RNA–Protein interactions for RNA: ENST00000640652.1

SCN3A-210, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5

Gene SCN3A, Length 8,825 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-210ENST00000640652 RAB7AP51149 207 aa4.79□□□□□ -1.64
SCN3A-210ENST00000640652 FGF8P55075 233 aaPredicted RBP4.79□□□□□ -1.64
SCN3A-210ENST00000640652 SPINK14Q6IE38 97 aa4.79□□□□□ -1.64
SCN3A-210ENST00000640652 OR4D5Q8NGN0 318 aa4.79□□□□□ -1.64
SCN3A-210ENST00000640652 MPDU1O75352 247 aa4.79□□□□□ -1.64
SCN3A-210ENST00000640652 RPS23P62266 143 aaKnown RBP4.79□□□□□ -1.64
SCN3A-210ENST00000640652 CLEC9AQ6UXN8 241 aa4.79□□□□□ -1.64
SCN3A-210ENST00000640652 ZNF645Q8N7E2 425 aa4.79□□□□□ -1.64
SCN3A-210ENST00000640652 OR2T10Q8NGZ9 312 aa4.79□□□□□ -1.64
SCN3A-210ENST00000640652 NABP1Q96AH0 204 aa4.79□□□□□ -1.64
SCN3A-210ENST00000640652 VPS13AQ96RL7 3174 aa4.78□□□□□ -1.64
SCN3A-210ENST00000640652 XIRP2A4UGR9 3374 aa4.78□□□□□ -1.64
SCN3A-210ENST00000640652 ZNF506Q5JVG8 444 aa4.78□□□□□ -1.64
SCN3A-210ENST00000640652 NEIL1Q96FI4 390 aaPredicted RBP4.78□□□□□ -1.64
SCN3A-210ENST00000640652 IMMP1LQ96LU5 166 aa4.78□□□□□ -1.64
SCN3A-210ENST00000640652 TUBG2Q9NRH3 451 aa4.78□□□□□ -1.64
SCN3A-210ENST00000640652 CCL28Q9NRJ3 127 aa4.78□□□□□ -1.64
SCN3A-210ENST00000640652 PRSS50Q9UI38 385 aa4.78□□□□□ -1.64
SCN3A-210ENST00000640652 CACNA1AO00555 2505 aa4.78□□□□□ -1.64
SCN3A-210ENST00000640652 MED19A0JLT2 244 aaPredicted RBP4.78□□□□□ -1.64
SCN3A-210ENST00000640652 J3QT63 122 aa4.78□□□□□ -1.64
SCN3A-210ENST00000640652 KLK2P20151 261 aa4.78□□□□□ -1.64
SCN3A-210ENST00000640652 SPATA46Q5T0L3 261 aa4.78□□□□□ -1.64
SCN3A-210ENST00000640652 CLDND2Q8NHS1 167 aa4.78□□□□□ -1.64
SCN3A-210ENST00000640652 TP53RKQ96S44 253 aa4.78□□□□□ -1.64
SCN3A-210ENST00000640652 GSN-AS1Q9NRJ2 163 aa4.78□□□□□ -1.64
SCN3A-210ENST00000640652 A0A087X0M5 115 aa4.78□□□□□ -1.64
SCN3A-210ENST00000640652 A0A0U1RQK1 487 aa4.78□□□□□ -1.64
SCN3A-210ENST00000640652 A0A1B0GX30 115 aa4.78□□□□□ -1.64
SCN3A-210ENST00000640652 GRPP07492 148 aa4.78□□□□□ -1.64
SCN3A-210ENST00000640652 MPLP40238 635 aa4.78□□□□□ -1.64
SCN3A-210ENST00000640652 HIST1H3AP68431 136 aa4.78□□□□□ -1.64
SCN3A-210ENST00000640652 WDR73Q6P4I2 378 aa4.78□□□□□ -1.64
SCN3A-210ENST00000640652 ZNF66Q6ZN08 573 aa4.78□□□□□ -1.64
SCN3A-210ENST00000640652 LINC00696Q6ZRV3 163 aa4.78□□□□□ -1.64
SCN3A-210ENST00000640652 TUSC5Q8IXB3 177 aa4.78□□□□□ -1.64
SCN3A-210ENST00000640652 SHISA5Q8N114 240 aa4.78□□□□□ -1.64
SCN3A-210ENST00000640652 ZNF808Q8N4W9 903 aaPredicted RBP4.78□□□□□ -1.64
SCN3A-210ENST00000640652 CISD2Q8N5K1 135 aaKnown RBP4.78□□□□□ -1.64
SCN3A-210ENST00000640652 FAM216AQ8WUB2 273 aa4.78□□□□□ -1.64
SCN3A-210ENST00000640652 LINC00470Q9BZP3 86 aa4.78□□□□□ -1.64
SCN3A-210ENST00000640652 ARGFXA6NJG6 315 aa4.78□□□□□ -1.64
SCN3A-210ENST00000640652 TMEM252Q8N6L7 170 aa4.78□□□□□ -1.64
SCN3A-210ENST00000640652 DDA1Q9BW61 102 aa4.78□□□□□ -1.64
SCN3A-210ENST00000640652 SLC25A22Q9H936 323 aa4.78□□□□□ -1.64
SCN3A-210ENST00000640652 FKBP11Q9NYL4 201 aa4.78□□□□□ -1.64
SCN3A-210ENST00000640652 ADH4P08319 380 aa4.78□□□□□ -1.64
SCN3A-210ENST00000640652 RPS2P15880 293 aaKnown RBP4.78□□□□□ -1.64
SCN3A-210ENST00000640652 TAS2R45P59539 299 aa4.78□□□□□ -1.64
SCN3A-210ENST00000640652 SSTP61278 116 aa4.78□□□□□ -1.64
SCN3A-210ENST00000640652 PMS2P11Q13670 270 aa4.78□□□□□ -1.64
SCN3A-210ENST00000640652 FBXW9Q5XUX1 488 aa4.78□□□□□ -1.64
SCN3A-210ENST00000640652 PMS2CLQ68D20 193 aa4.78□□□□□ -1.64
SCN3A-210ENST00000640652 TMEM42Q69YG0 159 aa4.78□□□□□ -1.64
SCN3A-210ENST00000640652 ABLIM2Q6H8Q1 611 aa4.78□□□□□ -1.64
SCN3A-210ENST00000640652 ALKBH2Q6NS38 261 aa4.78□□□□□ -1.64
SCN3A-210ENST00000640652 OR5P3Q8WZ94 311 aa4.78□□□□□ -1.64
SCN3A-210ENST00000640652 GMPPAQ96IJ6 420 aaPredicted RBP4.78□□□□□ -1.64
SCN3A-210ENST00000640652 LYZL4Q96KX0 146 aa4.78□□□□□ -1.64
SCN3A-210ENST00000640652 REPIN1Q9BWE0 567 aaKnown RBP4.78□□□□□ -1.64
SCN3A-210ENST00000640652 ZNF586Q9NXT0 402 aa4.78□□□□□ -1.64
SCN3A-210ENST00000640652 LOC102723996A0A087X1L8 192 aa4.78□□□□□ -1.64
SCN3A-210ENST00000640652 RAMP1O60894 148 aa4.78□□□□□ -1.64
SCN3A-210ENST00000640652 HAND1O96004 215 aa4.78□□□□□ -1.64
SCN3A-210ENST00000640652 ID4P47928 161 aa4.78□□□□□ -1.64
SCN3A-210ENST00000640652 CDC34P49427 236 aaPredicted RBP4.78□□□□□ -1.64
SCN3A-210ENST00000640652 BSXQ3C1V8 233 aa4.78□□□□□ -1.64
SCN3A-210ENST00000640652 NECAP1Q8NC96 275 aa4.78□□□□□ -1.64
SCN3A-210ENST00000640652 OR10G9Q8NGN4 311 aa4.78□□□□□ -1.64
SCN3A-210ENST00000640652 OR10G7Q8NGN6 311 aa4.78□□□□□ -1.64
SCN3A-210ENST00000640652 CT55Q8WUE5 264 aa4.78□□□□□ -1.64
SCN3A-210ENST00000640652 MUCL1Q96DR8 90 aa4.78□□□□□ -1.64
SCN3A-210ENST00000640652 C1orf147Q96MC9 270 aaPredicted RBP4.78□□□□□ -1.64
SCN3A-210ENST00000640652 RSG1Q9BU20 258 aa4.78□□□□□ -1.64
SCN3A-210ENST00000640652 PILRBQ9UKJ0 227 aa4.78□□□□□ -1.64
SCN3A-210ENST00000640652 CHD8Q9HCK8 2581 aa4.78□□□□□ -1.65
SCN3A-210ENST00000640652 CRYGSP22914 178 aa4.77□□□□□ -1.65
SCN3A-210ENST00000640652 ZNF816Q0VGE8 651 aaPredicted RBP4.77□□□□□ -1.65
SCN3A-210ENST00000640652 TMEM183BQ1AE95 376 aa4.77□□□□□ -1.65
SCN3A-210ENST00000640652 BAGE3Q86Y29 109 aa4.77□□□□□ -1.65
SCN3A-210ENST00000640652 BAGE2Q86Y30 109 aa4.77□□□□□ -1.65
SCN3A-210ENST00000640652 LYPD6BQ8NI32 183 aa4.77□□□□□ -1.65
SCN3A-210ENST00000640652 DECR2Q9NUI1 292 aa4.77□□□□□ -1.65
SCN3A-210ENST00000640652 A0A1W2PQM1 296 aa4.77□□□□□ -1.65
SCN3A-210ENST00000640652 PGA5P0DJD9 388 aa4.77□□□□□ -1.65
SCN3A-210ENST00000640652 RD3LP0DJH9 198 aa4.77□□□□□ -1.65
SCN3A-210ENST00000640652 BPIFB3P59826 476 aa4.77□□□□□ -1.65
SCN3A-210ENST00000640652 OR2M7Q8NG81 312 aa4.77□□□□□ -1.65
SCN3A-210ENST00000640652 COA4Q9NYJ1 87 aa4.77□□□□□ -1.65
SCN3A-210ENST00000640652 HS3ST3B1Q9Y662 390 aa4.77□□□□□ -1.65
SCN3A-210ENST00000640652 ST8SIA5O15466 376 aa4.77□□□□□ -1.65
SCN3A-210ENST00000640652 CXorf1O96002 111 aa4.77□□□□□ -1.65
SCN3A-210ENST00000640652 NGFP01138 241 aa4.77□□□□□ -1.65
SCN3A-210ENST00000640652 PATE4P0C8F1 98 aa4.77□□□□□ -1.65
SCN3A-210ENST00000640652 RHOBP62745 196 aa4.77□□□□□ -1.65
SCN3A-210ENST00000640652 GCM1Q9NP62 436 aa4.77□□□□□ -1.65
SCN3A-210ENST00000640652 SCGB2A1O75556 95 aa4.77□□□□□ -1.65
SCN3A-210ENST00000640652 SCTP09683 121 aa4.77□□□□□ -1.65
SCN3A-210ENST00000640652 GNG4P50150 75 aa4.77□□□□□ -1.65
SCN3A-210ENST00000640652 TPPP2P59282 170 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms