA0A0J9YX35 117 aa18.64■□□□□ 0.57
CCDC9-201ENST00000221922 RNF212BA8MTL3 300 aa18.64■□□□□ 0.57
CCDC9-201ENST00000221922 C1QTNF9BB2RNN3 333 aa18.64■□□□□ 0.57
CCDC9-201ENST00000221922 CEACAM6P40199 344 aa18.64■□□□□ 0.57
CCDC9-201ENST00000221922 FAM169BQ8N8A8 192 aa18.64■□□□□ 0.57
CCDC9-201ENST00000221922 RSG1Q9BU20 258 aa18.64■□□□□ 0.57
CCDC9-201ENST00000221922 PSENENQ9NZ42 101 aa18.64■□□□□ 0.57
CCDC9-201ENST00000221922 CISD1Q9NZ45 108 aaKnown RBP18.64■□□□□ 0.57
CCDC9-201ENST00000221922 PPP1R3CQ9UQK1 317 aa18.64■□□□□ 0.57
CCDC9-201ENST00000221922 ZFHX2Q9C0A1 2572 aaPredicted RBP18.63■□□□□ 0.57
CCDC9-201ENST00000221922 RIF1Q5UIP0 2472 aaKnown RBP18.63■□□□□ 0.57
CCDC9-201ENST00000221922 B4DEV8 164 aa18.63■□□□□ 0.57
CCDC9-201ENST00000221922 HOXA5P20719 270 aa18.63■□□□□ 0.57
CCDC9-201ENST00000221922 GCH1P30793 250 aa18.63■□□□□ 0.57
CCDC9-201ENST00000221922 ARL16Q0P5N6 197 aa18.63■□□□□ 0.57
CCDC9-201ENST00000221922 KIAA0141Q14154 515 aaPredicted RBP18.63■□□□□ 0.57
CCDC9-201ENST00000221922 SLC35E4Q6ICL7 350 aa18.63■□□□□ 0.57
CCDC9-201ENST00000221922 BEND4Q6ZU67 534 aa18.63■□□□□ 0.57
CCDC9-201ENST00000221922 BHLHA15Q7RTS1 189 aaPredicted RBP18.63■□□□□ 0.57
CCDC9-201ENST00000221922 HAPLN4Q86UW8 402 aa18.63■□□□□ 0.57
CCDC9-201ENST00000221922 C11orf53Q8IXP5 236 aa18.63■□□□□ 0.57
CCDC9-201ENST00000221922 PRR7Q8TB68 274 aa18.63■□□□□ 0.57
CCDC9-201ENST00000221922 INTS1Q8N201 2190 aaKnown RBP18.63■□□□□ 0.57
CCDC9-201ENST00000221922 CXCL1P09341 107 aa18.62■□□□□ 0.57
CCDC9-201ENST00000221922 ERVFRD-1P60508 538 aa18.62■□□□□ 0.57
CCDC9-201ENST00000221922 MZT1Q08AG7 82 aa18.62■□□□□ 0.57
CCDC9-201ENST00000221922 LRRC75BQ2VPJ9 315 aa18.62■□□□□ 0.57
CCDC9-201ENST00000221922 MBNL2Q5VZF2 373 aaKnown RBP18.62■□□□□ 0.57
CCDC9-201ENST00000221922 RBMXL3Q8N7X1 1067 aaKnown RBP18.62■□□□□ 0.57
CCDC9-201ENST00000221922 PARD6GQ9BYG4 376 aaPredicted RBP18.62■□□□□ 0.57
CCDC9-201ENST00000221922 OR51M1Q9H341 326 aa18.62■□□□□ 0.57
CCDC9-201ENST00000221922 GNG13Q9P2W3 67 aa18.62■□□□□ 0.57
CCDC9-201ENST00000221922 OR5H1A6NKK0 313 aa18.62■□□□□ 0.57
CCDC9-201ENST00000221922 LINC00587B1AMM8 73 aa18.62■□□□□ 0.57
CCDC9-201ENST00000221922 SERF2P84101 59 aa18.62■□□□□ 0.57
CCDC9-201ENST00000221922 FAM90A2PQ658T7 463 aa18.62■□□□□ 0.57
CCDC9-201ENST00000221922 ZNF343Q6P1L6 599 aa18.62■□□□□ 0.57
CCDC9-201ENST00000221922 ACP7Q6ZNF0 438 aa18.62■□□□□ 0.57
CCDC9-201ENST00000221922 ZBTB34Q8NCN2 500 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms