RNA–Protein interactions for RNA: ENST00000641247.1

PHGDH-212, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 710 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-212ENST00000641247 C1orf196B1AJZ1 125 aa7.78□□□□□ -1.16
PHGDH-212ENST00000641247 H3BSH0 61 aa7.78□□□□□ -1.16
PHGDH-212ENST00000641247 ST8SIA5O15466 376 aa7.78□□□□□ -1.16
PHGDH-212ENST00000641247 SYNGR1O43759 233 aa7.78□□□□□ -1.16
PHGDH-212ENST00000641247 PF4P02776 101 aa7.78□□□□□ -1.16
PHGDH-212ENST00000641247 LCATP04180 440 aa7.78□□□□□ -1.16
PHGDH-212ENST00000641247 RPA2P15927 270 aa7.78□□□□□ -1.16
PHGDH-212ENST00000641247 MECP2P51608 486 aaKnown RBP7.78□□□□□ -1.16
PHGDH-212ENST00000641247 CAV3P56539 151 aa7.78□□□□□ -1.16
PHGDH-212ENST00000641247 EIF5AP63241 154 aaKnown RBP7.78□□□□□ -1.16
PHGDH-212ENST00000641247 DNLZQ5SXM8 178 aa7.78□□□□□ -1.16
PHGDH-212ENST00000641247 LDLRAD2Q5SZI1 272 aa7.78□□□□□ -1.16
PHGDH-212ENST00000641247 ETV3LQ6ZN32 361 aa7.78□□□□□ -1.16
PHGDH-212ENST00000641247 MRPL41Q8IXM3 137 aaKnown RBP7.78□□□□□ -1.16
PHGDH-212ENST00000641247 MKXQ8IYA7 352 aa7.78□□□□□ -1.16
PHGDH-212ENST00000641247 C11orf42Q8N5U0 333 aa7.78□□□□□ -1.16
PHGDH-212ENST00000641247 PLPP7Q8NBV4 271 aa7.78□□□□□ -1.16
PHGDH-212ENST00000641247 BEST4Q8NFU0 473 aa7.78□□□□□ -1.16
PHGDH-212ENST00000641247 OR11H4Q8NGC9 324 aa7.78□□□□□ -1.16
PHGDH-212ENST00000641247 OR13C3Q8NGS6 347 aa7.78□□□□□ -1.16
PHGDH-212ENST00000641247 GLYATL2Q8WU03 294 aa7.78□□□□□ -1.16
PHGDH-212ENST00000641247 CCDC107Q8WV48 283 aa7.78□□□□□ -1.16
PHGDH-212ENST00000641247 H1FXQ92522 213 aaKnown RBP7.78□□□□□ -1.16
PHGDH-212ENST00000641247 ADAT1Q9BUB4 502 aaKnown RBP7.78□□□□□ -1.16
PHGDH-212ENST00000641247 RGCCQ9H4X1 137 aa7.78□□□□□ -1.16
PHGDH-212ENST00000641247 ZCCHC4Q9H5U6 513 aa7.78□□□□□ -1.16
PHGDH-212ENST00000641247 METTL8Q9H825 291 aaKnown RBP7.78□□□□□ -1.16
PHGDH-212ENST00000641247 ELL3Q9HB65 397 aaPredicted RBP7.78□□□□□ -1.16
PHGDH-212ENST00000641247 RAB18Q9NP72 206 aa7.78□□□□□ -1.16
PHGDH-212ENST00000641247 GPR84Q9NQS5 396 aa7.78□□□□□ -1.16
PHGDH-212ENST00000641247 MGAT4CQ9UBM8 478 aa7.78□□□□□ -1.16
PHGDH-212ENST00000641247 CKLFQ9UBR5 152 aa7.78□□□□□ -1.16
PHGDH-212ENST00000641247 ZNF391Q9UJN7 358 aa7.78□□□□□ -1.16
PHGDH-212ENST00000641247 TCF19Q9Y242 345 aa7.78□□□□□ -1.16
PHGDH-212ENST00000641247 KANTRA0A1W2PQU2 76 aa7.77□□□□□ -1.17
PHGDH-212ENST00000641247 TCRBV4S1A1TA0A5B7 111 aa7.77□□□□□ -1.17
PHGDH-212ENST00000641247 SMIM30A4D0T7 59 aa7.77□□□□□ -1.17
PHGDH-212ENST00000641247 A6NLC8 198 aa7.77□□□□□ -1.17
PHGDH-212ENST00000641247 M0R1W7 72 aa7.77□□□□□ -1.17
PHGDH-212ENST00000641247 NDUFB3O43676 98 aa7.77□□□□□ -1.17
PHGDH-212ENST00000641247 ANGPTL7O43827 346 aa7.77□□□□□ -1.17
PHGDH-212ENST00000641247 KDM4BO94953 1096 aa7.77□□□□□ -1.17
PHGDH-212ENST00000641247 OR2F2O95006 317 aa7.77□□□□□ -1.17
PHGDH-212ENST00000641247 DUS4LO95620 317 aaKnown RBP7.77□□□□□ -1.17
PHGDH-212ENST00000641247 ALDOBP05062 364 aa7.77□□□□□ -1.17
PHGDH-212ENST00000641247 ELK1P19419 428 aa7.77□□□□□ -1.17
PHGDH-212ENST00000641247 FSTP19883 344 aa7.77□□□□□ -1.17
PHGDH-212ENST00000641247 LMO1P25800 156 aa7.77□□□□□ -1.17
PHGDH-212ENST00000641247 ZNF92Q03936 586 aa7.77□□□□□ -1.17
PHGDH-212ENST00000641247 OR2F1Q13607 317 aa7.77□□□□□ -1.17
PHGDH-212ENST00000641247 P2RY14Q15391 338 aa7.77□□□□□ -1.17
PHGDH-212ENST00000641247 CNN3Q15417 329 aaKnown RBP7.77□□□□□ -1.17
PHGDH-212ENST00000641247 SNAI3Q3KNW1 292 aa7.77□□□□□ -1.17
PHGDH-212ENST00000641247 NCR3LG1Q68D85 454 aa7.77□□□□□ -1.17
PHGDH-212ENST00000641247 LPCAT3Q6P1A2 487 aa7.77□□□□□ -1.17
PHGDH-212ENST00000641247 SFXN4Q6P4A7 337 aa7.77□□□□□ -1.17
PHGDH-212ENST00000641247 GLDNQ6ZMI3 551 aaPredicted RBP7.77□□□□□ -1.17
PHGDH-212ENST00000641247 ADAMTSL5Q6ZMM2 481 aa7.77□□□□□ -1.17
PHGDH-212ENST00000641247 Q6ZSR3 168 aa7.77□□□□□ -1.17
PHGDH-212ENST00000641247 LRRTM1Q86UE6 522 aa7.77□□□□□ -1.17
PHGDH-212ENST00000641247 NR2C2APQ86WQ0 139 aa7.77□□□□□ -1.17
PHGDH-212ENST00000641247 COMMD2Q86X83 199 aa7.77□□□□□ -1.17
PHGDH-212ENST00000641247 SERPINA12Q8IW75 414 aa7.77□□□□□ -1.17
PHGDH-212ENST00000641247 ZNF561Q8N587 486 aa7.77□□□□□ -1.17
PHGDH-212ENST00000641247 DMBX1Q8NFW5 382 aa7.77□□□□□ -1.17
PHGDH-212ENST00000641247 OR2AE1Q8NHA4 323 aa7.77□□□□□ -1.17
PHGDH-212ENST00000641247 LRRC29Q8WV35 223 aa7.77□□□□□ -1.17
PHGDH-212ENST00000641247 FGGYQ96C11 551 aa7.77□□□□□ -1.17
PHGDH-212ENST00000641247 MRPS24Q96EL2 167 aaKnown RBP7.77□□□□□ -1.17
PHGDH-212ENST00000641247 ARL6Q9H0F7 186 aa7.77□□□□□ -1.17
PHGDH-212ENST00000641247 WDR13Q9H1Z4 485 aa7.77□□□□□ -1.17
PHGDH-212ENST00000641247 HERC2O95714 4834 aa7.77□□□□□ -1.17
PHGDH-212ENST00000641247 STARD9Q9P2P6 4700 aa7.77□□□□□ -1.17
PHGDH-212ENST00000641247 STAB2Q8WWQ8 2551 aa7.76□□□□□ -1.17
PHGDH-212ENST00000641247 TRAV8-7A0A075B6U6 113 aa7.76□□□□□ -1.17
PHGDH-212ENST00000641247 FAM90A8PA6NJQ4 464 aa7.76□□□□□ -1.17
PHGDH-212ENST00000641247 ZNF729A6NN14 1252 aaPredicted RBP7.76□□□□□ -1.17
PHGDH-212ENST00000641247 DHRS7CA6NNS2 312 aa7.76□□□□□ -1.17
PHGDH-212ENST00000641247 XRCC2O43543 280 aa7.76□□□□□ -1.17
PHGDH-212ENST00000641247 DHRS3O75911 302 aa7.76□□□□□ -1.17
PHGDH-212ENST00000641247 IFNA10P01566 189 aa7.76□□□□□ -1.17
PHGDH-212ENST00000641247 RLN2P04090 185 aa7.76□□□□□ -1.17
PHGDH-212ENST00000641247 MAS1P04201 325 aa7.76□□□□□ -1.17
PHGDH-212ENST00000641247 LPLP06858 475 aa7.76□□□□□ -1.17
PHGDH-212ENST00000641247 MUC1P15941 1255 aaPredicted RBP7.76□□□□□ -1.17
PHGDH-212ENST00000641247 IGFBP3P17936 291 aaPredicted RBP7.76□□□□□ -1.17
PHGDH-212ENST00000641247 RAB4AP20338 218 aa7.76□□□□□ -1.17
PHGDH-212ENST00000641247 RAB5CP51148 216 aa7.76□□□□□ -1.17
PHGDH-212ENST00000641247 OR10A3P58181 314 aa7.76□□□□□ -1.17
PHGDH-212ENST00000641247 GFOD2Q3B7J2 385 aa7.76□□□□□ -1.17
PHGDH-212ENST00000641247 ATPAF1Q5TC12 328 aaPredicted RBP7.76□□□□□ -1.17
PHGDH-212ENST00000641247 STUMQ69YW2 141 aa7.76□□□□□ -1.17
PHGDH-212ENST00000641247 ZFAND6Q6FIF0 208 aa7.76□□□□□ -1.17
PHGDH-212ENST00000641247 EIF5AL1Q6IS14 154 aaKnown RBP7.76□□□□□ -1.17
PHGDH-212ENST00000641247 WDR82Q6UXN9 313 aa7.76□□□□□ -1.17
PHGDH-212ENST00000641247 LIAT1Q6ZQX7 453 aa7.76□□□□□ -1.17
PHGDH-212ENST00000641247 C18orf65Q6ZTR6 163 aa7.76□□□□□ -1.17
PHGDH-212ENST00000641247 SLC36A1Q7Z2H8 476 aa7.76□□□□□ -1.17
PHGDH-212ENST00000641247 C15orf54Q8N8G6 183 aa7.76□□□□□ -1.17
PHGDH-212ENST00000641247 SAMD12Q8N8I0 201 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms