RNA–Protein interactions for RNA: ENST00000162749.6

TNFRSF1A-201, Transcript of TNF receptor superfamily member 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1A, Length 2,223 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-201ENST00000162749 CBLN4Q9NTU7 201 aa16.33■□□□□ 0.2
TNFRSF1A-201ENST00000162749 C3orf85A0A1B0GTC6 90 aa16.33■□□□□ 0.2
TNFRSF1A-201ENST00000162749 PHF1O43189 567 aaPredicted RBP16.33■□□□□ 0.2
TNFRSF1A-201ENST00000162749 SPINT2O43291 252 aa16.33■□□□□ 0.2
TNFRSF1A-201ENST00000162749 SOD3P08294 240 aa16.33■□□□□ 0.2
TNFRSF1A-201ENST00000162749 OR8U9P0C7N5 309 aa16.33■□□□□ 0.2
TNFRSF1A-201ENST00000162749 C11orf71Q6IPW1 123 aa16.33■□□□□ 0.2
TNFRSF1A-201ENST00000162749 STPG2Q8N412 459 aa16.33■□□□□ 0.2
TNFRSF1A-201ENST00000162749 FGFRL1Q8N441 504 aa16.33■□□□□ 0.2
TNFRSF1A-201ENST00000162749 ZNF843Q8N446 348 aa16.33■□□□□ 0.2
TNFRSF1A-201ENST00000162749 OR8U1Q8NH10 309 aa16.33■□□□□ 0.2
TNFRSF1A-201ENST00000162749 C14orf79Q96F83 325 aa16.33■□□□□ 0.2
TNFRSF1A-201ENST00000162749 OR2S2Q9NQN1 319 aa16.33■□□□□ 0.2
TNFRSF1A-201ENST00000162749 OR6C3Q9NZP0 311 aa16.33■□□□□ 0.2
TNFRSF1A-201ENST00000162749 FBXO9Q9UK97 447 aaPredicted RBP16.33■□□□□ 0.2
TNFRSF1A-201ENST00000162749 NKX6-3A6NJ46 265 aa16.32■□□□□ 0.2
TNFRSF1A-201ENST00000162749 KRBOX1C9JBD0 128 aa16.32■□□□□ 0.2
TNFRSF1A-201ENST00000162749 TNFSF12O43508 249 aa16.32■□□□□ 0.2
TNFRSF1A-201ENST00000162749 IAH1Q2TAA2 248 aaPredicted RBP16.32■□□□□ 0.2
TNFRSF1A-201ENST00000162749 HFEQ30201 348 aa16.32■□□□□ 0.2
TNFRSF1A-201ENST00000162749 LRTM2Q8N967 370 aa16.32■□□□□ 0.2
TNFRSF1A-201ENST00000162749 NINJ1Q92982 152 aa16.32■□□□□ 0.2
TNFRSF1A-201ENST00000162749 DANCRP0C864 163 aa16.31■□□□□ 0.2
TNFRSF1A-201ENST00000162749 PPP1CCP36873 323 aaKnown RBP16.31■□□□□ 0.2
TNFRSF1A-201ENST00000162749 HTD2P86397 168 aa16.31■□□□□ 0.2
TNFRSF1A-201ENST00000162749 GGNBP1Q5YKI7 109 aa16.31■□□□□ 0.2
TNFRSF1A-201ENST00000162749 LIAT1Q6ZQX7 453 aa16.31■□□□□ 0.2
TNFRSF1A-201ENST00000162749 RBM7Q9Y580 266 aaKnown RBP16.31■□□□□ 0.2
TNFRSF1A-201ENST00000162749 IGHV3-43A0A0B4J1X8 118 aa16.31■□□□□ 0.2
TNFRSF1A-201ENST00000162749 TNFRSF13BO14836 293 aaPredicted RBP16.31■□□□□ 0.2
TNFRSF1A-201ENST00000162749 PGLYRP1O75594 196 aaPredicted RBP16.31■□□□□ 0.2
TNFRSF1A-201ENST00000162749 IGHV3-43DP0DP04 118 aa16.31■□□□□ 0.2
TNFRSF1A-201ENST00000162749 S100A10P60903 97 aa16.31■□□□□ 0.2
TNFRSF1A-201ENST00000162749 LHFPL5Q8TAF8 219 aa16.31■□□□□ 0.2
TNFRSF1A-201ENST00000162749 TMEM222Q9H0R3 208 aa16.31■□□□□ 0.2
TNFRSF1A-201ENST00000162749 LYNX1G3V0Z9 82 aa16.3■□□□□ 0.2
TNFRSF1A-201ENST00000162749 FCN3O75636 299 aa16.3■□□□□ 0.2
TNFRSF1A-201ENST00000162749 C1QL1O75973 258 aa16.3■□□□□ 0.2
TNFRSF1A-201ENST00000162749 CGB3P0DN86 165 aa16.3■□□□□ 0.2
TNFRSF1A-201ENST00000162749 CGB7P0DN87 165 aa16.3■□□□□ 0.2
TNFRSF1A-201ENST00000162749 LYNX1P0DP58 116 aa16.3■□□□□ 0.2
TNFRSF1A-201ENST00000162749 TPT1P13693 172 aaKnown RBP16.3■□□□□ 0.2
TNFRSF1A-201ENST00000162749 TAGLNQ01995 201 aaKnown RBP16.3■□□□□ 0.2
TNFRSF1A-201ENST00000162749 TCF23Q7RTU1 214 aa16.3■□□□□ 0.2
TNFRSF1A-201ENST00000162749 BAP18Q8IXM2 172 aa16.3■□□□□ 0.2
TNFRSF1A-201ENST00000162749 MALRD1Q5VYJ5 2156 aa16.3■□□□□ 0.2
TNFRSF1A-201ENST00000162749 COL8A2P25067 703 aa16.3■□□□□ 0.2
TNFRSF1A-201ENST00000162749 DTX2Q86UW9 622 aa16.3■□□□□ 0.2
TNFRSF1A-201ENST00000162749 FOXRED2Q8IWF2 684 aa16.3■□□□□ 0.2
TNFRSF1A-201ENST00000162749 SREK1IP1Q8N9Q2 155 aaPredicted RBP16.3■□□□□ 0.2
TNFRSF1A-201ENST00000162749 SLC25A10Q9UBX3 287 aaPredicted RBP16.3■□□□□ 0.2
TNFRSF1A-201ENST00000162749 KMT2BQ9UMN6 2715 aaPredicted RBP16.29■□□□□ 0.2
TNFRSF1A-201ENST00000162749 FGF16O43320 207 aa16.29■□□□□ 0.2
TNFRSF1A-201ENST00000162749 PET100P0DJ07 73 aa16.29■□□□□ 0.2
TNFRSF1A-201ENST00000162749 LYPD2Q6UXB3 125 aa16.29■□□□□ 0.2
TNFRSF1A-201ENST00000162749 CALYQ9NYX4 217 aa16.29■□□□□ 0.2
TNFRSF1A-201ENST00000162749 KCNS2Q9ULS6 477 aa16.29■□□□□ 0.2
TNFRSF1A-201ENST00000162749 F2RL2O00254 374 aa16.29■□□□□ 0.2
TNFRSF1A-201ENST00000162749 HKR1P10072 659 aa16.29■□□□□ 0.2
TNFRSF1A-201ENST00000162749 OMGP23515 440 aa16.29■□□□□ 0.2
TNFRSF1A-201ENST00000162749 F2RP25116 425 aa16.29■□□□□ 0.2
TNFRSF1A-201ENST00000162749 S100GP29377 79 aa16.29■□□□□ 0.2
TNFRSF1A-201ENST00000162749 LTC4SQ16873 150 aa16.29■□□□□ 0.2
TNFRSF1A-201ENST00000162749 C17orf58Q2M2W7 97 aa16.29■□□□□ 0.2
TNFRSF1A-201ENST00000162749 MEX3BQ6ZN04 569 aaKnown RBP16.29■□□□□ 0.2
TNFRSF1A-201ENST00000162749 LYZL2Q7Z4W2 148 aa16.29■□□□□ 0.2
TNFRSF1A-201ENST00000162749 LGI3Q8N145 548 aa16.29■□□□□ 0.2
TNFRSF1A-201ENST00000162749 DRAM1Q8N682 238 aa16.29■□□□□ 0.2
TNFRSF1A-201ENST00000162749 AKR1E2Q96JD6 320 aa16.29■□□□□ 0.2
TNFRSF1A-201ENST00000162749 C18orf12Q96KH6 178 aa16.29■□□□□ 0.2
TNFRSF1A-201ENST00000162749 RAB1BQ9H0U4 201 aa16.29■□□□□ 0.2
TNFRSF1A-201ENST00000162749 OR2D2Q9H210 308 aa16.29■□□□□ 0.2
TNFRSF1A-201ENST00000162749 TRGV10A0A0A0MS01 117 aa16.28■□□□□ 0.2
TNFRSF1A-201ENST00000162749 ADAM20O43506 726 aa16.28■□□□□ 0.2
TNFRSF1A-201ENST00000162749 RNF224P0DH78 156 aa16.28■□□□□ 0.2
TNFRSF1A-201ENST00000162749 NDUFB7P17568 137 aa16.28■□□□□ 0.2
TNFRSF1A-201ENST00000162749 LOXL3P58215 753 aa16.28■□□□□ 0.2
TNFRSF1A-201ENST00000162749 OR1S2Q8NGQ3 325 aa16.28■□□□□ 0.2
TNFRSF1A-201ENST00000162749 TAS2R3Q9NYW6 316 aa16.28■□□□□ 0.2
TNFRSF1A-201ENST00000162749 JPT1Q9UK76 154 aa16.28■□□□□ 0.2
TNFRSF1A-201ENST00000162749 RALYQ9UKM9 306 aaKnown RBP16.28■□□□□ 0.2
TNFRSF1A-201ENST00000162749 UBE2J1Q9Y385 318 aaPredicted RBP16.28■□□□□ 0.2
TNFRSF1A-201ENST00000162749 H0Y980 276 aa16.27■□□□□ 0.2
TNFRSF1A-201ENST00000162749 IFNA21P01568 189 aa16.27■□□□□ 0.2
TNFRSF1A-201ENST00000162749 ZNF645Q8N7E2 425 aa16.27■□□□□ 0.2
TNFRSF1A-201ENST00000162749 SLC35G3Q8N808 338 aa16.27■□□□□ 0.2
TNFRSF1A-201ENST00000162749 OR51H1Q8NH63 302 aa16.27■□□□□ 0.2
TNFRSF1A-201ENST00000162749 MS4A7Q9GZW8 240 aaPredicted RBP16.27■□□□□ 0.2
TNFRSF1A-201ENST00000162749 GNG12Q9UBI6 72 aa16.27■□□□□ 0.2
TNFRSF1A-201ENST00000162749 KAAG1Q9UBP8 84 aa16.27■□□□□ 0.2
TNFRSF1A-201ENST00000162749 CTSZQ9UBR2 303 aa16.27■□□□□ 0.2
TNFRSF1A-201ENST00000162749 RNF150Q9ULK6 438 aa16.27■□□□□ 0.2
TNFRSF1A-201ENST00000162749 LAMP3Q9UQV4 416 aa16.27■□□□□ 0.2
TNFRSF1A-201ENST00000162749 KBTBD11-OT1A0A1B0GTJ5 212 aa16.27■□□□□ 0.19
TNFRSF1A-201ENST00000162749 UCP1P25874 307 aa16.27■□□□□ 0.19
TNFRSF1A-201ENST00000162749 TMEM268Q5VZI3 342 aa16.27■□□□□ 0.19
TNFRSF1A-201ENST00000162749 TMED6Q8WW62 240 aa16.27■□□□□ 0.19
TNFRSF1A-201ENST00000162749 TMEM56Q96MV1 263 aa16.27■□□□□ 0.19
TNFRSF1A-201ENST00000162749 AGMATQ9BSE5 352 aa16.27■□□□□ 0.19
TNFRSF1A-201ENST00000162749 CLN8Q9UBY8 286 aa16.27■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms