RNA–Protein interactions for RNA: ENST00000013807.9

ERCC1-201, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 1,278 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-201ENST00000013807 MYF6P23409 242 aa12.32□□□□□ -0.44
ERCC1-201ENST00000013807 MC5RP33032 325 aa12.32□□□□□ -0.44
ERCC1-201ENST00000013807 INSL4Q14641 139 aa12.32□□□□□ -0.44
ERCC1-201ENST00000013807 RCN1Q15293 331 aa12.32□□□□□ -0.44
ERCC1-201ENST00000013807 FAM27D1Q5T7N8 215 aa12.32□□□□□ -0.44
ERCC1-201ENST00000013807 TCTEX1D1Q8N7M0 179 aa12.32□□□□□ -0.44
ERCC1-201ENST00000013807 OR5AN1Q8NGI8 311 aa12.32□□□□□ -0.44
ERCC1-201ENST00000013807 MND1Q9BWT6 205 aa12.32□□□□□ -0.44
ERCC1-201ENST00000013807 GNB4Q9HAV0 340 aa12.32□□□□□ -0.44
ERCC1-201ENST00000013807 STEAP1Q9UHE8 339 aa12.32□□□□□ -0.44
ERCC1-201ENST00000013807 SLC23A1Q9UHI7 598 aa12.32□□□□□ -0.44
ERCC1-201ENST00000013807 ZNF256Q9Y2P7 627 aaPredicted RBP12.32□□□□□ -0.44
ERCC1-201ENST00000013807 NUBP2Q9Y5Y2 271 aa12.32□□□□□ -0.44
ERCC1-201ENST00000013807 WSB1Q9Y6I7 421 aa12.32□□□□□ -0.44
ERCC1-201ENST00000013807 U3KQK5 164 aa12.32□□□□□ -0.44
ERCC1-201ENST00000013807 RBBP9O75884 186 aa12.31□□□□□ -0.44
ERCC1-201ENST00000013807 UCHL1P09936 223 aa12.31□□□□□ -0.44
ERCC1-201ENST00000013807 CT45A6P0DMU7 189 aa12.31□□□□□ -0.44
ERCC1-201ENST00000013807 CT45A5P0DMU8 189 aa12.31□□□□□ -0.44
ERCC1-201ENST00000013807 CT45A7P0DMV0 189 aa12.31□□□□□ -0.44
ERCC1-201ENST00000013807 BLVRBP30043 206 aaPredicted RBP12.31□□□□□ -0.44
ERCC1-201ENST00000013807 ECI1P42126 302 aa12.31□□□□□ -0.44
ERCC1-201ENST00000013807 SPHARQ15513 63 aa12.31□□□□□ -0.44
ERCC1-201ENST00000013807 ZNF260Q3ZCT1 412 aa12.31□□□□□ -0.44
ERCC1-201ENST00000013807 OR10K2Q6IF99 312 aa12.31□□□□□ -0.44
ERCC1-201ENST00000013807 CD200R1LQ6Q8B3 271 aa12.31□□□□□ -0.44
ERCC1-201ENST00000013807 MOB1BQ7L9L4 216 aa12.31□□□□□ -0.44
ERCC1-201ENST00000013807 ZNF429Q86V71 674 aa12.31□□□□□ -0.44
ERCC1-201ENST00000013807 PRR25Q96S07 402 aa12.31□□□□□ -0.44
ERCC1-201ENST00000013807 NICN1Q9BSH3 213 aa12.31□□□□□ -0.44
ERCC1-201ENST00000013807 TPSG1Q9NRR2 321 aa12.31□□□□□ -0.44
ERCC1-201ENST00000013807 KIAA1456Q9P272 454 aa12.31□□□□□ -0.44
ERCC1-201ENST00000013807 HSF4Q9ULV5 492 aa12.31□□□□□ -0.44
ERCC1-201ENST00000013807 TNCP24821 2201 aa12.3□□□□□ -0.44
ERCC1-201ENST00000013807 RRHO14718 337 aa12.3□□□□□ -0.44
ERCC1-201ENST00000013807 SOX15O60248 233 aa12.3□□□□□ -0.44
ERCC1-201ENST00000013807 GNB1P62873 340 aa12.3□□□□□ -0.44
ERCC1-201ENST00000013807 NDPQ00604 133 aa12.3□□□□□ -0.44
ERCC1-201ENST00000013807 GABPB1Q06547 395 aaPredicted RBP12.3□□□□□ -0.44
ERCC1-201ENST00000013807 AKIRIN2Q53H80 203 aa12.3□□□□□ -0.44
ERCC1-201ENST00000013807 OR6M1Q8NGM8 313 aa12.3□□□□□ -0.44
ERCC1-201ENST00000013807 PTX4Q96A99 478 aa12.3□□□□□ -0.44
ERCC1-201ENST00000013807 LPAR5Q9H1C0 372 aa12.3□□□□□ -0.44
ERCC1-201ENST00000013807 PARP11Q9NR21 331 aa12.3□□□□□ -0.44
ERCC1-201ENST00000013807 MGAT4AQ9UM21 535 aa12.3□□□□□ -0.44
ERCC1-201ENST00000013807 FBXO7Q9Y3I1 522 aa12.3□□□□□ -0.44
ERCC1-201ENST00000013807 A0A0A6YYD4 124 aa12.29□□□□□ -0.44
ERCC1-201ENST00000013807 FOXI3A8MTJ6 420 aaPredicted RBP12.29□□□□□ -0.44
ERCC1-201ENST00000013807 H0YJW9 148 aa12.29□□□□□ -0.44
ERCC1-201ENST00000013807 PROP1O75360 226 aa12.29□□□□□ -0.44
ERCC1-201ENST00000013807 EGR2P11161 476 aaPredicted RBP12.29□□□□□ -0.44
ERCC1-201ENST00000013807 CX3CL1P78423 397 aa12.29□□□□□ -0.44
ERCC1-201ENST00000013807 IRF3Q14653 427 aa12.29□□□□□ -0.44
ERCC1-201ENST00000013807 HSD17B12Q53GQ0 312 aa12.29□□□□□ -0.44
ERCC1-201ENST00000013807 RBM48Q5RL73 367 aaKnown RBP12.29□□□□□ -0.44
ERCC1-201ENST00000013807 FAM131AQ6UXB0 335 aa12.29□□□□□ -0.44
ERCC1-201ENST00000013807 CEACAM19Q7Z692 300 aa12.29□□□□□ -0.44
ERCC1-201ENST00000013807 IL1F10Q8WWZ1 152 aa12.29□□□□□ -0.44
ERCC1-201ENST00000013807 TOLLIPQ9H0E2 274 aa12.29□□□□□ -0.44
ERCC1-201ENST00000013807 PLEKHJ1Q9NW61 149 aa12.29□□□□□ -0.44
ERCC1-201ENST00000013807 ST8SIA5O15466 376 aa12.28□□□□□ -0.44
ERCC1-201ENST00000013807 ZBTB25P24278 435 aa12.28□□□□□ -0.44
ERCC1-201ENST00000013807 TMEM267Q0VDI3 215 aaPredicted RBP12.28□□□□□ -0.44
ERCC1-201ENST00000013807 PYHIN1Q6K0P9 492 aa12.28□□□□□ -0.44
ERCC1-201ENST00000013807 ZNF562Q6V9R5 426 aa12.28□□□□□ -0.44
ERCC1-201ENST00000013807 TMEM91Q6ZNR0 172 aa12.28□□□□□ -0.44
ERCC1-201ENST00000013807 EDARADDQ8WWZ3 215 aa12.28□□□□□ -0.44
ERCC1-201ENST00000013807 DCUN1D4Q92564 292 aa12.28□□□□□ -0.44
ERCC1-201ENST00000013807 TMED9Q9BVK6 235 aa12.28□□□□□ -0.44
ERCC1-201ENST00000013807 FOXA2Q9Y261 457 aaPredicted RBP12.28□□□□□ -0.44
ERCC1-201ENST00000013807 WASHC3Q9Y3C0 194 aa12.28□□□□□ -0.44
ERCC1-201ENST00000013807 FCN1O00602 326 aa12.27□□□□□ -0.45
ERCC1-201ENST00000013807 SLC17A2O00624 439 aa12.27□□□□□ -0.45
ERCC1-201ENST00000013807 OVOL1O14753 267 aa12.27□□□□□ -0.45
ERCC1-201ENST00000013807 TMEM50BP56557 158 aa12.27□□□□□ -0.45
ERCC1-201ENST00000013807 TPBGQ13641 420 aa12.27□□□□□ -0.45
ERCC1-201ENST00000013807 RPL39P5Q59GN2 51 aa12.27□□□□□ -0.45
ERCC1-201ENST00000013807 GFI1Q99684 422 aa12.27□□□□□ -0.45
ERCC1-201ENST00000013807 URM1Q9BTM9 101 aaKnown RBP12.27□□□□□ -0.45
ERCC1-201ENST00000013807 PARP12Q9H0J9 701 aaKnown RBP12.27□□□□□ -0.45
ERCC1-201ENST00000013807 C11orf54Q9H0W9 315 aaPredicted RBP12.27□□□□□ -0.45
ERCC1-201ENST00000013807 FBXL15Q9H469 300 aa12.27□□□□□ -0.45
ERCC1-201ENST00000013807 DUSP21Q9H596 190 aa12.27□□□□□ -0.45
ERCC1-201ENST00000013807 ISYNA1Q9NPH2 558 aa12.27□□□□□ -0.45
ERCC1-201ENST00000013807 AK3Q9UIJ7 227 aa12.27□□□□□ -0.45
ERCC1-201ENST00000013807 RNF150Q9ULK6 438 aa12.27□□□□□ -0.45
ERCC1-201ENST00000013807 SMAD5-AS1Q9Y6J3 95 aa12.27□□□□□ -0.45
ERCC1-201ENST00000013807 A0A1W2PN81 502 aa12.26□□□□□ -0.45
ERCC1-201ENST00000013807 PTGES3LE9PB15 166 aa12.26□□□□□ -0.45
ERCC1-201ENST00000013807 ARPC1BO15143 372 aaKnown RBP12.26□□□□□ -0.45
ERCC1-201ENST00000013807 SOCS1O15524 211 aa12.26□□□□□ -0.45
ERCC1-201ENST00000013807 LGALS1P09382 135 aaKnown RBP12.26□□□□□ -0.45
ERCC1-201ENST00000013807 CHRNA7P36544 502 aa12.26□□□□□ -0.45
ERCC1-201ENST00000013807 HLA-DRB3P79483 266 aa12.26□□□□□ -0.45
ERCC1-201ENST00000013807 TRAM1Q15629 374 aa12.26□□□□□ -0.45
ERCC1-201ENST00000013807 ACSM6Q6P461 480 aa12.26□□□□□ -0.45
ERCC1-201ENST00000013807 DLX4Q92988 240 aaPredicted RBP12.26□□□□□ -0.45
ERCC1-201ENST00000013807 ABHD14BQ96IU4 210 aa12.26□□□□□ -0.45
ERCC1-201ENST00000013807 VCXQ9H320 206 aa12.26□□□□□ -0.45
ERCC1-201ENST00000013807 KCNK15Q9H427 330 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms