RNA–Protein interactions for RNA: ENST00000209875.8

CBX5-201, Transcript of chromobox 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX5, Length 11,528 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5-201ENST00000209875 SRSF7Q16629 238 aaKnown RBP eCLIP5.03□□□□□ -1.6
CBX5-201ENST00000209875 MOB3AQ96BX8 217 aa5.03□□□□□ -1.6
CBX5-201ENST00000209875 CDX2Q99626 313 aaPredicted RBP5.03□□□□□ -1.6
CBX5-201ENST00000209875 NRIP2Q9BQI9 281 aa5.03□□□□□ -1.6
CBX5-201ENST00000209875 MIXL1Q9H2W2 232 aa5.03□□□□□ -1.6
CBX5-201ENST00000209875 ING1Q9UK53 422 aaPredicted RBP5.03□□□□□ -1.6
CBX5-201ENST00000209875 DLX1P56177 255 aa5.03□□□□□ -1.6
CBX5-201ENST00000209875 MEF2BQ02080 365 aaPredicted RBP5.03□□□□□ -1.6
CBX5-201ENST00000209875 OLIG3Q7RTU3 272 aa5.03□□□□□ -1.6
CBX5-201ENST00000209875 ELOVL1Q9BW60 279 aa5.03□□□□□ -1.6
CBX5-201ENST00000209875 MRPL32Q9BYC8 188 aaKnown RBP5.03□□□□□ -1.6
CBX5-201ENST00000209875 CLN8Q9UBY8 286 aa5.03□□□□□ -1.6
CBX5-201ENST00000209875 UBR3Q6ZT12 1888 aa5.03□□□□□ -1.6
CBX5-201ENST00000209875 A0A0B4J293 547 aa5.03□□□□□ -1.6
CBX5-201ENST00000209875 TRGV8A0A0C4DH27 118 aa5.03□□□□□ -1.6
CBX5-201ENST00000209875 RAB29O14966 203 aa5.03□□□□□ -1.6
CBX5-201ENST00000209875 OR2J3O76001 311 aa5.03□□□□□ -1.6
CBX5-201ENST00000209875 RPL30P62888 115 aaKnown RBP5.03□□□□□ -1.6
CBX5-201ENST00000209875 TMEM136Q6ZRR5 245 aa5.03□□□□□ -1.6
CBX5-201ENST00000209875 SPNS2Q8IVW8 549 aa5.03□□□□□ -1.6
CBX5-201ENST00000209875 OR5R1Q8NH85 324 aa5.03□□□□□ -1.6
CBX5-201ENST00000209875 PRO1933Q9H354 126 aa5.03□□□□□ -1.6
CBX5-201ENST00000209875 WIPI2Q9Y4P8 454 aa5.03□□□□□ -1.6
CBX5-201ENST00000209875 IGHV5-10-1A0A0J9YXX1 117 aa5.03□□□□□ -1.6
CBX5-201ENST00000209875 HPXP02790 462 aa5.03□□□□□ -1.6
CBX5-201ENST00000209875 IZUMO4Q1ZYL8 232 aa5.03□□□□□ -1.6
CBX5-201ENST00000209875 SPATA45Q537H7 98 aa5.03□□□□□ -1.6
CBX5-201ENST00000209875 C11orf42Q8N5U0 333 aa5.03□□□□□ -1.6
CBX5-201ENST00000209875 TMEM116Q8NCL8 245 aa5.03□□□□□ -1.6
CBX5-201ENST00000209875 MRPL30Q8TCC3 161 aaKnown RBP5.03□□□□□ -1.6
CBX5-201ENST00000209875 SOX21Q9Y651 276 aaPredicted RBP5.03□□□□□ -1.6
CBX5-201ENST00000209875 SH2D7A6NKC9 451 aaPredicted RBP5.03□□□□□ -1.6
CBX5-201ENST00000209875 NXPH3O95157 252 aa5.03□□□□□ -1.6
CBX5-201ENST00000209875 PRSS1P07477 247 aa5.03□□□□□ -1.6
CBX5-201ENST00000209875 OR4A8P0C604 315 aa5.03□□□□□ -1.6
CBX5-201ENST00000209875 ZFP36L2P47974 494 aaKnown RBP5.03□□□□□ -1.6
CBX5-201ENST00000209875 LSM11P83369 360 aaKnown RBP eCLIP5.03□□□□□ -1.64e-6■□□□□ 10.9
CBX5-201ENST00000209875 C9orf152Q5JTZ5 239 aa5.03□□□□□ -1.6
CBX5-201ENST00000209875 SFRP2Q96HF1 295 aa5.03□□□□□ -1.6
CBX5-201ENST00000209875 PLA2G2FQ9BZM2 168 aa5.03□□□□□ -1.6
CBX5-201ENST00000209875 FAM60AQ9NP50 221 aa5.03□□□□□ -1.6
CBX5-201ENST00000209875 FUT9Q9Y231 359 aa5.03□□□□□ -1.6
CBX5-201ENST00000209875 IGLV3-12A0A075B6K2 115 aa5.03□□□□□ -1.6
CBX5-201ENST00000209875 TMEM250H0YL14 139 aa5.03□□□□□ -1.6
CBX5-201ENST00000209875 SCGB1A1P11684 91 aa5.03□□□□□ -1.6
CBX5-201ENST00000209875 CA7P43166 264 aa5.03□□□□□ -1.6
CBX5-201ENST00000209875 CBLN2Q8IUK8 224 aa5.03□□□□□ -1.6
CBX5-201ENST00000209875 Q8WTZ3 238 aa5.03□□□□□ -1.6
CBX5-201ENST00000209875 FLYWCH2Q96CP2 140 aaKnown RBP5.03□□□□□ -1.6
CBX5-201ENST00000209875 GALNT14Q96FL9 552 aa5.03□□□□□ -1.6
CBX5-201ENST00000209875 ZNF729A6NN14 1252 aaPredicted RBP5.03□□□□□ -1.6
CBX5-201ENST00000209875 PLA2G10O15496 165 aa5.03□□□□□ -1.6
CBX5-201ENST00000209875 SOD3P08294 240 aa5.03□□□□□ -1.6
CBX5-201ENST00000209875 ZNF658BQ4V348 819 aaPredicted RBP5.03□□□□□ -1.6
CBX5-201ENST00000209875 TGIF2LYQ8IUE0 185 aa5.03□□□□□ -1.6
CBX5-201ENST00000209875 OR1P1Q8NH06 330 aa5.03□□□□□ -1.6
CBX5-201ENST00000209875 AQP3Q92482 292 aa5.03□□□□□ -1.6
CBX5-201ENST00000209875 GPR27Q9NS67 375 aa5.03□□□□□ -1.6
CBX5-201ENST00000209875 KCNMB2Q9Y691 235 aa5.03□□□□□ -1.6
CBX5-201ENST00000209875 CACNA1AO00555 2505 aa5.03□□□□□ -1.6
CBX5-201ENST00000209875 A0A1W2PS18 150 aa5.03□□□□□ -1.6
CBX5-201ENST00000209875 FAM90A9PA6NNJ1 464 aa5.03□□□□□ -1.6
CBX5-201ENST00000209875 TCF21O43680 179 aa5.03□□□□□ -1.6
CBX5-201ENST00000209875 CD8AP01732 235 aa5.03□□□□□ -1.6
CBX5-201ENST00000209875 RELBQ01201 579 aa5.03□□□□□ -1.6
CBX5-201ENST00000209875 PMVKQ15126 192 aa5.03□□□□□ -1.6
CBX5-201ENST00000209875 HES3Q5TGS1 186 aa5.03□□□□□ -1.6
CBX5-201ENST00000209875 WDFY1Q8IWB7 410 aa5.03□□□□□ -1.6
CBX5-201ENST00000209875 LINC00469Q8N7U9 141 aa5.03□□□□□ -1.6
CBX5-201ENST00000209875 NPVFQ9HCQ7 196 aa5.03□□□□□ -1.6
CBX5-201ENST00000209875 DOK5Q9P104 306 aa5.03□□□□□ -1.6
CBX5-201ENST00000209875 TNS1Q9HBL0 1735 aaKnown RBP5.03□□□□□ -1.6
CBX5-201ENST00000209875 ZNF716A6NP11 495 aa5.03□□□□□ -1.6
CBX5-201ENST00000209875 LINC01565O15544 149 aa5.03□□□□□ -1.6
CBX5-201ENST00000209875 NMBP08949 121 aa5.03□□□□□ -1.6
CBX5-201ENST00000209875 ACP1P24666 158 aa5.03□□□□□ -1.6
CBX5-201ENST00000209875 RPS11P62280 158 aaKnown RBP eCLIP5.03□□□□□ -1.6
CBX5-201ENST00000209875 RNFT1Q5M7Z0 435 aa5.03□□□□□ -1.6
CBX5-201ENST00000209875 TMEM186Q96B77 213 aa5.03□□□□□ -1.6
CBX5-201ENST00000209875 TBX15Q96SF7 602 aa5.03□□□□□ -1.6
CBX5-201ENST00000209875 AKIRIN1Q9H9L7 192 aaPredicted RBP5.03□□□□□ -1.6
CBX5-201ENST00000209875 MOB4Q9Y3A3 225 aa5.03□□□□□ -1.6
CBX5-201ENST00000209875 CST7O76096 145 aa5.02□□□□□ -1.61
CBX5-201ENST00000209875 IGKV3-11P04433 115 aa5.02□□□□□ -1.61
CBX5-201ENST00000209875 TYMSP04818 313 aa5.02□□□□□ -1.61
CBX5-201ENST00000209875 TWIST1Q15672 202 aa5.02□□□□□ -1.61
CBX5-201ENST00000209875 PAPPA-AS1Q5QFB9 102 aa5.02□□□□□ -1.61
CBX5-201ENST00000209875 FAM166AQ6J272 317 aa5.02□□□□□ -1.61
CBX5-201ENST00000209875 VHLLQ6RSH7 139 aa5.02□□□□□ -1.61
CBX5-201ENST00000209875 IGHV1-45A0A0A0MS14 117 aa5.02□□□□□ -1.61
CBX5-201ENST00000209875 OR2W5A6NFC9 320 aa5.02□□□□□ -1.61
CBX5-201ENST00000209875 SIGLEC5O15389 551 aa5.02□□□□□ -1.61
CBX5-201ENST00000209875 A0A087WWC5 75 aa5.02□□□□□ -1.61
CBX5-201ENST00000209875 IGKV3D-11A0A0A0MRZ8 115 aa5.02□□□□□ -1.61
CBX5-201ENST00000209875 MUC1P15941 1255 aaPredicted RBP5.02□□□□□ -1.61
CBX5-201ENST00000209875 FMODQ06828 376 aa5.02□□□□□ -1.61
CBX5-201ENST00000209875 NHLRC3Q5JS37 347 aa5.02□□□□□ -1.61
CBX5-201ENST00000209875 OR2D2Q9H210 308 aa5.02□□□□□ -1.61
CBX5-201ENST00000209875 LPAR2Q9HBW0 351 aa5.02□□□□□ -1.61
CBX5-201ENST00000209875 RGPD4Q7Z3J3 1758 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms