RNA–Protein interactions for RNA: ENST00000215917.11

SRRD-201, Transcript of SRR1 domain containing, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRRD, Length 4,020 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRD-201ENST00000215917 SUCLG1P53597 346 aaKnown RBP12.85□□□□□ -0.35
SRRD-201ENST00000215917 CLDN15P56746 228 aa12.85□□□□□ -0.35
SRRD-201ENST00000215917 PTX4Q96A99 478 aa12.85□□□□□ -0.35
SRRD-201ENST00000215917 SMIM8Q96KF7 97 aa12.85□□□□□ -0.35
SRRD-201ENST00000215917 IMMP2LQ96T52 175 aa12.85□□□□□ -0.35
SRRD-201ENST00000215917 Q9N2K0 584 aa12.85□□□□□ -0.35
SRRD-201ENST00000215917 CYB561P49447 251 aa12.85□□□□□ -0.35
SRRD-201ENST00000215917 C3AR1Q16581 482 aa12.85□□□□□ -0.35
SRRD-201ENST00000215917 TPRX1Q8N7U7 411 aa12.85□□□□□ -0.35
SRRD-201ENST00000215917 TAAR9Q96RI9 348 aa12.85□□□□□ -0.35
SRRD-201ENST00000215917 CLN8Q9UBY8 286 aa12.85□□□□□ -0.35
SRRD-201ENST00000215917 C11orf94C9JXX5 98 aa12.84□□□□□ -0.35
SRRD-201ENST00000215917 COL10A1Q03692 680 aa12.84□□□□□ -0.35
SRRD-201ENST00000215917 COTL1Q14019 142 aa12.84□□□□□ -0.35
SRRD-201ENST00000215917 LYPD6Q86Y78 171 aa12.84□□□□□ -0.35
SRRD-201ENST00000215917 KDF1Q8NAX2 398 aaPredicted RBP12.84□□□□□ -0.35
SRRD-201ENST00000215917 C14orf144Q96I85 54 aa12.84□□□□□ -0.35
SRRD-201ENST00000215917 CIB3Q96Q77 187 aaPredicted RBP12.84□□□□□ -0.35
SRRD-201ENST00000215917 IGSF23A1L1A6 192 aa12.84□□□□□ -0.35
SRRD-201ENST00000215917 LRP5LA4QPB2 252 aa12.84□□□□□ -0.35
SRRD-201ENST00000215917 CDX4O14627 284 aaPredicted RBP12.84□□□□□ -0.35
SRRD-201ENST00000215917 ZNF253O75346 499 aa12.84□□□□□ -0.35
SRRD-201ENST00000215917 VAMP5O95183 116 aa12.84□□□□□ -0.35
SRRD-201ENST00000215917 RPLP1P05386 114 aaKnown RBP12.84□□□□□ -0.35
SRRD-201ENST00000215917 HIST1H1BP16401 226 aaKnown RBP12.84□□□□□ -0.35
SRRD-201ENST00000215917 TPPP2P59282 170 aa12.84□□□□□ -0.35
SRRD-201ENST00000215917 CTAG1AP78358 180 aa12.84□□□□□ -0.35
SRRD-201ENST00000215917 SPEM2Q0P670 501 aa12.84□□□□□ -0.35
SRRD-201ENST00000215917 ALKBH6Q3KRA9 238 aa12.84□□□□□ -0.35
SRRD-201ENST00000215917 ZIC4Q8N9L1 334 aa12.84□□□□□ -0.35
SRRD-201ENST00000215917 TUBA4BQ9H853 241 aa12.84□□□□□ -0.35
SRRD-201ENST00000215917 SRD5A3Q9H8P0 318 aa12.84□□□□□ -0.35
SRRD-201ENST00000215917 WFDC1Q9HC57 220 aa12.84□□□□□ -0.35
SRRD-201ENST00000215917 TMEM9BQ9NQ34 198 aa12.84□□□□□ -0.35
SRRD-201ENST00000215917 FZR1Q9UM11 496 aa12.84□□□□□ -0.35
SRRD-201ENST00000215917 B4E171 279 aa12.84□□□□□ -0.35
SRRD-201ENST00000215917 FGF16O43320 207 aa12.84□□□□□ -0.35
SRRD-201ENST00000215917 SYNGR2O43760 224 aa12.84□□□□□ -0.35
SRRD-201ENST00000215917 CD59P13987 128 aa12.84□□□□□ -0.35
SRRD-201ENST00000215917 THBS4P35443 961 aa12.84□□□□□ -0.35
SRRD-201ENST00000215917 TSPAN7P41732 249 aa12.84□□□□□ -0.35
SRRD-201ENST00000215917 VAX1Q5SQQ9 334 aa12.84□□□□□ -0.35
SRRD-201ENST00000215917 C1orf147Q96MC9 270 aaPredicted RBP12.84□□□□□ -0.35
SRRD-201ENST00000215917 DEPPQ9NTK1 212 aa12.84□□□□□ -0.35
SRRD-201ENST00000215917 PGPEP1LA6NFU8 196 aa12.83□□□□□ -0.36
SRRD-201ENST00000215917 ETV2O00321 342 aaPredicted RBP12.83□□□□□ -0.36
SRRD-201ENST00000215917 HSPB1P04792 205 aaKnown RBP12.83□□□□□ -0.36
SRRD-201ENST00000215917 FCGR3AP08637 254 aa12.83□□□□□ -0.36
SRRD-201ENST00000215917 FAM157CP0CG43 387 aa12.83□□□□□ -0.36
SRRD-201ENST00000215917 LSM6P62312 80 aaKnown RBP12.83□□□□□ -0.36
SRRD-201ENST00000215917 P2RY6Q15077 328 aa12.83□□□□□ -0.36
SRRD-201ENST00000215917 RNASEKQ6P5S7 137 aaKnown RBP12.83□□□□□ -0.36
SRRD-201ENST00000215917 CALHM1Q8IU99 346 aa12.83□□□□□ -0.36
SRRD-201ENST00000215917 FGFBP3Q8TAT2 258 aa12.83□□□□□ -0.36
SRRD-201ENST00000215917 STARD4Q96DR4 205 aa12.83□□□□□ -0.36
SRRD-201ENST00000215917 FAM173AQ9BQD7 235 aa12.83□□□□□ -0.36
SRRD-201ENST00000215917 ZNF331Q9NQX6 463 aaPredicted RBP12.83□□□□□ -0.36
SRRD-201ENST00000215917 LAMA5O15230 3695 aa12.83□□□□□ -0.36
SRRD-201ENST00000215917 LRRC3CA6NJW4 275 aa12.83□□□□□ -0.36
SRRD-201ENST00000215917 NDUFB4O95168 129 aa12.83□□□□□ -0.36
SRRD-201ENST00000215917 CSN3P07498 182 aa12.83□□□□□ -0.36
SRRD-201ENST00000215917 BCL2P10415 239 aa12.83□□□□□ -0.36
SRRD-201ENST00000215917 CEACAM6P40199 344 aa12.83□□□□□ -0.36
SRRD-201ENST00000215917 TAS2R60P59551 318 aa12.83□□□□□ -0.36
SRRD-201ENST00000215917 PINLYPA6NC86 204 aa12.83□□□□□ -0.36
SRRD-201ENST00000215917 CELA3AP09093 270 aa12.83□□□□□ -0.36
SRRD-201ENST00000215917 VDAC1P21796 283 aa12.83□□□□□ -0.36
SRRD-201ENST00000215917 CFPP27918 469 aa12.83□□□□□ -0.36
SRRD-201ENST00000215917 RSPO1Q2MKA7 263 aaPredicted RBP12.83□□□□□ -0.36
SRRD-201ENST00000215917 FOXB1Q99853 325 aa12.83□□□□□ -0.36
SRRD-201ENST00000215917 C17orf112F2Z3M2 114 aa12.82□□□□□ -0.36
SRRD-201ENST00000215917 GAPDHP04406 335 aaKnown RBP12.82□□□□□ -0.36
SRRD-201ENST00000215917 NPBWR2P48146 333 aa12.82□□□□□ -0.36
SRRD-201ENST00000215917 CATR1Q13166 79 aa12.82□□□□□ -0.36
SRRD-201ENST00000215917 OR1F12Q8NHA8 337 aa12.82□□□□□ -0.36
SRRD-201ENST00000215917 GJE1A6NN92 205 aa12.82□□□□□ -0.36
SRRD-201ENST00000215917 HGFACQ04756 655 aa12.82□□□□□ -0.36
SRRD-201ENST00000215917 ATP1A1-AS1Q5TC04 95 aa12.82□□□□□ -0.36
SRRD-201ENST00000215917 NABP1Q96AH0 204 aa12.82□□□□□ -0.36
SRRD-201ENST00000215917 SLC35D1Q9NTN3 355 aa12.82□□□□□ -0.36
SRRD-201ENST00000215917 NAT8Q9UHE5 227 aa12.82□□□□□ -0.36
SRRD-201ENST00000215917 MELTFP08582 738 aa12.82□□□□□ -0.36
SRRD-201ENST00000215917 MDH2P40926 338 aaKnown RBP12.82□□□□□ -0.36
SRRD-201ENST00000215917 RAC3P60763 192 aa12.82□□□□□ -0.36
SRRD-201ENST00000215917 SUPT4H1P63272 117 aaKnown RBP12.82□□□□□ -0.36
SRRD-201ENST00000215917 HERPUD1Q15011 391 aa12.82□□□□□ -0.36
SRRD-201ENST00000215917 Q56UQ5 140 aa12.82□□□□□ -0.36
SRRD-201ENST00000215917 TMEM164Q5U3C3 297 aa12.82□□□□□ -0.36
SRRD-201ENST00000215917 VAX2Q9UIW0 290 aa12.82□□□□□ -0.36
SRRD-201ENST00000215917 BOD1L1Q8NFC6 3051 aa12.81□□□□□ -0.36
SRRD-201ENST00000215917 OR3A1P47881 315 aa12.81□□□□□ -0.36
SRRD-201ENST00000215917 TMEM183BQ1AE95 376 aa12.81□□□□□ -0.36
SRRD-201ENST00000215917 MARS2Q96GW9 593 aaKnown RBP12.81□□□□□ -0.36
SRRD-201ENST00000215917 CHST5Q9GZS9 411 aa12.81□□□□□ -0.36
SRRD-201ENST00000215917 SNURFLB1AK76 121 aa12.81□□□□□ -0.36
SRRD-201ENST00000215917 MT-CO2P00403 227 aa12.81□□□□□ -0.36
SRRD-201ENST00000215917 IL2RAP01589 272 aa12.81□□□□□ -0.36
SRRD-201ENST00000215917 G6PCP35575 357 aa12.81□□□□□ -0.36
SRRD-201ENST00000215917 GNG10P50151 68 aa12.81□□□□□ -0.36
SRRD-201ENST00000215917 CNN1P51911 297 aaKnown RBP12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms