RNA–Protein interactions for RNA: ENST00000641939.1

PHGDH-231, Transcript of phosphoglycerate dehydrogenase, human

Gene PHGDH, Length 540 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PHGDH-231	ENST00000641939	YPEL2	Q96QA6	119 aa		11.96	□□□□□ -0.49
PHGDH-231	ENST00000641939	ABHD14A	Q9BUJ0	271 aa		11.96	□□□□□ -0.49
PHGDH-231	ENST00000641939	PECR	Q9BY49	303 aa		11.96	□□□□□ -0.49
PHGDH-231	ENST00000641939	STUB1	Q9UNE7	303 aa		11.96	□□□□□ -0.49
PHGDH-231	ENST00000641939	PLXNB1	O43157	2135 aa		11.96	□□□□□ -0.5
PHGDH-231	ENST00000641939	FGF16	O43320	207 aa		11.95	□□□□□ -0.5
PHGDH-231	ENST00000641939	PLA2G7	Q13093	441 aa		11.95	□□□□□ -0.5
PHGDH-231	ENST00000641939	KCTD21	Q4G0X4	260 aa		11.95	□□□□□ -0.5
PHGDH-231	ENST00000641939	CENPV	Q7Z7K6	275 aa	Predicted RBP	11.95	□□□□□ -0.5
PHGDH-231	ENST00000641939	OR5AU1	Q8NGC0	362 aa		11.95	□□□□□ -0.5
PHGDH-231	ENST00000641939	OR2T10	Q8NGZ9	312 aa		11.95	□□□□□ -0.5
PHGDH-231	ENST00000641939	IL1F10	Q8WWZ1	152 aa		11.95	□□□□□ -0.5
PHGDH-231	ENST00000641939	EAF1	Q96JC9	268 aa	Predicted RBP	11.95	□□□□□ -0.5
PHGDH-231	ENST00000641939	HDHD3	Q9BSH5	251 aa	Predicted RBP	11.95	□□□□□ -0.5
PHGDH-231	ENST00000641939	C12orf4	Q9NQ89	552 aa		11.95	□□□□□ -0.5
PHGDH-231	ENST00000641939	TXNL4B	Q9NX01	149 aa	Known RBP	11.95	□□□□□ -0.5
PHGDH-231	ENST00000641939	MGAT4A	Q9UM21	535 aa		11.95	□□□□□ -0.5
PHGDH-231	ENST00000641939	LANCL1	O43813	399 aa		11.94	□□□□□ -0.5
PHGDH-231	ENST00000641939	NSUN5P1	Q3KNT7	163 aa		11.94	□□□□□ -0.5
PHGDH-231	ENST00000641939	PLAC9	Q5JTB6	97 aa		11.94	□□□□□ -0.5
PHGDH-231	ENST00000641939		Q8N6K4	173 aa		11.94	□□□□□ -0.5
PHGDH-231	ENST00000641939	OR2AK2	Q8NG84	335 aa		11.94	□□□□□ -0.5
PHGDH-231	ENST00000641939	CITED2	Q99967	270 aa	Predicted RBP	11.94	□□□□□ -0.5
PHGDH-231	ENST00000641939	CMSS1	Q9BQ75	279 aa	Known RBP	11.94	□□□□□ -0.5
PHGDH-231	ENST00000641939	SSR3	Q9UNL2	185 aa		11.94	□□□□□ -0.5
PHGDH-231	ENST00000641939	NCBP2L	A6PVI3	153 aa	Known RBP	11.93	□□□□□ -0.5
PHGDH-231	ENST00000641939	ZNF736	B4DX44	427 aa	Predicted RBP	11.93	□□□□□ -0.5
PHGDH-231	ENST00000641939	MOS	P00540	346 aa		11.93	□□□□□ -0.5
PHGDH-231	ENST00000641939	RAB6A	P20340	208 aa		11.93	□□□□□ -0.5
PHGDH-231	ENST00000641939	HLA-DRB3	P79483	266 aa		11.93	□□□□□ -0.5
PHGDH-231	ENST00000641939	NR2C2AP	Q86WQ0	139 aa		11.93	□□□□□ -0.5
PHGDH-231	ENST00000641939	NDUFA11	Q86Y39	141 aa		11.93	□□□□□ -0.5
PHGDH-231	ENST00000641939	ODF3L1	Q8IXM7	274 aa		11.93	□□□□□ -0.5
PHGDH-231	ENST00000641939	RAB3C	Q96E17	227 aa		11.93	□□□□□ -0.5
PHGDH-231	ENST00000641939		Q9N2K0	584 aa		11.93	□□□□□ -0.5
PHGDH-231	ENST00000641939		A0A0B4J203	849 aa		11.92	□□□□□ -0.5
PHGDH-231	ENST00000641939	SMIM30	A4D0T7	59 aa		11.92	□□□□□ -0.5
PHGDH-231	ENST00000641939	NOTO	A8MTQ0	251 aa		11.92	□□□□□ -0.5
PHGDH-231	ENST00000641939	GADD45A	P24522	165 aa		11.92	□□□□□ -0.5
PHGDH-231	ENST00000641939	CD83	Q01151	205 aa		11.92	□□□□□ -0.5
PHGDH-231	ENST00000641939	NEDD8	Q15843	81 aa		11.92	□□□□□ -0.5
PHGDH-231	ENST00000641939	MOGAT2	Q3SYC2	334 aa		11.92	□□□□□ -0.5
PHGDH-231	ENST00000641939	TPRA1	Q86W33	373 aa		11.92	□□□□□ -0.5
PHGDH-231	ENST00000641939	OR10R2	Q8NGX6	335 aa		11.92	□□□□□ -0.5
PHGDH-231	ENST00000641939	PTX4	Q96A99	478 aa		11.92	□□□□□ -0.5
PHGDH-231	ENST00000641939	OR51E2	Q9H255	320 aa		11.92	□□□□□ -0.5
PHGDH-231	ENST00000641939	SAA2-SAA4	A0A096LPE2	208 aa		11.91	□□□□□ -0.5
PHGDH-231	ENST00000641939	METTL21EP	A6NDL7	271 aa		11.91	□□□□□ -0.5
PHGDH-231	ENST00000641939	ADARB2-AS1	A8MUL3	147 aa		11.91	□□□□□ -0.5
PHGDH-231	ENST00000641939	ST8SIA5	O15466	376 aa		11.91	□□□□□ -0.5
PHGDH-231	ENST00000641939	HSPA12A	O43301	675 aa		11.91	□□□□□ -0.5
PHGDH-231	ENST00000641939	IGHG2	P01859	326 aa		11.91	□□□□□ -0.5
PHGDH-231	ENST00000641939	CD3G	P09693	182 aa		11.91	□□□□□ -0.5
PHGDH-231	ENST00000641939	SAA2	P0DJI9	122 aa	Predicted RBP	11.91	□□□□□ -0.5
PHGDH-231	ENST00000641939	SLC2A2	P11168	524 aa	Predicted RBP	11.91	□□□□□ -0.5
PHGDH-231	ENST00000641939	ZBTB25	P24278	435 aa		11.91	□□□□□ -0.5
PHGDH-231	ENST00000641939	OR3A3	P47888	321 aa		11.91	□□□□□ -0.5
PHGDH-231	ENST00000641939	MRPS15	P82914	257 aa	Known RBP	11.91	□□□□□ -0.5
PHGDH-231	ENST00000641939	LSAMP	Q13449	338 aa		11.91	□□□□□ -0.5
PHGDH-231	ENST00000641939	ZNF833P	Q6ZTB9	187 aa		11.91	□□□□□ -0.5
PHGDH-231	ENST00000641939		Q8N9W7	124 aa		11.91	□□□□□ -0.5
PHGDH-231	ENST00000641939	OR4X2	Q8NGF9	303 aa		11.91	□□□□□ -0.5
PHGDH-231	ENST00000641939	OR8H1	Q8NGG4	311 aa		11.91	□□□□□ -0.5
PHGDH-231	ENST00000641939	KCTD7	Q96MP8	289 aa		11.91	□□□□□ -0.5
PHGDH-231	ENST00000641939	CHCHD6	Q9BRQ6	235 aa		11.91	□□□□□ -0.5
PHGDH-231	ENST00000641939	MRPL20	Q9BYC9	149 aa	Known RBP	11.91	□□□□□ -0.5
PHGDH-231	ENST00000641939	IFI27L2	Q9H2X8	130 aa		11.91	□□□□□ -0.5
PHGDH-231	ENST00000641939	LIN7C	Q9NUP9	197 aa	Known RBP	11.91	□□□□□ -0.5
PHGDH-231	ENST00000641939	SLC23A1	Q9UHI7	598 aa		11.91	□□□□□ -0.5
PHGDH-231	ENST00000641939	KCNK7	Q9Y2U2	307 aa		11.91	□□□□□ -0.5
PHGDH-231	ENST00000641939	TRDC	B7Z8K6	153 aa		11.9	□□□□□ -0.5
PHGDH-231	ENST00000641939	RAB27B	O00194	218 aa		11.9	□□□□□ -0.5
PHGDH-231	ENST00000641939	ITGB1BP1	O14713	200 aa		11.9	□□□□□ -0.5
PHGDH-231	ENST00000641939	RAB29	O14966	203 aa		11.9	□□□□□ -0.5
PHGDH-231	ENST00000641939	OPN1MW	P04001	364 aa		11.9	□□□□□ -0.5
PHGDH-231	ENST00000641939	SCT	P09683	121 aa		11.9	□□□□□ -0.5
PHGDH-231	ENST00000641939	OPN1MW2	P0DN77	364 aa		11.9	□□□□□ -0.5
PHGDH-231	ENST00000641939	OPN1MW3	P0DN78	364 aa		11.9	□□□□□ -0.5
PHGDH-231	ENST00000641939	CD36	P16671	472 aa		11.9	□□□□□ -0.5
PHGDH-231	ENST00000641939	SDC2	P34741	201 aa		11.9	□□□□□ -0.5
PHGDH-231	ENST00000641939	CEACAM6	P40199	344 aa		11.9	□□□□□ -0.5
PHGDH-231	ENST00000641939	TCTEX1D4	Q5JR98	221 aa		11.9	□□□□□ -0.5
PHGDH-231	ENST00000641939	FAM71F2	Q6NXP2	309 aa		11.9	□□□□□ -0.5
PHGDH-231	ENST00000641939	SLC35E3	Q7Z769	313 aa		11.9	□□□□□ -0.5
PHGDH-231	ENST00000641939	OR4F17	Q8NGA8	305 aa		11.9	□□□□□ -0.5
PHGDH-231	ENST00000641939	EDARADD	Q8WWZ3	215 aa		11.9	□□□□□ -0.5
PHGDH-231	ENST00000641939	R3HDM4	Q96D70	268 aa		11.9	□□□□□ -0.5
PHGDH-231	ENST00000641939	OR4F4	Q96R69	305 aa		11.9	□□□□□ -0.5
PHGDH-231	ENST00000641939	S1PR3	Q99500	378 aa		11.9	□□□□□ -0.5
PHGDH-231	ENST00000641939	RASL11B	Q9BPW5	248 aa		11.9	□□□□□ -0.5
PHGDH-231	ENST00000641939	NABP2	Q9BQ15	211 aa		11.9	□□□□□ -0.5
PHGDH-231	ENST00000641939	PLSCR3	Q9NRY6	295 aa		11.9	□□□□□ -0.5
PHGDH-231	ENST00000641939	PIPOX	Q9P0Z9	390 aa		11.9	□□□□□ -0.5
PHGDH-231	ENST00000641939	OR1A1	Q9P1Q5	309 aa		11.9	□□□□□ -0.5
PHGDH-231	ENST00000641939		A0A075B6Q4	140 aa		11.89	□□□□□ -0.51
PHGDH-231	ENST00000641939	LOC100506127	A0A0U1RQW1	187 aa		11.89	□□□□□ -0.51
PHGDH-231	ENST00000641939	TCRBV4S1A1T	A0A5B7	111 aa		11.89	□□□□□ -0.51
PHGDH-231	ENST00000641939	PSMB11	A5LHX3	300 aa		11.89	□□□□□ -0.51
PHGDH-231	ENST00000641939	SERPINE3	A8MV23	424 aa		11.89	□□□□□ -0.51
PHGDH-231	ENST00000641939	MFNG	O00587	321 aa		11.89	□□□□□ -0.51

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