RNA–Protein interactions for RNA: ENSMUST00000113706.9

Trim39-203, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,204 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-203ENSMUST00000113706 A0A1L1SV24 88 aa13.64□□□□□ -0.23
Trim39-203ENSMUST00000113706 Vmn1r173E9Q8V7 313 aa13.64□□□□□ -0.23
Trim39-203ENSMUST00000113706 Bcl6bO88282 474 aa13.64□□□□□ -0.23
Trim39-203ENSMUST00000113706 Egr1P08046 533 aa13.64□□□□□ -0.23
Trim39-203ENSMUST00000113706 C730034F03RikQ8BGL5 111 aa13.64□□□□□ -0.23
Trim39-203ENSMUST00000113706 Rell2Q8BRJ3 303 aa13.64□□□□□ -0.23
Trim39-203ENSMUST00000113706 Vmn1r235Q8R297 328 aa13.64□□□□□ -0.23
Trim39-203ENSMUST00000113706 Dnajc24Q91ZF0 196 aa13.64□□□□□ -0.23
Trim39-203ENSMUST00000113706 Hebp2Q9WU63 205 aa13.64□□□□□ -0.23
Trim39-203ENSMUST00000113706 Asxl3Q8C4A5 2259 aa13.63□□□□□ -0.23
Trim39-203ENSMUST00000113706 Gm10778A0A087WNP5 499 aa13.63□□□□□ -0.23
Trim39-203ENSMUST00000113706 Tarm1B6A8R8 288 aa13.63□□□□□ -0.23
Trim39-203ENSMUST00000113706 Hnf1aP22361 628 aa13.63□□□□□ -0.23
Trim39-203ENSMUST00000113706 Cd82P40237 266 aa13.63□□□□□ -0.23
Trim39-203ENSMUST00000113706 Cln5Q3UMW8 341 aa13.63□□□□□ -0.23
Trim39-203ENSMUST00000113706 N4bp2l1Q3V2Q8 238 aa13.63□□□□□ -0.23
Trim39-203ENSMUST00000113706 Glra1Q64018 457 aa13.63□□□□□ -0.23
Trim39-203ENSMUST00000113706 SbsnQ8CIT9 700 aa13.63□□□□□ -0.23
Trim39-203ENSMUST00000113706 Cdc42ep2Q8JZX9 214 aa13.63□□□□□ -0.23
Trim39-203ENSMUST00000113706 Serpinb1bQ8VHP7 382 aa13.63□□□□□ -0.23
Trim39-203ENSMUST00000113706 Ndufb7Q9CR61 137 aa13.63□□□□□ -0.23
Trim39-203ENSMUST00000113706 SlirpQ9D8T7 112 aaKnown RBP13.63□□□□□ -0.23
Trim39-203ENSMUST00000113706 Olfr178E9Q9T3 319 aa13.63□□□□□ -0.23
Trim39-203ENSMUST00000113706 Gm21721J3QMK7 227 aa13.63□□□□□ -0.23
Trim39-203ENSMUST00000113706 3110021N24RikJ3QMN2 152 aa13.63□□□□□ -0.23
Trim39-203ENSMUST00000113706 Lyz2P08905 148 aa13.63□□□□□ -0.23
Trim39-203ENSMUST00000113706 UbdP63072 162 aa13.63□□□□□ -0.23
Trim39-203ENSMUST00000113706 Lyg2Q3V1I0 213 aa13.63□□□□□ -0.23
Trim39-203ENSMUST00000113706 Zfp677Q6PEP4 634 aa13.63□□□□□ -0.23
Trim39-203ENSMUST00000113706 Ceacam14Q78Y72 263 aa13.63□□□□□ -0.23
Trim39-203ENSMUST00000113706 Ankrd46Q8BTZ5 228 aa13.63□□□□□ -0.23
Trim39-203ENSMUST00000113706 Loxl4Q924C6 757 aa13.63□□□□□ -0.23
Trim39-203ENSMUST00000113706 Tmem216Q9CQC4 141 aa13.63□□□□□ -0.23
Trim39-203ENSMUST00000113706 Ndufa9Q9DC69 377 aaKnown RBP13.63□□□□□ -0.23
Trim39-203ENSMUST00000113706 C1galt1c1Q9JMG2 316 aa13.63□□□□□ -0.23
Trim39-203ENSMUST00000113706 MthfrQ9WU20 654 aa13.63□□□□□ -0.23
Trim39-203ENSMUST00000113706 Gm4175D3YTW8 314 aa13.62□□□□□ -0.23
Trim39-203ENSMUST00000113706 P01658 132 aa13.62□□□□□ -0.23
Trim39-203ENSMUST00000113706 Hoxb2P0C1T1 354 aa13.62□□□□□ -0.23
Trim39-203ENSMUST00000113706 Cd7P50283 210 aa13.62□□□□□ -0.23
Trim39-203ENSMUST00000113706 Kcng3P59053 433 aa13.62□□□□□ -0.23
Trim39-203ENSMUST00000113706 EnsaP60840 121 aa13.62□□□□□ -0.23
Trim39-203ENSMUST00000113706 GfralQ6SJE0 393 aa13.62□□□□□ -0.23
Trim39-203ENSMUST00000113706 Actrt3Q8BXF8 369 aa13.62□□□□□ -0.23
Trim39-203ENSMUST00000113706 Krt33aQ8K0Y2 404 aa13.62□□□□□ -0.23
Trim39-203ENSMUST00000113706 Vmn1r59Q8R2B9 310 aa13.62□□□□□ -0.23
Trim39-203ENSMUST00000113706 Med30Q9CQI9 178 aa13.62□□□□□ -0.23
Trim39-203ENSMUST00000113706 Olfr194L7N1Y8 306 aa13.62□□□□□ -0.23
Trim39-203ENSMUST00000113706 Olfr203L7N205 307 aa13.62□□□□□ -0.23
Trim39-203ENSMUST00000113706 Tbx15O70306 602 aa13.62□□□□□ -0.23
Trim39-203ENSMUST00000113706 Usf1Q61069 310 aa13.62□□□□□ -0.23
Trim39-203ENSMUST00000113706 Guk1Q64520 198 aa13.62□□□□□ -0.23
Trim39-203ENSMUST00000113706 Znf2Q8BIQ3 427 aa13.62□□□□□ -0.23
Trim39-203ENSMUST00000113706 SdhaQ8K2B3 664 aaKnown RBP13.62□□□□□ -0.23
Trim39-203ENSMUST00000113706 Cir1Q9DA19 450 aa13.62□□□□□ -0.23
Trim39-203ENSMUST00000113706 Gm12789B1AUV7 164 aa13.62□□□□□ -0.23
Trim39-203ENSMUST00000113706 Ly6g6fB2RXM6 300 aa13.62□□□□□ -0.23
Trim39-203ENSMUST00000113706 IfnabL7MTU6 190 aa13.62□□□□□ -0.23
Trim39-203ENSMUST00000113706 Scd2P13011 358 aa13.62□□□□□ -0.23
Trim39-203ENSMUST00000113706 Vmn1r181Q0P547 304 aa13.62□□□□□ -0.23
Trim39-203ENSMUST00000113706 NelfaQ8BG30 530 aa13.62□□□□□ -0.23
Trim39-203ENSMUST00000113706 Fam219aQ9D772 157 aa13.62□□□□□ -0.23
Trim39-203ENSMUST00000113706 IcaQ9DBD0 700 aa13.62□□□□□ -0.23
Trim39-203ENSMUST00000113706 Gdf15Q9Z0J7 303 aa13.62□□□□□ -0.23
Trim39-203ENSMUST00000113706 C2cd4aE9Q861 334 aa13.61□□□□□ -0.23
Trim39-203ENSMUST00000113706 Lcn12Q6JVL5 193 aa13.61□□□□□ -0.23
Trim39-203ENSMUST00000113706 Tmem30bQ8BHG3 353 aa13.61□□□□□ -0.23
Trim39-203ENSMUST00000113706 Ubald2Q8BQH4 164 aa13.61□□□□□ -0.23
Trim39-203ENSMUST00000113706 Q8BR90 294 aa13.61□□□□□ -0.23
Trim39-203ENSMUST00000113706 HikeshiQ9DD02 197 aa13.61□□□□□ -0.23
Trim39-203ENSMUST00000113706 Vmn1r41Q9EQ44 310 aa13.61□□□□□ -0.23
Trim39-203ENSMUST00000113706 Olfr894Q9EQB2 313 aa13.61□□□□□ -0.23
Trim39-203ENSMUST00000113706 Gm8797A0A0A6YW67 77 aa13.61□□□□□ -0.23
Trim39-203ENSMUST00000113706 Ccl3P10855 92 aa13.61□□□□□ -0.23
Trim39-203ENSMUST00000113706 Uba52P62984 128 aa13.61□□□□□ -0.23
Trim39-203ENSMUST00000113706 Vmn1r236Q05A06 334 aa13.61□□□□□ -0.23
Trim39-203ENSMUST00000113706 Msl2Q69ZF8 577 aa13.61□□□□□ -0.23
Trim39-203ENSMUST00000113706 Scgb2b2Q6UGQ3 114 aa13.61□□□□□ -0.23
Trim39-203ENSMUST00000113706 Gtdc1Q8BW56 445 aa13.61□□□□□ -0.23
Trim39-203ENSMUST00000113706 Olfr1260Q8VGN9 310 aa13.61□□□□□ -0.23
Trim39-203ENSMUST00000113706 Slc22a5Q9Z0E8 557 aa13.61□□□□□ -0.23
Trim39-203ENSMUST00000113706 Flg2Q2VIS4 2362 aa13.6□□□□□ -0.23
Trim39-203ENSMUST00000113706 Igkv4-80A0A075B5L7 116 aa13.6□□□□□ -0.23
Trim39-203ENSMUST00000113706 Gm45716A0A1B0GRQ0 93 aa13.6□□□□□ -0.23
Trim39-203ENSMUST00000113706 Olfr548-ps1A0A1B0GSG0 314 aa13.6□□□□□ -0.23
Trim39-203ENSMUST00000113706 Olfr685A0A1L1SVG7 331 aa13.6□□□□□ -0.23
Trim39-203ENSMUST00000113706 Dpagt1P42867 410 aa13.6□□□□□ -0.23
Trim39-203ENSMUST00000113706 Sult2a1P52843 285 aa13.6□□□□□ -0.23
Trim39-203ENSMUST00000113706 Cyb5aP56395 134 aa13.6□□□□□ -0.23
Trim39-203ENSMUST00000113706 Idh3gP70404 393 aa13.6□□□□□ -0.23
Trim39-203ENSMUST00000113706 Olfr324Q5NCC7 333 aa13.6□□□□□ -0.23
Trim39-203ENSMUST00000113706 PtafrQ62035 341 aa13.6□□□□□ -0.23
Trim39-203ENSMUST00000113706 Olfr1212Q7TR08 311 aa13.6□□□□□ -0.23
Trim39-203ENSMUST00000113706 Asphd2Q80VP9 343 aa13.6□□□□□ -0.23
Trim39-203ENSMUST00000113706 Magt1Q9CQY5 335 aa13.6□□□□□ -0.23
Trim39-203ENSMUST00000113706 Akap9Q70FJ1 3797 aa13.6□□□□□ -0.23
Trim39-203ENSMUST00000113706 BC117090L7N257 96 aa13.6□□□□□ -0.23
Trim39-203ENSMUST00000113706 Cxcl2P10889 100 aa13.6□□□□□ -0.23
Trim39-203ENSMUST00000113706 Hhipl1Q14DK5 791 aa13.6□□□□□ -0.23
Trim39-203ENSMUST00000113706 Lrrc52Q5M8M9 314 aa13.6□□□□□ -0.23
Retrieved 100 of 22,080 RNA–protein pairs in 60.1 ms