RNA–Protein interactions for RNA: ENST00000637450.1

CLN6-220, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3

Gene CLN6, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-220ENST00000637450 YPEL2Q96QA6 119 aa14.39□□□□□ -0.11
CLN6-220ENST00000637450 PRR25Q96S07 402 aa14.39□□□□□ -0.11
CLN6-220ENST00000637450 NABP2Q9BQ15 211 aa14.39□□□□□ -0.11
CLN6-220ENST00000637450 MRPL20Q9BYC9 149 aaKnown RBP14.39□□□□□ -0.11
CLN6-220ENST00000637450 KLK15Q9H2R5 256 aa14.39□□□□□ -0.11
CLN6-220ENST00000637450 OR51J1Q9H342 316 aa14.39□□□□□ -0.11
CLN6-220ENST00000637450 PLCXD1Q9NUJ7 323 aa14.39□□□□□ -0.11
CLN6-220ENST00000637450 LRRC42Q9Y546 428 aa14.39□□□□□ -0.11
CLN6-220ENST00000637450 G3V318 75 aa14.38□□□□□ -0.11
CLN6-220ENST00000637450 I3L521 148 aa14.38□□□□□ -0.11
CLN6-220ENST00000637450 RGS11O94810 467 aa14.38□□□□□ -0.11
CLN6-220ENST00000637450 IGLV1-40P01703 118 aa14.38□□□□□ -0.11
CLN6-220ENST00000637450 HLA-DRB1P01911 266 aa14.38□□□□□ -0.11
CLN6-220ENST00000637450 CNTFRP26992 372 aa14.38□□□□□ -0.11
CLN6-220ENST00000637450 MAPK3P27361 379 aaPredicted RBP14.38□□□□□ -0.11
CLN6-220ENST00000637450 ECI1P42126 302 aa14.38□□□□□ -0.11
CLN6-220ENST00000637450 TMEM65Q6PI78 240 aa14.38□□□□□ -0.11
CLN6-220ENST00000637450 ZNF833PQ6ZTB9 187 aa14.38□□□□□ -0.11
CLN6-220ENST00000637450 NANOGP1Q8N7R0 232 aa14.38□□□□□ -0.11
CLN6-220ENST00000637450 ZNF491Q8N8L2 437 aa14.38□□□□□ -0.11
CLN6-220ENST00000637450 FBLIM1Q8WUP2 373 aa14.38□□□□□ -0.11
CLN6-220ENST00000637450 GALMQ96C23 342 aa14.38□□□□□ -0.11
CLN6-220ENST00000637450 ZNF251Q9BRH9 671 aa14.38□□□□□ -0.11
CLN6-220ENST00000637450 ANKRD60Q9BZ19 345 aa14.38□□□□□ -0.11
CLN6-220ENST00000637450 CST11Q9H112 138 aa14.38□□□□□ -0.11
CLN6-220ENST00000637450 WSB1Q9Y6I7 421 aa14.38□□□□□ -0.11
CLN6-220ENST00000637450 IGHV7-81A0A0B4J1V7 117 aa14.37□□□□□ -0.11
CLN6-220ENST00000637450 MYL12BO14950 172 aa14.37□□□□□ -0.11
CLN6-220ENST00000637450 NBR2O15453 112 aa14.37□□□□□ -0.11
CLN6-220ENST00000637450 GNAO1P09471 354 aa14.37□□□□□ -0.11
CLN6-220ENST00000637450 UBBP0CG47 229 aa14.37□□□□□ -0.11
CLN6-220ENST00000637450 CHATP28329 748 aa14.37□□□□□ -0.11
CLN6-220ENST00000637450 OR3A3P47888 321 aa14.37□□□□□ -0.11
CLN6-220ENST00000637450 RUNX1Q01196 453 aa14.37□□□□□ -0.11
CLN6-220ENST00000637450 ZNF260Q3ZCT1 412 aa14.37□□□□□ -0.11
CLN6-220ENST00000637450 NKAPLQ5M9Q1 402 aa14.37□□□□□ -0.11
CLN6-220ENST00000637450 AHSA2Q719I0 299 aa14.37□□□□□ -0.11
CLN6-220ENST00000637450 C8orf59Q8N0T1 100 aaPredicted RBP14.37□□□□□ -0.11
CLN6-220ENST00000637450 NPBQ8NG41 125 aa14.37□□□□□ -0.11
CLN6-220ENST00000637450 OR1N2Q8NGR9 330 aa14.37□□□□□ -0.11
CLN6-220ENST00000637450 NEDD4LQ96PU5 975 aa14.37□□□□□ -0.11
CLN6-220ENST00000637450 SULT4A1Q9BR01 284 aa14.37□□□□□ -0.11
CLN6-220ENST00000637450 GNB4Q9HAV0 340 aa14.37□□□□□ -0.11
CLN6-220ENST00000637450 VSIG4Q9Y279 399 aa14.37□□□□□ -0.11
CLN6-220ENST00000637450 ATP6V0E1O15342 81 aa14.36□□□□□ -0.11
CLN6-220ENST00000637450 INSL4Q14641 139 aa14.36□□□□□ -0.11
CLN6-220ENST00000637450 HMGN3Q15651 99 aa14.36□□□□□ -0.11
CLN6-220ENST00000637450 C5orf64Q2M2E5 130 aa14.36□□□□□ -0.11
CLN6-220ENST00000637450 LIN54Q6MZP7 749 aa14.36□□□□□ -0.11
CLN6-220ENST00000637450 MINDY2Q8NBR6 621 aa14.36□□□□□ -0.11
CLN6-220ENST00000637450 BPIFB6Q8NFQ5 453 aa14.36□□□□□ -0.11
CLN6-220ENST00000637450 FAAP24Q9BTP7 215 aa14.36□□□□□ -0.11
CLN6-220ENST00000637450 FKBP14Q9NWM8 211 aa14.36□□□□□ -0.11
CLN6-220ENST00000637450 U3KQK5 164 aa14.36□□□□□ -0.11
CLN6-220ENST00000637450 SAA2-SAA4A0A096LPE2 208 aa14.35□□□□□ -0.11
CLN6-220ENST00000637450 TRAV41A0A0B4J266 112 aa14.35□□□□□ -0.11
CLN6-220ENST00000637450 NDUFA3O95167 84 aa14.35□□□□□ -0.11
CLN6-220ENST00000637450 OR8U8P0C7N1 319 aa14.35□□□□□ -0.11
CLN6-220ENST00000637450 SAA2P0DJI9 122 aaPredicted RBP14.35□□□□□ -0.11
CLN6-220ENST00000637450 RAB9AP51151 201 aa14.35□□□□□ -0.11
CLN6-220ENST00000637450 INSL3P51460 131 aa14.35□□□□□ -0.11
CLN6-220ENST00000637450 RPS27AP62979 156 aaKnown RBP14.35□□□□□ -0.11
CLN6-220ENST00000637450 ACSM3Q53FZ2 586 aa14.35□□□□□ -0.11
CLN6-220ENST00000637450 C1orf100Q5SVJ3 147 aa14.35□□□□□ -0.11
CLN6-220ENST00000637450 ASPHD1Q5U4P2 390 aa14.35□□□□□ -0.11
CLN6-220ENST00000637450 OR10K2Q6IF99 312 aa14.35□□□□□ -0.11
CLN6-220ENST00000637450 LRRTM1Q86UE6 522 aa14.35□□□□□ -0.11
CLN6-220ENST00000637450 MS4A15Q8N5U1 240 aa14.35□□□□□ -0.11
CLN6-220ENST00000637450 OR2AK2Q8NG84 335 aa14.35□□□□□ -0.11
CLN6-220ENST00000637450 IFI27L2Q9H2X8 130 aa14.35□□□□□ -0.11
CLN6-220ENST00000637450 PARP11Q9NR21 331 aa14.35□□□□□ -0.11
CLN6-220ENST00000637450 ERGIC3Q9Y282 383 aa14.35□□□□□ -0.11
CLN6-220ENST00000637450 HUWE1Q7Z6Z7 4374 aaKnown RBP14.34□□□□□ -0.11
CLN6-220ENST00000637450 HTR2CP28335 458 aa14.34□□□□□ -0.11
CLN6-220ENST00000637450 BLVRBP30043 206 aaPredicted RBP14.34□□□□□ -0.11
CLN6-220ENST00000637450 GNB1P62873 340 aa14.34□□□□□ -0.11
CLN6-220ENST00000637450 ZNF616Q08AN1 781 aa14.34□□□□□ -0.11
CLN6-220ENST00000637450 FAM27D1Q5T7N8 215 aa14.34□□□□□ -0.11
CLN6-220ENST00000637450 GLT8D1Q68CQ7 371 aa14.34□□□□□ -0.11
CLN6-220ENST00000637450 FAM71F2Q6NXP2 309 aa14.34□□□□□ -0.11
CLN6-220ENST00000637450 C6orf201Q7Z4U5 140 aa14.34□□□□□ -0.11
CLN6-220ENST00000637450 ABRACLQ9P1F3 81 aa14.34□□□□□ -0.11
CLN6-220ENST00000637450 KIAA1456Q9P272 454 aa14.34□□□□□ -0.11
CLN6-220ENST00000637450 ZNF256Q9Y2P7 627 aaPredicted RBP14.34□□□□□ -0.11
CLN6-220ENST00000637450 NAPSAO96009 420 aa14.33□□□□□ -0.12
CLN6-220ENST00000637450 CD37P11049 281 aa14.33□□□□□ -0.12
CLN6-220ENST00000637450 RNLSQ5VYX0 342 aa14.33□□□□□ -0.12
CLN6-220ENST00000637450 ZNF880Q6PDB4 577 aa14.33□□□□□ -0.12
CLN6-220ENST00000637450 KCNG3Q8TAE7 436 aa14.33□□□□□ -0.12
CLN6-220ENST00000637450 PHYHIPQ92561 330 aa14.33□□□□□ -0.12
CLN6-220ENST00000637450 OR5B12Q96R08 314 aa14.33□□□□□ -0.12
CLN6-220ENST00000637450 TM2D1Q9BX74 207 aa14.33□□□□□ -0.12
CLN6-220ENST00000637450 TMEM59Q9BXS4 323 aa14.33□□□□□ -0.12
CLN6-220ENST00000637450 PIPOXQ9P0Z9 390 aa14.33□□□□□ -0.12
CLN6-220ENST00000637450 STEAP1Q9UHE8 339 aa14.33□□□□□ -0.12
CLN6-220ENST00000637450 DNAH7Q8WXX0 4024 aa14.33□□□□□ -0.12
CLN6-220ENST00000637450 STAB2Q8WWQ8 2551 aa14.32□□□□□ -0.12
CLN6-220ENST00000637450 RAB29O14966 203 aa14.32□□□□□ -0.12
CLN6-220ENST00000637450 ST8SIA5O15466 376 aa14.32□□□□□ -0.12
CLN6-220ENST00000637450 CT45A6P0DMU7 189 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms