RNA–Protein interactions for RNA: ENST00000220509.9

VPS18-201, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS18, Length 3,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-201ENST00000220509 NOTCH3Q9UM47 2321 aa9.13□□□□□ -0.95
VPS18-201ENST00000220509 SIRPB1O00241 398 aa9.13□□□□□ -0.95
VPS18-201ENST00000220509 DEGS1O15121 323 aa9.13□□□□□ -0.95
VPS18-201ENST00000220509 TRAF3IP2O43734 574 aaPredicted RBP9.13□□□□□ -0.95
VPS18-201ENST00000220509 CD1AP06126 327 aa9.13□□□□□ -0.95
VPS18-201ENST00000220509 MMP9P14780 707 aa9.13□□□□□ -0.95
VPS18-201ENST00000220509 PLAURQ03405 335 aa9.13□□□□□ -0.95
VPS18-201ENST00000220509 PCOLCEQ15113 449 aa9.13□□□□□ -0.95
VPS18-201ENST00000220509 C10orf91Q5T1B1 145 aa9.13□□□□□ -0.95
VPS18-201ENST00000220509 LGI3Q8N145 548 aa9.13□□□□□ -0.95
VPS18-201ENST00000220509 ZNF709Q8N972 641 aa9.13□□□□□ -0.95
VPS18-201ENST00000220509 NTNG2Q96CW9 530 aa9.13□□□□□ -0.95
VPS18-201ENST00000220509 NMES1Q9C002 83 aa9.13□□□□□ -0.95
VPS18-201ENST00000220509 STRAPQ9Y3F4 350 aaKnown RBP9.13□□□□□ -0.95
VPS18-201ENST00000220509 LHFPL6Q9Y693 200 aa9.13□□□□□ -0.95
VPS18-201ENST00000220509 KIAA1549LQ6ZVL6 1849 aa9.13□□□□□ -0.95
VPS18-201ENST00000220509 PGA4P0DJD7 388 aa9.12□□□□□ -0.95
VPS18-201ENST00000220509 SULT1A2P50226 295 aa9.12□□□□□ -0.95
VPS18-201ENST00000220509 ERVS71-1P61550 626 aa9.12□□□□□ -0.95
VPS18-201ENST00000220509 TOMM20LQ6UXN7 152 aa9.12□□□□□ -0.95
VPS18-201ENST00000220509 ZNF429Q86V71 674 aa9.12□□□□□ -0.95
VPS18-201ENST00000220509 ZDHHC23Q8IYP9 409 aa9.12□□□□□ -0.95
VPS18-201ENST00000220509 LRRC75AQ8NAA5 344 aa9.12□□□□□ -0.95
VPS18-201ENST00000220509 GPR27Q9NS67 375 aa9.12□□□□□ -0.95
VPS18-201ENST00000220509 H3BQ15 152 aa9.12□□□□□ -0.95
VPS18-201ENST00000220509 TUSC2O75896 110 aa9.12□□□□□ -0.95
VPS18-201ENST00000220509 ZNF880Q6PDB4 577 aa9.12□□□□□ -0.95
VPS18-201ENST00000220509 LCN15Q6UWW0 184 aa9.12□□□□□ -0.95
VPS18-201ENST00000220509 TMEM18Q96B42 140 aa9.12□□□□□ -0.95
VPS18-201ENST00000220509 MUCL1Q96DR8 90 aa9.12□□□□□ -0.95
VPS18-201ENST00000220509 PITPNC1Q9UKF7 332 aa9.12□□□□□ -0.95
VPS18-201ENST00000220509 A0A1W2PPV4 95 aa9.12□□□□□ -0.95
VPS18-201ENST00000220509 HELTA6NFD8 242 aa9.12□□□□□ -0.95
VPS18-201ENST00000220509 CORTO00230 105 aa9.12□□□□□ -0.95
VPS18-201ENST00000220509 SP9P0CG40 484 aa9.12□□□□□ -0.95
VPS18-201ENST00000220509 FUT6P51993 359 aa9.12□□□□□ -0.95
VPS18-201ENST00000220509 DLK1P80370 383 aa9.12□□□□□ -0.95
VPS18-201ENST00000220509 NAAAQ02083 359 aa9.12□□□□□ -0.95
VPS18-201ENST00000220509 TRIP6Q15654 476 aaKnown RBP9.12□□□□□ -0.95
VPS18-201ENST00000220509 RNF144BQ7Z419 303 aa9.12□□□□□ -0.95
VPS18-201ENST00000220509 NIT1Q86X76 327 aa9.12□□□□□ -0.95
VPS18-201ENST00000220509 RAB39BQ96DA2 213 aa9.12□□□□□ -0.95
VPS18-201ENST00000220509 DAZAP1Q96EP5 407 aaKnown RBP9.12□□□□□ -0.95
VPS18-201ENST00000220509 MIEN1Q9BRT3 115 aa9.12□□□□□ -0.95
VPS18-201ENST00000220509 HDHD3Q9BSH5 251 aaPredicted RBP9.12□□□□□ -0.95
VPS18-201ENST00000220509 FAM234AQ9H0X4 552 aa9.12□□□□□ -0.95
VPS18-201ENST00000220509 RAB18Q9NP72 206 aa9.12□□□□□ -0.95
VPS18-201ENST00000220509 WDFY3Q8IZQ1 3526 aa9.12□□□□□ -0.95
VPS18-201ENST00000220509 SNAI2O43623 268 aa9.11□□□□□ -0.95
VPS18-201ENST00000220509 CDS2O95674 445 aa9.11□□□□□ -0.95
VPS18-201ENST00000220509 ZNF260Q3ZCT1 412 aa9.11□□□□□ -0.95
VPS18-201ENST00000220509 FNDC7Q5VTL7 733 aa9.11□□□□□ -0.95
VPS18-201ENST00000220509 GBGT1Q8N5D6 347 aa9.11□□□□□ -0.95
VPS18-201ENST00000220509 FRZBQ92765 325 aa9.11□□□□□ -0.95
VPS18-201ENST00000220509 TAAR5O14804 337 aa9.11□□□□□ -0.95
VPS18-201ENST00000220509 PGA5P0DJD9 388 aa9.11□□□□□ -0.95
VPS18-201ENST00000220509 HKR1P10072 659 aa9.11□□□□□ -0.95
VPS18-201ENST00000220509 HINT1P49773 126 aaPredicted RBP9.11□□□□□ -0.95
VPS18-201ENST00000220509 ADIRFQ15847 76 aa9.11□□□□□ -0.95
VPS18-201ENST00000220509 ZNF766Q5HY98 468 aa9.11□□□□□ -0.95
VPS18-201ENST00000220509 HEPN1Q6WQI6 88 aa9.11□□□□□ -0.95
VPS18-201ENST00000220509 GTF2H5Q6ZYL4 71 aa9.11□□□□□ -0.95
VPS18-201ENST00000220509 CXorf67Q86X51 503 aaPredicted RBP9.11□□□□□ -0.95
VPS18-201ENST00000220509 OR4D5Q8NGN0 318 aa9.11□□□□□ -0.95
VPS18-201ENST00000220509 TMEM37Q8WXS4 190 aa9.11□□□□□ -0.95
VPS18-201ENST00000220509 SDSLQ96GA7 329 aa9.11□□□□□ -0.95
VPS18-201ENST00000220509 GNG12Q9UBI6 72 aa9.11□□□□□ -0.95
VPS18-201ENST00000220509 SPTBN4Q9H254 2564 aa9.11□□□□□ -0.95
VPS18-201ENST00000220509 SPAARA0A1B0GVQ0 90 aa9.11□□□□□ -0.95
VPS18-201ENST00000220509 TOX4O94842 621 aa9.11□□□□□ -0.95
VPS18-201ENST00000220509 COX6A1P12074 109 aa9.11□□□□□ -0.95
VPS18-201ENST00000220509 CEACAM1P13688 526 aa9.11□□□□□ -0.95
VPS18-201ENST00000220509 LGALS7P47929 136 aa9.11□□□□□ -0.95
VPS18-201ENST00000220509 RPS23P62266 143 aaKnown RBP9.11□□□□□ -0.95
VPS18-201ENST00000220509 SNIP1Q8TAD8 396 aaKnown RBP9.11□□□□□ -0.95
VPS18-201ENST00000220509 HES7Q9BYE0 225 aa9.11□□□□□ -0.95
VPS18-201ENST00000220509 ZNF586Q9NXT0 402 aa9.11□□□□□ -0.95
VPS18-201ENST00000220509 PSG11Q9UQ72 335 aa9.11□□□□□ -0.95
VPS18-201ENST00000220509 FAM24AA6NFZ4 105 aa9.1□□□□□ -0.95
VPS18-201ENST00000220509 HMGB3O15347 200 aaKnown RBP9.1□□□□□ -0.95
VPS18-201ENST00000220509 SAP30O75446 220 aa9.1□□□□□ -0.95
VPS18-201ENST00000220509 LYZL6O75951 148 aa9.1□□□□□ -0.95
VPS18-201ENST00000220509 EIF3IQ13347 325 aaKnown RBP9.1□□□□□ -0.95
VPS18-201ENST00000220509 SRSF7Q16629 238 aaKnown RBP eCLIP9.1□□□□□ -0.95
VPS18-201ENST00000220509 PHYHD1Q5SRE7 291 aa9.1□□□□□ -0.95
VPS18-201ENST00000220509 STPG4Q8N801 248 aa9.1□□□□□ -0.95
VPS18-201ENST00000220509 CYB561D1Q8N8Q1 229 aa9.1□□□□□ -0.95
VPS18-201ENST00000220509 APOBEC3DQ96AK3 386 aaPredicted RBP9.1□□□□□ -0.95
VPS18-201ENST00000220509 GPHA2Q96T91 129 aa9.1□□□□□ -0.95
VPS18-201ENST00000220509 ABHD14AQ9BUJ0 271 aa9.1□□□□□ -0.95
VPS18-201ENST00000220509 PLEKHA2Q9HB19 425 aa9.1□□□□□ -0.95
VPS18-201ENST00000220509 PARP11Q9NR21 331 aa9.1□□□□□ -0.95
VPS18-201ENST00000220509 TMED3Q9Y3Q3 217 aa9.1□□□□□ -0.95
VPS18-201ENST00000220509 WSB1Q9Y6I7 421 aa9.1□□□□□ -0.95
VPS18-201ENST00000220509 KIR2DS1A0A191URI9 304 aa9.1□□□□□ -0.95
VPS18-201ENST00000220509 ST8SIA3O43173 380 aa9.1□□□□□ -0.95
VPS18-201ENST00000220509 FUT3P21217 361 aa9.1□□□□□ -0.95
VPS18-201ENST00000220509 CA6P23280 308 aa9.1□□□□□ -0.95
VPS18-201ENST00000220509 KIR2DS4P43632 304 aa9.1□□□□□ -0.95
VPS18-201ENST00000220509 EDDM3BP56851 147 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms