RNA–Protein interactions for RNA: ENST00000638016.1

PNKP-230, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 109 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-230ENST00000638016 OR10A3P58181 314 aa13.97□□□□□ -0.17
PNKP-230ENST00000638016 LSAMPQ13449 338 aa13.97□□□□□ -0.17
PNKP-230ENST00000638016 TBCEQ15813 527 aaPredicted RBP13.97□□□□□ -0.17
PNKP-230ENST00000638016 RAB11BQ15907 218 aa13.97□□□□□ -0.17
PNKP-230ENST00000638016 TMEM30BQ3MIR4 351 aa13.97□□□□□ -0.17
PNKP-230ENST00000638016 HES5Q5TA89 166 aa13.97□□□□□ -0.17
PNKP-230ENST00000638016 ETV3LQ6ZN32 361 aa13.97□□□□□ -0.17
PNKP-230ENST00000638016 S1PR3Q99500 378 aa13.97□□□□□ -0.17
PNKP-230ENST00000638016 CHMP1AQ9HD42 196 aaPredicted RBP13.97□□□□□ -0.17
PNKP-230ENST00000638016 ST8SIA5O15466 376 aa13.96□□□□□ -0.17
PNKP-230ENST00000638016 LANCL1O43813 399 aa13.96□□□□□ -0.17
PNKP-230ENST00000638016 PF4P02776 101 aa13.96□□□□□ -0.17
PNKP-230ENST00000638016 SLC2A2P11168 524 aaPredicted RBP13.96□□□□□ -0.17
PNKP-230ENST00000638016 ARSBP15848 533 aa13.96□□□□□ -0.17
PNKP-230ENST00000638016 CD33P20138 364 aa13.96□□□□□ -0.17
PNKP-230ENST00000638016 CNTFRP26992 372 aa13.96□□□□□ -0.17
PNKP-230ENST00000638016 HSPA13P48723 471 aa13.96□□□□□ -0.17
PNKP-230ENST00000638016 TMEM50BP56557 158 aa13.96□□□□□ -0.17
PNKP-230ENST00000638016 ZNF880Q6PDB4 577 aa13.96□□□□□ -0.17
PNKP-230ENST00000638016 ZNF367Q7RTV3 350 aa13.96□□□□□ -0.17
PNKP-230ENST00000638016 STPG2Q8N412 459 aa13.96□□□□□ -0.17
PNKP-230ENST00000638016 GALMQ96C23 342 aa13.96□□□□□ -0.17
PNKP-230ENST00000638016 ABCG5Q9H222 651 aa13.96□□□□□ -0.17
PNKP-230ENST00000638016 IFI27L2Q9H2X8 130 aa13.96□□□□□ -0.17
PNKP-230ENST00000638016 RAB9BQ9NP90 201 aa13.96□□□□□ -0.17
PNKP-230ENST00000638016 ACOT13Q9NPJ3 140 aa13.96□□□□□ -0.17
PNKP-230ENST00000638016 LIN7CQ9NUP9 197 aaKnown RBP13.96□□□□□ -0.17
PNKP-230ENST00000638016 PLEKHJ1Q9NW61 149 aa13.96□□□□□ -0.17
PNKP-230ENST00000638016 SAA2-SAA4A0A096LPE2 208 aa13.95□□□□□ -0.18
PNKP-230ENST00000638016 YPEL1O60688 119 aa13.95□□□□□ -0.18
PNKP-230ENST00000638016 ARL6IP5O75915 188 aa13.95□□□□□ -0.18
PNKP-230ENST00000638016 SAA2P0DJI9 122 aaPredicted RBP13.95□□□□□ -0.18
PNKP-230ENST00000638016 VEGFCP49767 419 aa13.95□□□□□ -0.18
PNKP-230ENST00000638016 RPL23AP62750 156 aaKnown RBP13.95□□□□□ -0.18
PNKP-230ENST00000638016 HTD2P86397 168 aa13.95□□□□□ -0.18
PNKP-230ENST00000638016 TRAM1Q15629 374 aa13.95□□□□□ -0.18
PNKP-230ENST00000638016 FOXB2Q5VYV0 432 aa13.95□□□□□ -0.18
PNKP-230ENST00000638016 C8orf86Q6ZUL3 223 aa13.95□□□□□ -0.18
PNKP-230ENST00000638016 OR2W3Q7Z3T1 314 aa13.95□□□□□ -0.18
PNKP-230ENST00000638016 ZNF554Q86TJ5 538 aa13.95□□□□□ -0.18
PNKP-230ENST00000638016 FAM71E2Q8N5Q1 922 aa13.95□□□□□ -0.18
PNKP-230ENST00000638016 CHPT1Q8WUD6 406 aa13.95□□□□□ -0.18
PNKP-230ENST00000638016 ARHGAP5-AS1Q96IT6 56 aa13.95□□□□□ -0.18
PNKP-230ENST00000638016 DUX3Q96PT4 197 aa13.95□□□□□ -0.18
PNKP-230ENST00000638016 YPEL2Q96QA6 119 aa13.95□□□□□ -0.18
PNKP-230ENST00000638016 NABP2Q9BQ15 211 aa13.95□□□□□ -0.18
PNKP-230ENST00000638016 OR1A1Q9P1Q5 309 aa13.95□□□□□ -0.18
PNKP-230ENST00000638016 A0A0B4J203 849 aa13.94□□□□□ -0.18
PNKP-230ENST00000638016 TMEM272A0A1B0GTI8 110 aa13.94□□□□□ -0.18
PNKP-230ENST00000638016 SMIM30A4D0T7 59 aa13.94□□□□□ -0.18
PNKP-230ENST00000638016 TXNL1O43396 289 aa13.94□□□□□ -0.18
PNKP-230ENST00000638016 PSMA1P25786 263 aaKnown RBP13.94□□□□□ -0.18
PNKP-230ENST00000638016 RPL39P5Q59GN2 51 aa13.94□□□□□ -0.18
PNKP-230ENST00000638016 PLAC9Q5JTB6 97 aa13.94□□□□□ -0.18
PNKP-230ENST00000638016 FAM89BQ8N5H3 189 aa13.94□□□□□ -0.18
PNKP-230ENST00000638016 WFDC9Q8NEX5 89 aa13.94□□□□□ -0.18
PNKP-230ENST00000638016 FAM3DQ96BQ1 224 aa13.94□□□□□ -0.18
PNKP-230ENST00000638016 RAB26Q9ULW5 256 aa13.94□□□□□ -0.18
PNKP-230ENST00000638016 V9GY05 133 aa13.94□□□□□ -0.18
PNKP-230ENST00000638016 LDLRAD4O15165 306 aa13.93□□□□□ -0.18
PNKP-230ENST00000638016 SCTP09683 121 aa13.93□□□□□ -0.18
PNKP-230ENST00000638016 MMDQ15546 238 aa13.93□□□□□ -0.18
PNKP-230ENST00000638016 C2orf76Q3KRA6 126 aa13.93□□□□□ -0.18
PNKP-230ENST00000638016 MOGAT2Q3SYC2 334 aa13.93□□□□□ -0.18
PNKP-230ENST00000638016 STEAP3Q658P3 488 aa13.93□□□□□ -0.18
PNKP-230ENST00000638016 ZNF833PQ6ZTB9 187 aa13.93□□□□□ -0.18
PNKP-230ENST00000638016 FOXRED2Q8IWF2 684 aa13.93□□□□□ -0.18
PNKP-230ENST00000638016 OR2AK2Q8NG84 335 aa13.93□□□□□ -0.18
PNKP-230ENST00000638016 ABHD14BQ96IU4 210 aa13.93□□□□□ -0.18
PNKP-230ENST00000638016 ZNF251Q9BRH9 671 aa13.93□□□□□ -0.18
PNKP-230ENST00000638016 URM1Q9BTM9 101 aaKnown RBP13.93□□□□□ -0.18
PNKP-230ENST00000638016 PECRQ9BY49 303 aa13.93□□□□□ -0.18
PNKP-230ENST00000638016 AURKAIP1Q9NWT8 199 aaPredicted RBP13.93□□□□□ -0.18
PNKP-230ENST00000638016 ABRACLQ9P1F3 81 aa13.93□□□□□ -0.18
PNKP-230ENST00000638016 RPLP1P05386 114 aaKnown RBP13.92□□□□□ -0.18
PNKP-230ENST00000638016 HLA-DRB3P79483 266 aa13.92□□□□□ -0.18
PNKP-230ENST00000638016 GLDNQ6ZMI3 551 aaPredicted RBP13.92□□□□□ -0.18
PNKP-230ENST00000638016 NR2C2APQ86WQ0 139 aa13.92□□□□□ -0.18
PNKP-230ENST00000638016 LINC00482Q8N8I6 264 aa13.92□□□□□ -0.18
PNKP-230ENST00000638016 KLHL30-AS1Q8NEE0 82 aa13.92□□□□□ -0.18
PNKP-230ENST00000638016 RASL11BQ9BPW5 248 aa13.92□□□□□ -0.18
PNKP-230ENST00000638016 NDUFB11Q9NX14 153 aa13.92□□□□□ -0.18
PNKP-230ENST00000638016 SLC23A1Q9UHI7 598 aa13.92□□□□□ -0.18
PNKP-230ENST00000638016 BLOC1S6Q9UL45 172 aa13.92□□□□□ -0.18
PNKP-230ENST00000638016 TRBV6-6A0A0A6YYG2 114 aa13.91□□□□□ -0.18
PNKP-230ENST00000638016 IGKV1-6A0A0C4DH72 117 aa13.91□□□□□ -0.18
PNKP-230ENST00000638016 NUDT19A8MXV4 375 aa13.91□□□□□ -0.18
PNKP-230ENST00000638016 AP4M1O00189 453 aa13.91□□□□□ -0.18
PNKP-230ENST00000638016 SNRPBP14678 240 aaKnown RBP13.91□□□□□ -0.18
PNKP-230ENST00000638016 ACTBP60709 375 aa13.91□□□□□ -0.18
PNKP-230ENST00000638016 FAM131AQ6UXB0 335 aa13.91□□□□□ -0.18
PNKP-230ENST00000638016 MRPL41Q8IXM3 137 aaKnown RBP13.91□□□□□ -0.18
PNKP-230ENST00000638016 Q9N2K0 584 aa13.91□□□□□ -0.18
PNKP-230ENST00000638016 STEAP1Q9UHE8 339 aa13.91□□□□□ -0.18
PNKP-230ENST00000638016 KCNK7Q9Y2U2 307 aa13.91□□□□□ -0.18
PNKP-230ENST00000638016 DENRO43583 198 aaKnown RBP13.9□□□□□ -0.18
PNKP-230ENST00000638016 RGS11O94810 467 aa13.9□□□□□ -0.18
PNKP-230ENST00000638016 CD3GP09693 182 aa13.9□□□□□ -0.18
PNKP-230ENST00000638016 HOXD3P31249 432 aaPredicted RBP13.9□□□□□ -0.18
PNKP-230ENST00000638016 SOX6P35712 828 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms