RNA–Protein interactions for RNA: ENST00000638120.1

CACNA1D-228, Transcript of calcium voltage-gated channel subunit alpha1 D, humanhuman

TSL 2 BASIC

Gene CACNA1D, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1D-228ENST00000638120 DUX4L5P0CJ88 424 aa10.19□□□□□ -0.78
CACNA1D-228ENST00000638120 DUX4L6P0CJ89 424 aa10.19□□□□□ -0.78
CACNA1D-228ENST00000638120 DUX4L7P0CJ90 424 aa10.19□□□□□ -0.78
CACNA1D-228ENST00000638120 LOXP28300 417 aaPredicted RBP10.19□□□□□ -0.78
CACNA1D-228ENST00000638120 UBA52P62987 128 aaKnown RBP10.19□□□□□ -0.78
CACNA1D-228ENST00000638120 SMCO1Q147U7 214 aa10.19□□□□□ -0.78
CACNA1D-228ENST00000638120 NMSQ5H8A3 153 aa10.19□□□□□ -0.78
CACNA1D-228ENST00000638120 FAM53AQ6NSI3 398 aaPredicted RBP10.19□□□□□ -0.78
CACNA1D-228ENST00000638120 DUX4L9Q6RFH8 374 aaPredicted RBP10.19□□□□□ -0.78
CACNA1D-228ENST00000638120 OR8H3Q8N146 312 aa10.19□□□□□ -0.78
CACNA1D-228ENST00000638120 ZBTB34Q8NCN2 500 aa10.19□□□□□ -0.78
CACNA1D-228ENST00000638120 OR4D5Q8NGN0 318 aa10.19□□□□□ -0.78
CACNA1D-228ENST00000638120 RFESDQ8TAC1 157 aa10.19□□□□□ -0.78
CACNA1D-228ENST00000638120 CCL13Q99616 98 aa10.19□□□□□ -0.78
CACNA1D-228ENST00000638120 SPIN2AQ99865 258 aa10.19□□□□□ -0.78
CACNA1D-228ENST00000638120 SPIN2BQ9BPZ2 258 aa10.19□□□□□ -0.78
CACNA1D-228ENST00000638120 TMEM204Q9BSN7 226 aa10.19□□□□□ -0.78
CACNA1D-228ENST00000638120 OR2D2Q9H210 308 aa10.19□□□□□ -0.78
CACNA1D-228ENST00000638120 ZFP57Q9NU63 452 aa10.19□□□□□ -0.78
CACNA1D-228ENST00000638120 DUX4Q9UBX2 424 aa10.19□□□□□ -0.78
CACNA1D-228ENST00000638120 JPT1Q9UK76 154 aa10.19□□□□□ -0.78
CACNA1D-228ENST00000638120 ANKHD1Q8IWZ3 2542 aaKnown RBP10.18□□□□□ -0.78
CACNA1D-228ENST00000638120 COL6A6A6NMZ7 2263 aa10.18□□□□□ -0.78
CACNA1D-228ENST00000638120 IGHV3-43A0A0B4J1X8 118 aa10.18□□□□□ -0.78
CACNA1D-228ENST00000638120 RPS10-NUDT3A0A1W2PQS6 291 aa10.18□□□□□ -0.78
CACNA1D-228ENST00000638120 MEX3AA1L020 520 aaKnown RBP10.18□□□□□ -0.78
CACNA1D-228ENST00000638120 CLEC18AA5D8T8 446 aa10.18□□□□□ -0.78
CACNA1D-228ENST00000638120 NKX6-3A6NJ46 265 aa10.18□□□□□ -0.78
CACNA1D-228ENST00000638120 TMEM178BH3BS89 294 aa10.18□□□□□ -0.78
CACNA1D-228ENST00000638120 K7EPK0 472 aa10.18□□□□□ -0.78
CACNA1D-228ENST00000638120 F2RL2O00254 374 aa10.18□□□□□ -0.78
CACNA1D-228ENST00000638120 SCGB1D2O95969 90 aa10.18□□□□□ -0.78
CACNA1D-228ENST00000638120 RLN2P04090 185 aa10.18□□□□□ -0.78
CACNA1D-228ENST00000638120 IGHV3-43DP0DP04 118 aa10.18□□□□□ -0.78
CACNA1D-228ENST00000638120 VDAC1P21796 283 aa10.18□□□□□ -0.78
CACNA1D-228ENST00000638120 NUP62P37198 522 aaPredicted RBP10.18□□□□□ -0.78
CACNA1D-228ENST00000638120 SWI5Q1ZZU3 235 aa10.18□□□□□ -0.78
CACNA1D-228ENST00000638120 ZNF672Q499Z4 452 aaPredicted RBP10.18□□□□□ -0.78
CACNA1D-228ENST00000638120 FOXRED2Q8IWF2 684 aa10.18□□□□□ -0.78
CACNA1D-228ENST00000638120 FAM71E2Q8N5Q1 922 aa10.18□□□□□ -0.78
CACNA1D-228ENST00000638120 FAM216BQ8N7L0 139 aa10.18□□□□□ -0.78
CACNA1D-228ENST00000638120 CLEC18CQ8NCF0 446 aa10.18□□□□□ -0.78
CACNA1D-228ENST00000638120 OR52M1Q8NGK5 317 aa10.18□□□□□ -0.78
CACNA1D-228ENST00000638120 FAM216AQ8WUB2 273 aa10.18□□□□□ -0.78
CACNA1D-228ENST00000638120 ARPC5LQ9BPX5 153 aa10.18□□□□□ -0.78
CACNA1D-228ENST00000638120 TMEM106BQ9NUM4 274 aa10.18□□□□□ -0.78
CACNA1D-228ENST00000638120 LSM5Q9Y4Y9 91 aaKnown RBP10.18□□□□□ -0.78
CACNA1D-228ENST00000638120 ROS1P08922 2347 aa10.18□□□□□ -0.78
CACNA1D-228ENST00000638120 NBASA2RRP1 2371 aa10.18□□□□□ -0.78
CACNA1D-228ENST00000638120 RNF212BA8MTL3 300 aa10.17□□□□□ -0.78
CACNA1D-228ENST00000638120 SPDEFO95238 335 aa10.17□□□□□ -0.78
CACNA1D-228ENST00000638120 SERPINE2P07093 398 aa10.17□□□□□ -0.78
CACNA1D-228ENST00000638120 CGB3P0DN86 165 aa10.17□□□□□ -0.78
CACNA1D-228ENST00000638120 CGB7P0DN87 165 aa10.17□□□□□ -0.78
CACNA1D-228ENST00000638120 EIF4EBP1Q13541 118 aaPredicted RBP10.17□□□□□ -0.78
CACNA1D-228ENST00000638120 C4orf17Q53FE4 359 aa10.17□□□□□ -0.78
CACNA1D-228ENST00000638120 CLLU1Q5K131 121 aa10.17□□□□□ -0.78
CACNA1D-228ENST00000638120 SCARB1Q8WTV0 552 aa10.17□□□□□ -0.78
CACNA1D-228ENST00000638120 ST8SIA2Q92186 375 aa10.17□□□□□ -0.78
CACNA1D-228ENST00000638120 C5orf30Q96GV9 206 aa10.17□□□□□ -0.78
CACNA1D-228ENST00000638120 CALYQ9NYX4 217 aa10.17□□□□□ -0.78
CACNA1D-228ENST00000638120 HCFC1P51610 2035 aa10.17□□□□□ -0.78
CACNA1D-228ENST00000638120 DSCAML1Q8TD84 2053 aa10.17□□□□□ -0.78
CACNA1D-228ENST00000638120 PPIAL4EA0A075B759 164 aa10.17□□□□□ -0.78
CACNA1D-228ENST00000638120 PPIAL4DF5H284 164 aa10.17□□□□□ -0.78
CACNA1D-228ENST00000638120 ADAM20O43506 726 aa10.17□□□□□ -0.78
