RNA–Protein interactions for RNA: ENST00000636549.1

CACNA1A-227, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,792 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-227ENST00000636549 CACFD1Q9UGQ2 172 aa15.51■□□□□ 0.07
CACNA1A-227ENST00000636549 MBPP02686 304 aaPredicted RBP15.51■□□□□ 0.07
CACNA1A-227ENST00000636549 EFNB2P52799 333 aa15.51■□□□□ 0.07
CACNA1A-227ENST00000636549 ZDHHC22Q8N966 263 aa15.51■□□□□ 0.07
CACNA1A-227ENST00000636549 WNT5BQ9H1J7 359 aa15.51■□□□□ 0.07
CACNA1A-227ENST00000636549 GEMIN7Q9H840 131 aaKnown RBP15.51■□□□□ 0.07
CACNA1A-227ENST00000636549 AKIP1Q9NQ31 210 aa15.51■□□□□ 0.07
CACNA1A-227ENST00000636549 SOX21Q9Y651 276 aaPredicted RBP15.51■□□□□ 0.07
CACNA1A-227ENST00000636549 CISD3P0C7P0 127 aa15.51■□□□□ 0.07
CACNA1A-227ENST00000636549 RND2P52198 227 aa15.51■□□□□ 0.07
CACNA1A-227ENST00000636549 ZNF707Q96C28 371 aaPredicted RBP15.51■□□□□ 0.07
CACNA1A-227ENST00000636549 LINC01587Q99440 93 aa15.51■□□□□ 0.07
CACNA1A-227ENST00000636549 TSPAN13O95857 204 aa15.5■□□□□ 0.07
CACNA1A-227ENST00000636549 RNASE4P34096 147 aaKnown RBP15.5■□□□□ 0.07
CACNA1A-227ENST00000636549 CDC20Q12834 499 aa15.5■□□□□ 0.07
CACNA1A-227ENST00000636549 MMP26Q9NRE1 261 aa15.5■□□□□ 0.07
CACNA1A-227ENST00000636549 TMEFF2Q9UIK5 374 aaPredicted RBP15.5■□□□□ 0.07
CACNA1A-227ENST00000636549 HSPB8Q9UJY1 196 aa15.5■□□□□ 0.07
CACNA1A-227ENST00000636549 MPC1Q9Y5U8 109 aa15.5■□□□□ 0.07
CACNA1A-227ENST00000636549 CCDC88CQ9P219 2028 aa15.5■□□□□ 0.07
CACNA1A-227ENST00000636549 TCRBV5S2A0A599 114 aa15.5■□□□□ 0.07
CACNA1A-227ENST00000636549 UCP2P55851 309 aa15.5■□□□□ 0.07
CACNA1A-227ENST00000636549 DLK1P80370 383 aa15.5■□□□□ 0.07
CACNA1A-227ENST00000636549 PLSCR2Q9NRY7 297 aa15.5■□□□□ 0.07
CACNA1A-227ENST00000636549 SCN2AQ99250 2005 aa15.5■□□□□ 0.07
CACNA1A-227ENST00000636549 NRN1LQ496H8 165 aa15.5■□□□□ 0.07
CACNA1A-227ENST00000636549 TRGV3P03979 118 aa15.5■□□□□ 0.07
CACNA1A-227ENST00000636549 NPFFR1Q9GZQ6 430 aa15.5■□□□□ 0.07
CACNA1A-227ENST00000636549 ANOS1P23352 680 aa15.5■□□□□ 0.07
CACNA1A-227ENST00000636549 SLC16A13Q7RTY0 426 aa15.5■□□□□ 0.07
CACNA1A-227ENST00000636549 BPIFA4PQ86YQ2 179 aa15.5■□□□□ 0.07
CACNA1A-227ENST00000636549 MRPL24Q96A35 216 aaKnown RBP15.5■□□□□ 0.07
CACNA1A-227ENST00000636549 RBFOX3A6NFN3 312 aa15.49■□□□□ 0.07
CACNA1A-227ENST00000636549 LIPT2A6NK58 231 aa15.49■□□□□ 0.07
CACNA1A-227ENST00000636549 UCNP55089 124 aa15.49■□□□□ 0.07
CACNA1A-227ENST00000636549 CD69Q07108 199 aa15.49■□□□□ 0.07
CACNA1A-227ENST00000636549 SRSF7Q16629 238 aaKnown RBP eCLIP15.49■□□□□ 0.07
CACNA1A-227ENST00000636549 LINC01465Q8N7H1 131 aa15.49■□□□□ 0.07
CACNA1A-227ENST00000636549 LSMEM1Q8N8F7 131 aa15.49■□□□□ 0.07
CACNA1A-227ENST00000636549 SP9P0CG40 484 aa15.49■□□□□ 0.07
CACNA1A-227ENST00000636549 HLA-DRB3P79483 266 aa15.49■□□□□ 0.07
CACNA1A-227ENST00000636549 NUBPLQ8TB37 319 aa15.49■□□□□ 0.07
CACNA1A-227ENST00000636549 HIST1H4GQ99525 98 aa15.49■□□□□ 0.07
CACNA1A-227ENST00000636549 GSX2Q9BZM3 304 aa15.49■□□□□ 0.07
CACNA1A-227ENST00000636549 PLCH1Q4KWH8 1693 aa15.49■□□□□ 0.07
CACNA1A-227ENST00000636549 HMX2A2RU54 273 aa15.49■□□□□ 0.07
CACNA1A-227ENST00000636549 MVDP53602 400 aa15.49■□□□□ 0.07
CACNA1A-227ENST00000636549 KLF9Q13886 244 aaPredicted RBP15.49■□□□□ 0.07
CACNA1A-227ENST00000636549 ADTRPQ96IZ2 230 aa15.49■□□□□ 0.07
CACNA1A-227ENST00000636549 HYPMO75409 117 aa15.49■□□□□ 0.07
CACNA1A-227ENST00000636549 KBTBD11O94819 623 aa15.49■□□□□ 0.07
CACNA1A-227ENST00000636549 TMEM50BP56557 158 aa15.49■□□□□ 0.07
CACNA1A-227ENST00000636549 TEPPQ6URK8 271 aa15.49■□□□□ 0.07
CACNA1A-227ENST00000636549 PRNDQ9UKY0 176 aa15.49■□□□□ 0.07
CACNA1A-227ENST00000636549 TDRD6O60522 2096 aaKnown RBP15.49■□□□□ 0.07
CACNA1A-227ENST00000636549 TRAV12-3A0A0B4J271 114 aa15.48■□□□□ 0.07
CACNA1A-227ENST00000636549 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.48■□□□□ 0.07
CACNA1A-227ENST00000636549 CDC42EP2O14613 210 aa15.48■□□□□ 0.07
CACNA1A-227ENST00000636549 CITED2Q99967 270 aaPredicted RBP15.48■□□□□ 0.07
CACNA1A-227ENST00000636549 TRGV2A0A075B6R0 118 aa15.48■□□□□ 0.07
CACNA1A-227ENST00000636549 IGSF11Q5DX21 431 aa15.48■□□□□ 0.07
CACNA1A-227ENST00000636549 CTSDP07339 412 aaPredicted RBP15.48■□□□□ 0.07
CACNA1A-227ENST00000636549 CST2P09228 141 aa15.48■□□□□ 0.07
CACNA1A-227ENST00000636549 RPL27AP46776 148 aaKnown RBP15.48■□□□□ 0.07
CACNA1A-227ENST00000636549 FOXB2Q5VYV0 432 aa15.48■□□□□ 0.07
CACNA1A-227ENST00000636549 SLC52A3Q9NQ40 469 aa15.48■□□□□ 0.07
CACNA1A-227ENST00000636549 HSPB7Q9UBY9 170 aa15.48■□□□□ 0.07
CACNA1A-227ENST00000636549 A0A1W2PS18 150 aa15.48■□□□□ 0.07
CACNA1A-227ENST00000636549 RPS4Y2Q8TD47 263 aa15.48■□□□□ 0.07
CACNA1A-227ENST00000636549 TMEM38BQ9NVV0 291 aa15.48■□□□□ 0.07
CACNA1A-227ENST00000636549 DTX4Q9Y2E6 619 aa15.48■□□□□ 0.07
CACNA1A-227ENST00000636549 TCRBV5S1A1TA0A578 114 aa15.47■□□□□ 0.07
CACNA1A-227ENST00000636549 EFNB1P98172 346 aa15.47■□□□□ 0.07
CACNA1A-227ENST00000636549 VGLL1Q99990 258 aa15.47■□□□□ 0.07
CACNA1A-227ENST00000636549 UQCC2Q9BRT2 126 aa15.47■□□□□ 0.07
CACNA1A-227ENST00000636549 WNT10AQ9GZT5 417 aa15.47■□□□□ 0.07
CACNA1A-227ENST00000636549 TMEM191AQ9H0A3 160 aa15.47■□□□□ 0.07
CACNA1A-227ENST00000636549 SIAH2O43255 324 aa15.47■□□□□ 0.07
CACNA1A-227ENST00000636549 HBZP02008 142 aa15.47■□□□□ 0.07
CACNA1A-227ENST00000636549 FAM201AQ5SY85 155 aa15.47■□□□□ 0.07
CACNA1A-227ENST00000636549 ZNF324BQ6AW86 544 aaPredicted RBP15.47■□□□□ 0.07
CACNA1A-227ENST00000636549 ZAR1Q86SH2 424 aa15.47■□□□□ 0.07
CACNA1A-227ENST00000636549 SLC25A42Q86VD7 318 aa15.47■□□□□ 0.07
CACNA1A-227ENST00000636549 NKX2-2O95096 273 aa15.47■□□□□ 0.07
CACNA1A-227ENST00000636549 CD24P25063 80 aa15.47■□□□□ 0.07
CACNA1A-227ENST00000636549 ABHD12Q8N2K0 398 aa15.47■□□□□ 0.07
CACNA1A-227ENST00000636549 TRAV1-2A0A0B4J238 106 aa15.47■□□□□ 0.07
CACNA1A-227ENST00000636549 OR10J1P30954 320 aa15.47■□□□□ 0.07
CACNA1A-227ENST00000636549 SELENOTP62341 195 aa15.47■□□□□ 0.07
CACNA1A-227ENST00000636549 WFIKKN1Q96NZ8 548 aa15.47■□□□□ 0.07
CACNA1A-227ENST00000636549 BCL2L10Q9HD36 194 aa15.47■□□□□ 0.07
CACNA1A-227ENST00000636549 C9orf40Q8IXQ3 194 aa15.46■□□□□ 0.07
CACNA1A-227ENST00000636549 FOXJ2Q9P0K8 574 aa15.46■□□□□ 0.07
CACNA1A-227ENST00000636549 RCC1P18754 421 aaPredicted RBP15.46■□□□□ 0.07
CACNA1A-227ENST00000636549 MFAP2P55001 183 aa15.46■□□□□ 0.07
CACNA1A-227ENST00000636549 RNF115Q9Y4L5 304 aa15.46■□□□□ 0.07
CACNA1A-227ENST00000636549 SPAG8Q99932 426 aaPredicted RBP15.46■□□□□ 0.07
CACNA1A-227ENST00000636549 PGPA6NDG6 321 aa15.46■□□□□ 0.07
CACNA1A-227ENST00000636549 ZNF418Q8TF45 676 aaPredicted RBP15.46■□□□□ 0.07
CACNA1A-227ENST00000636549 TMEM101Q96IK0 257 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms