RNA–Protein interactions for RNA: ENSMUST00000076265.12

Upf3b-201, Transcript of UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3b, Length 2,344 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3b-201ENSMUST00000076265 Tspan11Q9D1D1 253 aa7.7□□□□□ -1.18
Upf3b-201ENSMUST00000076265 Q9D1K7 174 aaKnown RBP7.7□□□□□ -1.18
Upf3b-201ENSMUST00000076265 Klhdc8bQ9D2D9 354 aa7.7□□□□□ -1.18
Upf3b-201ENSMUST00000076265 Olfr1245A0A1L1SQJ6 307 aa7.69□□□□□ -1.18
Upf3b-201ENSMUST00000076265 Fndc10A2A9Q0 223 aa7.69□□□□□ -1.18
Upf3b-201ENSMUST00000076265 Rnf39A2RT81 352 aa7.69□□□□□ -1.18
Upf3b-201ENSMUST00000076265 CmahQ61419 577 aa7.69□□□□□ -1.18
Upf3b-201ENSMUST00000076265 B3galnt2Q8BG28 504 aa7.69□□□□□ -1.18
Upf3b-201ENSMUST00000076265 Rnf122Q8BP31 155 aa7.69□□□□□ -1.18
Upf3b-201ENSMUST00000076265 Tctn1Q8BZ64 593 aa7.69□□□□□ -1.18
Upf3b-201ENSMUST00000076265 Spin4Q8K1L2 249 aa7.69□□□□□ -1.18
Upf3b-201ENSMUST00000076265 Acvr1cQ8K348 493 aa7.69□□□□□ -1.18
Upf3b-201ENSMUST00000076265 Noxo1Q8VCM2 349 aa7.69□□□□□ -1.18
Upf3b-201ENSMUST00000076265 Olfr507Q8VG13 316 aa7.69□□□□□ -1.18
Upf3b-201ENSMUST00000076265 Olfr763Q8VGC1 309 aa7.69□□□□□ -1.18
Upf3b-201ENSMUST00000076265 Q9CQT9 129 aa7.69□□□□□ -1.18
Upf3b-201ENSMUST00000076265 Tspo2Q9CRZ8 162 aa7.69□□□□□ -1.18
Upf3b-201ENSMUST00000076265 Ppp1r1aQ9ERT9 171 aa7.69□□□□□ -1.18
Upf3b-201ENSMUST00000076265 Cldn12Q9ET43 244 aa7.69□□□□□ -1.18
Upf3b-201ENSMUST00000076265 Plxnd1Q3UH93 1925 aa7.69□□□□□ -1.18
Upf3b-201ENSMUST00000076265 Plxna1P70206 1894 aa7.69□□□□□ -1.18
Upf3b-201ENSMUST00000076265 Vmn2r84D3YWE3 849 aa7.69□□□□□ -1.18
Upf3b-201ENSMUST00000076265 BC048679D3YXE9 172 aa7.69□□□□□ -1.18
Upf3b-201ENSMUST00000076265 Olfr619E9PV95 320 aa7.69□□□□□ -1.18
Upf3b-201ENSMUST00000076265 H2-M11F6U8V3 335 aa7.69□□□□□ -1.18
Upf3b-201ENSMUST00000076265 Zfp619G3X9T2 1161 aa7.69□□□□□ -1.18
Upf3b-201ENSMUST00000076265 Cd8aP01731 247 aa7.69□□□□□ -1.18
Upf3b-201ENSMUST00000076265 Rab5cP35278 216 aa7.69□□□□□ -1.18
Upf3b-201ENSMUST00000076265 GcgP55095 180 aa7.69□□□□□ -1.18
Upf3b-201ENSMUST00000076265 Pla2g5P97391 137 aa7.69□□□□□ -1.18
Upf3b-201ENSMUST00000076265 MakQ04859 622 aa7.69□□□□□ -1.18
Upf3b-201ENSMUST00000076265 Samd12Q0VE29 161 aa7.69□□□□□ -1.18
Upf3b-201ENSMUST00000076265 Olfr324Q5NCC7 333 aa7.69□□□□□ -1.18
Upf3b-201ENSMUST00000076265 Ctf1Q60753 203 aa7.69□□□□□ -1.18
Upf3b-201ENSMUST00000076265 Cldn11Q60771 207 aa7.69□□□□□ -1.18
Upf3b-201ENSMUST00000076265 Olfr1383Q7TQT2 311 aa7.69□□□□□ -1.18
Upf3b-201ENSMUST00000076265 Olfr153Q7TR48 307 aa7.69□□□□□ -1.18
Upf3b-201ENSMUST00000076265 Olfr963Q7TRA9 311 aa7.69□□□□□ -1.18
Upf3b-201ENSMUST00000076265 Olfr25Q7TRD6 313 aa7.69□□□□□ -1.18
Upf3b-201ENSMUST00000076265 GalpQ810H5 117 aa7.69□□□□□ -1.18
Upf3b-201ENSMUST00000076265 Prdx6bQ8BG37 224 aa7.69□□□□□ -1.18
Upf3b-201ENSMUST00000076265 Psmb11Q8BG41 302 aa7.69□□□□□ -1.18
Upf3b-201ENSMUST00000076265 Hsd17b13Q8VCR2 304 aa7.69□□□□□ -1.18
Upf3b-201ENSMUST00000076265 Ppp1r27Q9D119 154 aa7.69□□□□□ -1.18
Upf3b-201ENSMUST00000076265 Cd164l2Q9D6W7 172 aa7.69□□□□□ -1.18
Upf3b-201ENSMUST00000076265 Ramp1Q9WTJ5 148 aa7.69□□□□□ -1.18
Upf3b-201ENSMUST00000076265 Skp2Q9Z0Z3 424 aa7.69□□□□□ -1.18
Upf3b-201ENSMUST00000076265 Unc80Q8BLN6 3261 aa7.68□□□□□ -1.18
Upf3b-201ENSMUST00000076265 Krtap28-13A0A087WQP5 138 aa7.68□□□□□ -1.18
Upf3b-201ENSMUST00000076265 A030005L19RikA0A1Y7VIU2 113 aa7.68□□□□□ -1.18
Upf3b-201ENSMUST00000076265 Olfr1157A2AVC4 312 aa7.68□□□□□ -1.18
Upf3b-201ENSMUST00000076265 Cd101A8E0Y8 1033 aa7.68□□□□□ -1.18
Upf3b-201ENSMUST00000076265 Cdc20bD3Z3I0 519 aa7.68□□□□□ -1.18
Upf3b-201ENSMUST00000076265 CrxO54751 299 aa7.68□□□□□ -1.18
Upf3b-201ENSMUST00000076265 Hmgb3O54879 200 aaKnown RBP7.68□□□□□ -1.18
Upf3b-201ENSMUST00000076265 Cldn1O88551 211 aa7.68□□□□□ -1.18
Upf3b-201ENSMUST00000076265 P01661 131 aa7.68□□□□□ -1.18
Upf3b-201ENSMUST00000076265 Rab22aP35285 194 aa7.68□□□□□ -1.18
Upf3b-201ENSMUST00000076265 Sar1aP36536 198 aa7.68□□□□□ -1.18
Upf3b-201ENSMUST00000076265 Sult4a1P63046 284 aa7.68□□□□□ -1.18
Upf3b-201ENSMUST00000076265 Lyplal1Q3UFF7 239 aa7.68□□□□□ -1.18
Upf3b-201ENSMUST00000076265 Zfp872Q3UVL3 465 aa7.68□□□□□ -1.18
Upf3b-201ENSMUST00000076265 Hist2h2beQ64524 126 aa7.68□□□□□ -1.18
Upf3b-201ENSMUST00000076265 SvoplQ6PDF3 494 aa7.68□□□□□ -1.18
Upf3b-201ENSMUST00000076265 Gpr137bQ8BNQ3 385 aa7.68□□□□□ -1.18
Upf3b-201ENSMUST00000076265 Guf1Q8C3X4 651 aaKnown RBP7.68□□□□□ -1.18
Upf3b-201ENSMUST00000076265 Lyrm2Q8R033 88 aa7.68□□□□□ -1.18
Upf3b-201ENSMUST00000076265 Olfr850Q8VFF2 315 aa7.68□□□□□ -1.18
Upf3b-201ENSMUST00000076265 Snx11Q91WL6 271 aa7.68□□□□□ -1.18
Upf3b-201ENSMUST00000076265 Asb10Q91ZT7 467 aa7.68□□□□□ -1.18
Upf3b-201ENSMUST00000076265 Cmss1Q9CZT6 276 aaKnown RBP7.68□□□□□ -1.18
Upf3b-201ENSMUST00000076265 Lamtor5Q9D1L9 91 aa7.68□□□□□ -1.18
Upf3b-201ENSMUST00000076265 Triap1Q9D8Z2 76 aa7.68□□□□□ -1.18
Upf3b-201ENSMUST00000076265 Rbfox1Q9JJ43 396 aa7.68□□□□□ -1.18
Upf3b-201ENSMUST00000076265 SrfQ9JM73 504 aa7.68□□□□□ -1.18
Upf3b-201ENSMUST00000076265 Nupr1Q9WTK0 80 aa7.68□□□□□ -1.18
Upf3b-201ENSMUST00000076265 Rnf7Q9WTZ1 113 aa7.68□□□□□ -1.18
Upf3b-201ENSMUST00000076265 Vsig2Q9Z109 328 aa7.68□□□□□ -1.18
Upf3b-201ENSMUST00000076265 Myo5aQ99104 1853 aaKnown RBP7.68□□□□□ -1.18
Upf3b-201ENSMUST00000076265 Gm43518A0A0G2JGB6 165 aa7.68□□□□□ -1.18
Upf3b-201ENSMUST00000076265 Gm5741B2RVA4 72 aa7.68□□□□□ -1.18
Upf3b-201ENSMUST00000076265 Gm8444F6XS56 118 aa7.68□□□□□ -1.18
Upf3b-201ENSMUST00000076265 GzmbP04187 247 aa7.68□□□□□ -1.18
Upf3b-201ENSMUST00000076265 Mrgprx2Q3UG50 352 aa7.68□□□□□ -1.18
Upf3b-201ENSMUST00000076265 Tmem86bQ497J1 226 aa7.68□□□□□ -1.18
Upf3b-201ENSMUST00000076265 Npy6rQ61212 371 aa7.68□□□□□ -1.18
Upf3b-201ENSMUST00000076265 Zic4Q61467 341 aa7.68□□□□□ -1.18
Upf3b-201ENSMUST00000076265 Kiss1Q6Y4S4 130 aa7.68□□□□□ -1.18
Upf3b-201ENSMUST00000076265 Gng5Q80SZ7 68 aa7.68□□□□□ -1.18
Upf3b-201ENSMUST00000076265 C030005K15RikQ8BQN9 115 aa7.68□□□□□ -1.18
Upf3b-201ENSMUST00000076265 Tmem267Q8VDR5 215 aa7.68□□□□□ -1.18
Upf3b-201ENSMUST00000076265 Olfr186Q8VEX5 309 aa7.68□□□□□ -1.18
Upf3b-201ENSMUST00000076265 Olfr1258Q8VGN6 311 aa7.68□□□□□ -1.18
Upf3b-201ENSMUST00000076265 Dok5Q91ZM9 306 aa7.68□□□□□ -1.18
Upf3b-201ENSMUST00000076265 EtfaQ99LC5 333 aaKnown RBP7.68□□□□□ -1.18
Upf3b-201ENSMUST00000076265 Nprl2Q9WUE4 380 aa7.68□□□□□ -1.18
Upf3b-201ENSMUST00000076265 Cst9Q9Z0H6 137 aa7.68□□□□□ -1.18
Upf3b-201ENSMUST00000076265 Olfr1532-ps1A0A0R4J8U2 307 aa7.67□□□□□ -1.18
Upf3b-201ENSMUST00000076265 Gm45194A0A140LJG2 572 aa7.67□□□□□ -1.18
Upf3b-201ENSMUST00000076265 Olfr1253A2AUA2 318 aa7.67□□□□□ -1.18
Retrieved 100 of 22,080 RNA–protein pairs in 32 ms