CACNA1D-228ENST00000638120 PPIAL4FP0DN26 164 aa10.17□□□□□ -0.78
CACNA1D-228ENST00000638120 ALKAL2Q6UX46 152 aa10.17□□□□□ -0.78
CACNA1D-228ENST00000638120 MUC15Q8N387 334 aa10.17□□□□□ -0.78
CACNA1D-228ENST00000638120 ZNF808Q8N4W9 903 aaPredicted RBP10.17□□□□□ -0.78
CACNA1D-228ENST00000638120 EDARADDQ8WWZ3 215 aa10.17□□□□□ -0.78
CACNA1D-228ENST00000638120 CCL17Q92583 94 aa10.17□□□□□ -0.78
CACNA1D-228ENST00000638120 ZNF471Q9BX82 626 aaPredicted RBP10.17□□□□□ -0.78
CACNA1D-228ENST00000638120 GSX2Q9BZM3 304 aa10.17□□□□□ -0.78
CACNA1D-228ENST00000638120 PLEKHF2Q9H8W4 249 aa10.17□□□□□ -0.78
CACNA1D-228ENST00000638120 RAB9BQ9NP90 201 aa10.17□□□□□ -0.78
CACNA1D-228ENST00000638120 PPIAL4AQ9Y536 164 aa10.17□□□□□ -0.78
CACNA1D-228ENST00000638120 POMT1Q9Y6A1 747 aa10.17□□□□□ -0.78
CACNA1D-228ENST00000638120 ARFGEF3Q5TH69 2177 aa10.16□□□□□ -0.78
CACNA1D-228ENST00000638120 DIDO1Q9BTC0 2240 aaKnown RBP10.16□□□□□ -0.78
CACNA1D-228ENST00000638120 TRGV10A0A0A0MS01 117 aa10.16□□□□□ -0.78
CACNA1D-228ENST00000638120 E5RGE8 158 aa10.16□□□□□ -0.78
CACNA1D-228ENST00000638120 F5H0A9 414 aaPredicted RBP10.16□□□□□ -0.78
CACNA1D-228ENST00000638120 TMPRSS2O15393 492 aa10.16□□□□□ -0.78
CACNA1D-228ENST00000638120 ST8SIA3O43173 380 aa10.16□□□□□ -0.78
CACNA1D-228ENST00000638120 YPEL1O60688 119 aa10.16□□□□□ -0.78
CACNA1D-228ENST00000638120 IGKV1-39P01597 117 aa10.16□□□□□ -0.78
CACNA1D-228ENST00000638120 IGKV1D-39P04432 117 aa10.16□□□□□ -0.78
CACNA1D-228ENST00000638120 HKR1P10072 659 aa10.16□□□□□ -0.78
CACNA1D-228ENST00000638120 UQCRFS1P47985 274 aa10.16□□□□□ -0.78
CACNA1D-228ENST00000638120 LOXL3P58215 753 aa10.16□□□□□ -0.78
CACNA1D-228ENST00000638120 LTC4SQ16873 150 aa10.16□□□□□ -0.78
CACNA1D-228ENST00000638120 C17orf58Q2M2W7 97 aa10.16□□□□□ -0.78
CACNA1D-228ENST00000638120 MORN2Q502X0 79 aa10.16□□□□□ -0.78
CACNA1D-228ENST00000638120 THOC7Q6I9Y2 204 aaKnown RBP10.16□□□□□ -0.78
CACNA1D-228ENST00000638120 TCF23Q7RTU1 214 aa10.16□□□□□ -0.78
CACNA1D-228ENST00000638120 GALNT11Q8NCW6 608 aa10.16□□□□□ -0.78
CACNA1D-228ENST00000638120 ABHD14BQ96IU4 210 aa10.16□□□□□ -0.78
CACNA1D-228ENST00000638120 YPEL2Q96QA6 119 aa10.16□□□□□ -0.78
CACNA1D-228ENST00000638120 GNG12Q9UBI6 72 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms